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The map label for this gene is yngJ [H]

Identifier: 73541102

GI number: 73541102

Start: 1524306

End: 1526162

Strand: Direct

Name: yngJ [H]

Synonym: Reut_A1408

Alternate gene names: 73541102

Gene position: 1524306-1526162 (Clockwise)

Preceding gene: 73541101

Following gene: 73541103

Centisome position: 40.04

GC content: 64.24

Gene sequence:

>1857_bases
ATGTCGCTGATCCTTTCCCGCCGTGACCTGAATTTCGTCCTGTACGAATGGCTCAAGGCGGACGAACTGACCCGTATTCC
CCGCTACGCCGACCACTCGCGCGAGACTTTCGACGCGGCGCTGGATACGTGCGAGAAAATCGCCACCGACCTGTTTGCGC
CCCACAACAAGAAGAACGACCAGCACGAACCCGAATTCGACGGCGAGACCGTCACCATCATTCCAGAAGTTGGCACGGCG
CTGAAGGCGTTCTGCGAGGCCGGGCTGATGGCCGCCGGACAGGACTACGAAATCGGCGGCATGCAGCTGCCGGTGCTGGT
CGAGAAAGCAGGCTTTGCGTACTTCAAGGGCGCCAACGTCGGCACGAGTTCCTACCCGTTCCTGACCATCGGCAACGCCA
ACCTGCTGCTTACGCACGGCACGCCCGCGCAGATCGATACCTTCGTCAAGCCCGAAATGGAAGGCCGCTTCTTCGGCACC
ATGTGCCTGTCGGAGCCGCAGGCCGGTTCGTCGCTGTCGGACGTCACCACGCGTGCCGAGTACGAAGGCGAATCGCCGCT
CGGCGCGCAATACCGTCTGCGCGGCAACAAGATGTGGATCTCGGCCGGCGAGCACGAGCTGTCGGACAACATCGTGCATC
TGGTGCTGGCCAAGATTCCGGGGCCGGACGGAAAGCTGGTGCCGGGCGTGAAGGGCATCTCGCTGTTCATCGTGCCAAAG
TACCTCGTCAACGCGGACGGCTCGCTCGGCGAGCACAACGACGTGGTGCTGGCCGGCCTGAACCACAAGATGGGTTACCG
TGGCACCACGAACTGCCTGCTGAATTTCGGCGAGGGCATGAAGTACAAGCCGGCCGGCAAGGCTGGCGCCATCGGCTATC
TGGTCGGCGAGCCCGGCAAGGGCCTTGCCTGCATGTTCCACATGATGAACGAGGCCCGCATCGGCGTGGGCCTCGGCGCG
GTCATGCTCGGCTATACCGGCTATCTGCATGCAGTCGACTATGCGCGCAATCGTCCGCAAGGCCGCCCGGTCGGCCCCGG
CGGCAAGGACCCGGCAAGCCCGCAGGTGAAGCTCGTCGAGCATGCCGATATTCGCCGCATGCTGCTCGCACAGAAGAGCT
ATGTGGAAGGCGGCCTCGCGCTGAACCTGTATTGCGCGAAGCTGGTCGACGAAGAGCGCGCCGCGTCCGCCGATGCGGTC
AAGCATGAACAGCTTTCGCTGCTGCTCGATATCCTGACCCCGATCGCCAAGAGCTGGCCGTCGCAGTGGTGCCTCGAAGC
CAACAACCTGGCTATCCAGGTCCATGGTGGCTATGGCTATACCCGCGAGTACAACGTCGAGCAGTTCTACCGCGACAACC
GCCTGAACCCGATCCATGAAGGCACGCACGGCATCCAGGGCCTGGACCTGCTGGGCCGCAAGGTCGTGATGAAGGACGGC
GCCGCATTCCGCCTGCTGGGCGAGCGTGTGCGCGAGACCTGCGAATGCGCACTGTCGAGCGGCGACAAGGAGCTGGGCAG
CCAGGCGCGCGCGCTTGGTGCTGCGGCGACACGTCTTGCCGAGGTCACGAAGGTGCTGTGGAGCGCCGGCGATGCCAACG
TGACGCTGGCCAATGCGAGCATCTACCTGGAAGCGTTCGGCCACGTGGTGGTCGCATGGATCTGGCTGGAGCAGGCACTG
GTCGCGCAAGCTGCGCTGGCAGGTGGCGCCAGCGGCGAGGACGAAACCTTCTATCGCGGCAAGCTTGCCGCGGCCACGTA
CTTCTCCCGCTGGGAACTGCCCAAGGTCGGCCCGCAGCTCGAACTGCTGGCTACGCTGGACCGCACCACGCTGGATATGC
AGGACGCCTGGTTCTGA

