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The map label for this gene is yngJ [H]

Identifier: 73541254

GI number: 73541254

Start: 1684644

End: 1685723

Strand: Direct

Name: yngJ [H]

Synonym: Reut_A1564

Alternate gene names: 73541254

Gene position: 1684644-1685723 (Clockwise)

Preceding gene: 73541253

Following gene: 73541255

Centisome position: 44.26

GC content: 70.0

Gene sequence:

>1080_bases
ATGGATTTCACTTTCACCGAAGAGCAGGAGCAGTTTGCCGAAGCGATCCGGCGCTTCCTGATGACCGAGATGACGCCCGA
GCTGACCCGCGAGCTGTGGGCCACCGAATCTGGCCGCTCCGATGCGCTGTGGCGCCAGCTTGCCGATCAGGGCATGGCGG
CGTTGATGGTGCCGCAGGAGCAGGGCGGGCTGGGACTGGGCGAGGTCGAATGGGCGCCACTGGCGCAGGCGTGCGGATAT
TTCGCGCTGCCCGAGCCCTTGCTCGACACCGCGCTGGTGGCGGCGGCCCTGTTGCGCGATGCGTTGCCCCTTGTGCAAGA
CGACGCGGCGCGCGACCGTTGCACGACGCTGCTGGAGCGCATTGCTGGCGGCCATGCGCGCATCGCGGTGGCGCATCCGC
AGGAGCTGCTGGTGGCCGACGCCCATGTGGCCGACGCCATCCTGTGCGAGCACGAAGGCGCGGTGCACTTGCTGCGGCGG
GACGAGGCCGTGCTGACGCCGCGCGCGGGGCTCGATCCTTCGCGCCGCCTGTTCGAACTGGCCTGGACCCATTCCGAACA
GACGCAACTGATTCCCGCGGCGGCCGCCGCTACCGCCGGCCTGTGGGACGACGCGCTGAACCGCGGCGCGCTCGGCGTGG
CGGCACAACAGCTAGGCCTGACGCAGCGCATGCTCGATCTTGCGATCGACTACAGCGCGCAGCGCAAGCAGTTCGGCAAG
GCCATTGGCACCAATCAGGCGGTCAAGCACCTGCTGGCGGACGTGGCGATCCAGCTCGAGTTCGCCAAGCCGGTCCTGCA
CCGGGCCGCCAGTGCGCTGGCGCAAGGCCTGTCGCAGGCGGGCCTGCATGTGTCGCATGCCCGCGTGGCGGCCGCGCGCT
GCGCGTGGTCCGCCGCGCGCCAGGCCATCCAGGTGCATGGCGCGATGGGCTACACGTGGGAACTCGACCTGCAGATCTTT
ACCAAGCGGGCCTGGGCCCTGGCGGGAAGCTGGGGCGACCGGGCCTTCCACAAGGCGCGCCTGGGCGCGCACATCCTGGA
TGGCGCGCATGACATCGGCGCCGGCGCCACCTTTGCCTGA

Upstream 100 bases:

>100_bases
CTACGCCGGTACCAACGAGATCCAGCGCAATATCGTCGCGGAGCGCCTGCTCGGCATGCCGCGCGCGTAACGAGAAAAAC
GGCATCCGAGGGGAAACACG

Downstream 100 bases:

>100_bases
ATCCGAAGAGAGTCCCAAGAGACATGACCATGAAACACGCCTATATCGTTGACGCCCTGCGCACGCCCACCGGCCGCCGC
AAGGGCGGACTGTCGCACAT

Product: Acyl-CoA dehydrogenase, C-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MDFTFTEEQEQFAEAIRRFLMTEMTPELTRELWATESGRSDALWRQLADQGMAALMVPQEQGGLGLGEVEWAPLAQACGY
FALPEPLLDTALVAAALLRDALPLVQDDAARDRCTTLLERIAGGHARIAVAHPQELLVADAHVADAILCEHEGAVHLLRR
DEAVLTPRAGLDPSRRLFELAWTHSEQTQLIPAAAAATAGLWDDALNRGALGVAAQQLGLTQRMLDLAIDYSAQRKQFGK
AIGTNQAVKHLLADVAIQLEFAKPVLHRAASALAQGLSQAGLHVSHARVAAARCAWSAARQAIQVHGAMGYTWELDLQIF
TKRAWALAGSWGDRAFHKARLGAHILDGAHDIGAGATFA

