| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is lip2 [H]
Identifier: 73541227
GI number: 73541227
Start: 1656105
End: 1657061
Strand: Reverse
Name: lip2 [H]
Synonym: Reut_A1537
Alternate gene names: 73541227
Gene position: 1657061-1656105 (Counterclockwise)
Preceding gene: 73541228
Following gene: 73541226
Centisome position: 43.53
GC content: 71.58
Gene sequence:
>957_bases ATGCCGCTCGATCCCCAGGCCCGCGCCATGCTGGACGCCATGGCCGCCATGCCGAGTCCCGACTTCACCACGCTGCGCGC TGCCGACTACCGTGCGGCAGTCGCCGCCATGCCGGCCTTTGCGCCCGGCGACAGCGTTGCCGCGCAGCAAGACCTGACCA TCGATGGCGCCGCGGGCCCGTTGCCGGCGCGCCTGTACCGGCCCGACGACAGCGCAGGTCCGCCGCTCATCGTTTATTTC CATGGCGGCGGCTTCGTGCTCTGCGGCCTCGATTCGCACGACAACATCTGCCGCAGCCTGGCGCGTCGCAGCGGCGCGCT GGTGCTGTCGGTCGACTACCGGCTGGCTCCGGAAGCGCGCTTCCCGGCCGCGGCCGACGACGCGGTTGCGGCTGTGCGCT GGGCCGCCGGGCACGCCGCCGAGCTTGGCGTCGACCCGGCCCGGCTGGCAGTGGCCGGCGACAGCGCCGGCGGCAACCTC GCCGCAGTCGTGTGCCAGCAACTGCGCGGCAGCGGCATCGCGCTGAAGCACCAGTTGCTGCTCTACCCTTACCTGGACTG CACTGACGCCGCCGCCGACAGCGCCAGTTACCGCGCCTGTGCCGAAGGCTATTTCCTCAGTGCGCGCGAACTCGACTGGT GTCGCGCCCAGTACCTGGCCAATCCGGACGCCGCCGCCGATGTCCGCGCGAGCCCCTTGCACCAGCGAGATCTGCAGGGC CTGCCGGCCGCCACCATCATCACGGCGGAATTCGATCCGCTGCGCGACCAGGGCGAAGCGTATGGCGAAGCGTTGCGGGG CGCGGGCGGTGCGGCCACCGTACGCCGCTGGCCGGGCCAGTTCCATGGCTTCATGAGCATGCAGGGCGTGCTCGATGCCG CGAGCCATGCGCTCGATGCCGCCGCTGCGTCATTGCGCCAGGCTTTCGCCGCCAGCGGCACGCAGGAGGCAGCATGA
Upstream 100 bases:
>100_bases CCGCCCAAGCCGCGCTCGTACGCGCGCAAGGCATTGCCGCCGGCAAGGCGCCCGCCTTCGCGCTCTGACCATCATCACCC CAAGTTACTCAGGAGACCCG
Downstream 100 bases:
>100_bases ACGCCGCCATGCTCCCGCCGATGCTGGACGTGCTCGCGGCGCTGGCTGCGGGACAGCGTGTGGTGGTGCTCGAAGACGAG ACCGACGAAGCCCTTGGCTG
Product: lipolytic protein
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MPLDPQARAMLDAMAAMPSPDFTTLRAADYRAAVAAMPAFAPGDSVAAQQDLTIDGAAGPLPARLYRPDDSAGPPLIVYF HGGGFVLCGLDSHDNICRSLARRSGALVLSVDYRLAPEARFPAAADDAVAAVRWAAGHAAELGVDPARLAVAGDSAGGNL AAVVCQQLRGSGIALKHQLLLYPYLDCTDAAADSASYRACAEGYFLSARELDWCRAQYLANPDAAADVRASPLHQRDLQG LPAATIITAEFDPLRDQGEAYGEALRGAGGAATVRRWPGQFHGFMSMQGVLDAASHALDAAAASLRQAFAASGTQEAA
Sequences:
>Translated_318_residues MPLDPQARAMLDAMAAMPSPDFTTLRAADYRAAVAAMPAFAPGDSVAAQQDLTIDGAAGPLPARLYRPDDSAGPPLIVYF HGGGFVLCGLDSHDNICRSLARRSGALVLSVDYRLAPEARFPAAADDAVAAVRWAAGHAAELGVDPARLAVAGDSAGGNL AAVVCQQLRGSGIALKHQLLLYPYLDCTDAAADSASYRACAEGYFLSARELDWCRAQYLANPDAAADVRASPLHQRDLQG LPAATIITAEFDPLRDQGEAYGEALRGAGGAATVRRWPGQFHGFMSMQGVLDAASHALDAAAASLRQAFAASGTQEAA >Mature_317_residues PLDPQARAMLDAMAAMPSPDFTTLRAADYRAAVAAMPAFAPGDSVAAQQDLTIDGAAGPLPARLYRPDDSAGPPLIVYFH GGGFVLCGLDSHDNICRSLARRSGALVLSVDYRLAPEARFPAAADDAVAAVRWAAGHAAELGVDPARLAVAGDSAGGNLA AVVCQQLRGSGIALKHQLLLYPYLDCTDAAADSASYRACAEGYFLSARELDWCRAQYLANPDAAADVRASPLHQRDLQGL PAATIITAEFDPLRDQGEAYGEALRGAGGAATVRRWPGQFHGFMSMQGVLDAASHALDAAAASLRQAFAASGTQEAA