Upstream 100 bases:

>100_bases
AGGGTCATTCCCATTCGATAGGGATTTCTCGCACCCTCGGGCGCGCCAGCAAGACAAGAAGAACCGCGGTGCGCCACGCA
GCGCCCCGCATGGAGACACC

Downstream 100 bases:

>100_bases
CCCGCGCCGCTATCCGTGTCCACGACATCGAGGAACATCAGGGAACCCAATCATGCGTACCATCCAGCAACTATTTGACC
TGAAGGGCCGTACCGCGCTC

Product: Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region

Products: 2-butenoyl-CoA; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 618; Mature: 617

Protein sequence:

>618_residues
MSLILSRRDLNFVLYEWLKADELTRIPRYADHSRETFDAALDTCEKIATDLFAPHNKKNDQHEPEFDGETVTIIPEVGTA
LKAFCEAGLMAAGQDYEIGGMQLPVLVEKAGFAYFKGANVGTSSYPFLTIGNANLLLTHGTPAQIDTFVKPEMEGRFFGT
MCLSEPQAGSSLSDVTTRAEYEGESPLGAQYRLRGNKMWISAGEHELSDNIVHLVLAKIPGPDGKLVPGVKGISLFIVPK
YLVNADGSLGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGMKYKPAGKAGAIGYLVGEPGKGLACMFHMMNEARIGVGLGA
VMLGYTGYLHAVDYARNRPQGRPVGPGGKDPASPQVKLVEHADIRRMLLAQKSYVEGGLALNLYCAKLVDEERAASADAV
KHEQLSLLLDILTPIAKSWPSQWCLEANNLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLLGRKVVMKDG
AAFRLLGERVRETCECALSSGDKELGSQARALGAAATRLAEVTKVLWSAGDANVTLANASIYLEAFGHVVVAWIWLEQAL
VAQAALAGGASGEDETFYRGKLAAATYFSRWELPKVGPQLELLATLDRTTLDMQDAWF

Sequences:

>Translated_618_residues
MSLILSRRDLNFVLYEWLKADELTRIPRYADHSRETFDAALDTCEKIATDLFAPHNKKNDQHEPEFDGETVTIIPEVGTA
LKAFCEAGLMAAGQDYEIGGMQLPVLVEKAGFAYFKGANVGTSSYPFLTIGNANLLLTHGTPAQIDTFVKPEMEGRFFGT
MCLSEPQAGSSLSDVTTRAEYEGESPLGAQYRLRGNKMWISAGEHELSDNIVHLVLAKIPGPDGKLVPGVKGISLFIVPK
YLVNADGSLGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGMKYKPAGKAGAIGYLVGEPGKGLACMFHMMNEARIGVGLGA
VMLGYTGYLHAVDYARNRPQGRPVGPGGKDPASPQVKLVEHADIRRMLLAQKSYVEGGLALNLYCAKLVDEERAASADAV
KHEQLSLLLDILTPIAKSWPSQWCLEANNLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLLGRKVVMKDG
AAFRLLGERVRETCECALSSGDKELGSQARALGAAATRLAEVTKVLWSAGDANVTLANASIYLEAFGHVVVAWIWLEQAL
VAQAALAGGASGEDETFYRGKLAAATYFSRWELPKVGPQLELLATLDRTTLDMQDAWF
>Mature_617_residues
SLILSRRDLNFVLYEWLKADELTRIPRYADHSRETFDAALDTCEKIATDLFAPHNKKNDQHEPEFDGETVTIIPEVGTAL
KAFCEAGLMAAGQDYEIGGMQLPVLVEKAGFAYFKGANVGTSSYPFLTIGNANLLLTHGTPAQIDTFVKPEMEGRFFGTM
CLSEPQAGSSLSDVTTRAEYEGESPLGAQYRLRGNKMWISAGEHELSDNIVHLVLAKIPGPDGKLVPGVKGISLFIVPKY
LVNADGSLGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGMKYKPAGKAGAIGYLVGEPGKGLACMFHMMNEARIGVGLGAV
MLGYTGYLHAVDYARNRPQGRPVGPGGKDPASPQVKLVEHADIRRMLLAQKSYVEGGLALNLYCAKLVDEERAASADAVK
HEQLSLLLDILTPIAKSWPSQWCLEANNLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLLGRKVVMKDGA
AFRLLGERVRETCECALSSGDKELGSQARALGAAATRLAEVTKVLWSAGDANVTLANASIYLEAFGHVVVAWIWLEQALV
AQAALAGGASGEDETFYRGKLAAATYFSRWELPKVGPQLELLATLDRTTLDMQDAWF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=391, Percent_Identity=26.5984654731458, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI7656849, Length=361, Percent_Identity=26.0387811634349, Blast_Score=88, Evalue=3e-17,
Organism=Homo sapiens, GI4557235, Length=354, Percent_Identity=27.1186440677966, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI76496475, Length=353, Percent_Identity=27.4787535410765, Blast_Score=84, Evalue=5e-16,
Organism=Homo sapiens, GI226958412, Length=341, Percent_Identity=26.9794721407625, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI226958414, Length=341, Percent_Identity=26.9794721407625, Blast_Score=77, Evalue=6e-14,
Organism=Escherichia coli, GI87082384, Length=380, Percent_Identity=26.5789473684211, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17533517, Length=402, Percent_Identity=26.3681592039801, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71985184, Length=338, Percent_Identity=27.5147928994083, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24646207, Length=436, Percent_Identity=25.9174311926606, Blast_Score=89, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.2