Sequences:

>Translated_359_residues
MDFTFTEEQEQFAEAIRRFLMTEMTPELTRELWATESGRSDALWRQLADQGMAALMVPQEQGGLGLGEVEWAPLAQACGY
FALPEPLLDTALVAAALLRDALPLVQDDAARDRCTTLLERIAGGHARIAVAHPQELLVADAHVADAILCEHEGAVHLLRR
DEAVLTPRAGLDPSRRLFELAWTHSEQTQLIPAAAAATAGLWDDALNRGALGVAAQQLGLTQRMLDLAIDYSAQRKQFGK
AIGTNQAVKHLLADVAIQLEFAKPVLHRAASALAQGLSQAGLHVSHARVAAARCAWSAARQAIQVHGAMGYTWELDLQIF
TKRAWALAGSWGDRAFHKARLGAHILDGAHDIGAGATFA
>Mature_359_residues
MDFTFTEEQEQFAEAIRRFLMTEMTPELTRELWATESGRSDALWRQLADQGMAALMVPQEQGGLGLGEVEWAPLAQACGY
FALPEPLLDTALVAAALLRDALPLVQDDAARDRCTTLLERIAGGHARIAVAHPQELLVADAHVADAILCEHEGAVHLLRR
DEAVLTPRAGLDPSRRLFELAWTHSEQTQLIPAAAAATAGLWDDALNRGALGVAAQQLGLTQRMLDLAIDYSAQRKQFGK
AIGTNQAVKHLLADVAIQLEFAKPVLHRAASALAQGLSQAGLHVSHARVAAARCAWSAARQAIQVHGAMGYTWELDLQIF
TKRAWALAGSWGDRAFHKARLGAHILDGAHDIGAGATFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=151, Percent_Identity=32.4503311258278, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI4557233, Length=110, Percent_Identity=36.3636363636364, Blast_Score=65, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17569725, Length=107, Percent_Identity=36.4485981308411, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24646207, Length=123, Percent_Identity=36.5853658536585, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 38753; Mature: 38753

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFTFTEEQEQFAEAIRRFLMTEMTPELTRELWATESGRSDALWRQLADQGMAALMVPQE
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECC
QGGLGLGEVEWAPLAQACGYFALPEPLLDTALVAAALLRDALPLVQDDAARDRCTTLLER
CCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IAGGHARIAVAHPQELLVADAHVADAILCEHEGAVHLLRRDEAVLTPRAGLDPSRRLFEL
HCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEHCCCCEEECCCCCCCHHHHHHHH
AWTHSEQTQLIPAAAAATAGLWDDALNRGALGVAAQQLGLTQRMLDLAIDYSAQRKQFGK
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AIGTNQAVKHLLADVAIQLEFAKPVLHRAASALAQGLSQAGLHVSHARVAAARCAWSAAR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QAIQVHGAMGYTWELDLQIFTKRAWALAGSWGDRAFHKARLGAHILDGAHDIGAGATFA
HHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCC
>Mature Secondary Structure
MDFTFTEEQEQFAEAIRRFLMTEMTPELTRELWATESGRSDALWRQLADQGMAALMVPQE
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECC
QGGLGLGEVEWAPLAQACGYFALPEPLLDTALVAAALLRDALPLVQDDAARDRCTTLLER
CCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IAGGHARIAVAHPQELLVADAHVADAILCEHEGAVHLLRRDEAVLTPRAGLDPSRRLFEL
HCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEHCCCCEEECCCCCCCHHHHHHHH
AWTHSEQTQLIPAAAAATAGLWDDALNRGALGVAAQQLGLTQRMLDLAIDYSAQRKQFGK
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AIGTNQAVKHLLADVAIQLEFAKPVLHRAASALAQGLSQAGLHVSHARVAAARCAWSAAR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QAIQVHGAMGYTWELDLQIFTKRAWALAGSWGDRAFHKARLGAHILDGAHDIGAGATFA
HHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]