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI68299767, Length=285, Percent_Identity=32.280701754386, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI206597554, Length=329, Percent_Identity=29.1793313069909, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI68051721, Length=275, Percent_Identity=28.3636363636364, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI157041239, Length=183, Percent_Identity=35.5191256830601, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI226423947, Length=283, Percent_Identity=27.5618374558304, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI21328446, Length=89, Percent_Identity=50.561797752809, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI61966717, Length=170, Percent_Identity=31.1764705882353, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI157041237, Length=112, Percent_Identity=38.3928571428571, Blast_Score=76, Evalue=5e-14, Organism=Escherichia coli, GI1786682, Length=246, Percent_Identity=32.9268292682927, Blast_Score=108, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17567059, Length=272, Percent_Identity=31.6176470588235, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17540028, Length=170, Percent_Identity=34.1176470588235, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71996133, Length=143, Percent_Identity=34.2657342657343, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI72001146, Length=124, Percent_Identity=35.4838709677419, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI115533412, Length=125, Percent_Identity=32, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115533410, Length=125, Percent_Identity=32, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24656084, Length=109, Percent_Identity=37.6146788990826, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24656076, Length=109, Percent_Identity=37.6146788990826, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI20130169, Length=109, Percent_Identity=37.6146788990826, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 33035; Mature: 32904
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS01174 LIPASE_GDXG_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDPQARAMLDAMAAMPSPDFTTLRAADYRAAVAAMPAFAPGDSVAAQQDLTIDGAAGP CCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCC LPARLYRPDDSAGPPLIVYFHGGGFVLCGLDSHDNICRSLARRSGALVLSVDYRLAPEAR CCCEEECCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHCCCCEEEEECCEECCCCC FPAAADDAVAAVRWAAGHAAELGVDPARLAVAGDSAGGNLAAVVCQQLRGSGIALKHQLL CCCCCCHHHHHHHHHCCCHHHCCCCHHHEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEE LYPYLDCTDAAADSASYRACAEGYFLSARELDWCRAQYLANPDAAADVRASPLHQRDLQG EEECCCCCHHHCCCCHHHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCC LPAATIITAEFDPLRDQGEAYGEALRGAGGAATVRRWPGQFHGFMSMQGVLDAASHALDA CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH AAASLRQAFAASGTQEAA HHHHHHHHHHHCCCCCCC >Mature Secondary Structure PLDPQARAMLDAMAAMPSPDFTTLRAADYRAAVAAMPAFAPGDSVAAQQDLTIDGAAGP CCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCC LPARLYRPDDSAGPPLIVYFHGGGFVLCGLDSHDNICRSLARRSGALVLSVDYRLAPEAR CCCEEECCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHCCCCEEEEECCEECCCCC FPAAADDAVAAVRWAAGHAAELGVDPARLAVAGDSAGGNLAAVVCQQLRGSGIALKHQLL CCCCCCHHHHHHHHHCCCHHHCCCCHHHEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEE LYPYLDCTDAAADSASYRACAEGYFLSARELDWCRAQYLANPDAAADVRASPLHQRDLQG EEECCCCCHHHCCCCHHHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCC LPAATIITAEFDPLRDQGEAYGEALRGAGGAATVRRWPGQFHGFMSMQGVLDAASHALDA CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH AAASLRQAFAASGTQEAA HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]