Molecular weight: Translated: 67171; Mature: 67040

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLILSRRDLNFVLYEWLKADELTRIPRYADHSRETFDAALDTCEKIATDLFAPHNKKND
CCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
QHEPEFDGETVTIIPEVGTALKAFCEAGLMAAGQDYEIGGMQLPVLVEKAGFAYFKGANV
CCCCCCCCCEEEEECCCCHHHHHHHHHCHHCCCCCCCCCCEEECEEEECCCCEEEECCCC
GTSSYPFLTIGNANLLLTHGTPAQIDTFVKPEMEGRFFGTMCLSEPQAGSSLSDVTTRAE
CCCCCCEEEECCCEEEEECCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHC
YEGESPLGAQYRLRGNKMWISAGEHELSDNIVHLVLAKIPGPDGKLVPGVKGISLFIVPK
CCCCCCCCCEEEEECCEEEEECCCHHHHCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEH
YLVNADGSLGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGMKYKPAGKAGAIGYLVGEPGK
HHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHEECCCCCEECCCCCCCCEEEEECCCCC
GLACMFHMMNEARIGVGLGAVMLGYTGYLHAVDYARNRPQGRPVGPGGKDPASPQVKLVE
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEH
HADIRRMLLAQKSYVEGGLALNLYCAKLVDEERAASADAVKHEQLSLLLDILTPIAKSWP
HHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
SQWCLEANNLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLLGRKVVMKDG
HHHCEECCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHCCEEEECCC
AAFRLLGERVRETCECALSSGDKELGSQARALGAAATRLAEVTKVLWSAGDANVTLANAS
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECE
IYLEAFGHVVVAWIWLEQALVAQAALAGGASGEDETFYRGKLAAATYFSRWELPKVGPQL
EEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCC
ELLATLDRTTLDMQDAWF
CEEEHHCCCEECCHHCCC
>Mature Secondary Structure 
SLILSRRDLNFVLYEWLKADELTRIPRYADHSRETFDAALDTCEKIATDLFAPHNKKND
CEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
QHEPEFDGETVTIIPEVGTALKAFCEAGLMAAGQDYEIGGMQLPVLVEKAGFAYFKGANV
CCCCCCCCCEEEEECCCCHHHHHHHHHCHHCCCCCCCCCCEEECEEEECCCCEEEECCCC
GTSSYPFLTIGNANLLLTHGTPAQIDTFVKPEMEGRFFGTMCLSEPQAGSSLSDVTTRAE
CCCCCCEEEECCCEEEEECCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHC
YEGESPLGAQYRLRGNKMWISAGEHELSDNIVHLVLAKIPGPDGKLVPGVKGISLFIVPK
CCCCCCCCCEEEEECCEEEEECCCHHHHCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEH
YLVNADGSLGEHNDVVLAGLNHKMGYRGTTNCLLNFGEGMKYKPAGKAGAIGYLVGEPGK
HHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHEECCCCCEECCCCCCCCEEEEECCCCC
GLACMFHMMNEARIGVGLGAVMLGYTGYLHAVDYARNRPQGRPVGPGGKDPASPQVKLVE
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEH
HADIRRMLLAQKSYVEGGLALNLYCAKLVDEERAASADAVKHEQLSLLLDILTPIAKSWP
HHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
SQWCLEANNLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLLGRKVVMKDG
HHHCEECCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHCCEEEECCC
AAFRLLGERVRETCECALSSGDKELGSQARALGAAATRLAEVTKVLWSAGDANVTLANAS
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECE
IYLEAFGHVVVAWIWLEQALVAQAALAGGASGEDETFYRGKLAAATYFSRWELPKVGPQL
EEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCC
ELLATLDRTTLDMQDAWF
CEEEHHCCCEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: butanoyl-CoA; acceptor

Specific reaction: butanoyl-CoA + acceptor = 2-butenoyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]