| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is livH [H]
Identifier: 73541094
GI number: 73541094
Start: 1514237
End: 1515265
Strand: Direct
Name: livH [H]
Synonym: Reut_A1400
Alternate gene names: 73541094
Gene position: 1514237-1515265 (Clockwise)
Preceding gene: 73541093
Following gene: 73541095
Centisome position: 39.78
GC content: 62.78
Gene sequence:
>1029_bases ATGCCATGCCCGGCAGGATGCGCTCACCCTTGTTCAAACCGGATGGCCGCGCTGTGGCGCAGCCAGATTGAAGGATACGT TGTGGAATTCTTCGTCATTTCTTTGCTGAACGGCATCAGCTACGGGCTGCTGCTGTTCATGCTCTCGTCTGGCCTCACGC TGATCTTCAGCATGATGGGTGTGCTCAACTTCGCGCACGCGAGCTTCTACATGCTCGGGGCCTACTTTGCCTACACCGTT GCCAGCAAGATAGGATTCTGGCCGGCGCTGATCCTGGCGCCGCTGCTGGTGGCATTTGCCGGCGCGCTCGTGGAACGCTT CGGCCTGCGCGCCGTGCACAAGTACGGGCATGTGGCCGAGCTGCTGTTCACGTTCGGCCTGGCCTACCTGATCGAAGAAG GGGTCAAGCTCGTCTGGGGCCTGGCTGCCGTGCCATACCGTATTCCGGCCGAACTCGACGGGCCGCTGTTCACGGTATTC ACGTCGTCGTTCCCGAAATACCGTGCATTCATGATGCTGGTCTCGCTGGGCATGCTCGTGGCGATCTATCTCGTGCTCAC GCGCACGCGCATCGGCCTCGTGATCCAGGCGGCGCTGACGCATCCGGAGATGGTGGAAGCGCTTGGCCACAATGTGCCGC GCGTGTTCATGATGGTGTTCGGCGGGGGCGCGGCGCTGGCCGGACTTGCCGGCGTGATCGGTGGCAATGCCTTTGTCACC GAGCCATCGATGGCGGCGGCAGTCGGGTCGATCGTATTCGTGGTCGCGGTGGTGGGCGGCATGGGTTCACTGGTGGGGGC GTTTATCGCTTCTATCCTGATCGGCGTGCTGCAGACGTTCGCCGTGACCATCGATGCGTCGCTGGCCGGCCTCTTCAACA GCATTGGCCTGGCCGTCAGCGACGCCACGCCGTTCTACTCGCTGTGGAAGCTGACCGTGGCCCAGGTGGCGCCGGTGCTA CCTTATCTGCTGCTGGTGCTGATGCTGATCTTCCGGCCGCGAGGTCTGATGGGAACCCGGGAGAGCTGA
Upstream 100 bases:
>100_bases GCCGGGCTGATCCTGCCCACGGCGGGCCGGCCGGCAGCATAAAGCCGGCCGCCCGATCCTGCATACTTTCGGTAGAAGAC CGGGGAGCGTCCGGGCATGC
Downstream 100 bases:
>100_bases GCCATGAGAATCGAATCGACAATGGAACAACGCCGCGGGCCGGTCGTGACCGGCCGTACCATGCGCTACAAGCCGCTCAA CCTTGCGCGCTGGGTGATCT
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein H [H]
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MPCPAGCAHPCSNRMAALWRSQIEGYVVEFFVISLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYTV ASKIGFWPALILAPLLVAFAGALVERFGLRAVHKYGHVAELLFTFGLAYLIEEGVKLVWGLAAVPYRIPAELDGPLFTVF TSSFPKYRAFMMLVSLGMLVAIYLVLTRTRIGLVIQAALTHPEMVEALGHNVPRVFMMVFGGGAALAGLAGVIGGNAFVT EPSMAAAVGSIVFVVAVVGGMGSLVGAFIASILIGVLQTFAVTIDASLAGLFNSIGLAVSDATPFYSLWKLTVAQVAPVL PYLLLVLMLIFRPRGLMGTRES
Sequences:
>Translated_342_residues MPCPAGCAHPCSNRMAALWRSQIEGYVVEFFVISLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYTV ASKIGFWPALILAPLLVAFAGALVERFGLRAVHKYGHVAELLFTFGLAYLIEEGVKLVWGLAAVPYRIPAELDGPLFTVF TSSFPKYRAFMMLVSLGMLVAIYLVLTRTRIGLVIQAALTHPEMVEALGHNVPRVFMMVFGGGAALAGLAGVIGGNAFVT EPSMAAAVGSIVFVVAVVGGMGSLVGAFIASILIGVLQTFAVTIDASLAGLFNSIGLAVSDATPFYSLWKLTVAQVAPVL PYLLLVLMLIFRPRGLMGTRES >Mature_341_residues PCPAGCAHPCSNRMAALWRSQIEGYVVEFFVISLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYTVA SKIGFWPALILAPLLVAFAGALVERFGLRAVHKYGHVAELLFTFGLAYLIEEGVKLVWGLAAVPYRIPAELDGPLFTVFT SSFPKYRAFMMLVSLGMLVAIYLVLTRTRIGLVIQAALTHPEMVEALGHNVPRVFMMVFGGGAALAGLAGVIGGNAFVTE PSMAAAVGSIVFVVAVVGGMGSLVGAFIASILIGVLQTFAVTIDASLAGLFNSIGLAVSDATPFYSLWKLTVAQVAPVLP YLLLVLMLIFRPRGLMGTRES
Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=328, Percent_Identity=25.3048780487805, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 36437; Mature: 36306
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCPAGCAHPCSNRMAALWRSQIEGYVVEFFVISLLNGISYGLLLFMLSSGLTLIFSMMG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VLNFAHASFYMLGAYFAYTVASKIGFWPALILAPLLVAFAGALVERFGLRAVHKYGHVAE HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFTFGLAYLIEEGVKLVWGLAAVPYRIPAELDGPLFTVFTSSFPKYRAFMMLVSLGMLV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHH AIYLVLTRTRIGLVIQAALTHPEMVEALGHNVPRVFMMVFGGGAALAGLAGVIGGNAFVT HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEE EPSMAAAVGSIVFVVAVVGGMGSLVGAFIASILIGVLQTFAVTIDASLAGLFNSIGLAVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DATPFYSLWKLTVAQVAPVLPYLLLVLMLIFRPRGLMGTRES CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PCPAGCAHPCSNRMAALWRSQIEGYVVEFFVISLLNGISYGLLLFMLSSGLTLIFSMMG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VLNFAHASFYMLGAYFAYTVASKIGFWPALILAPLLVAFAGALVERFGLRAVHKYGHVAE HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFTFGLAYLIEEGVKLVWGLAAVPYRIPAELDGPLFTVFTSSFPKYRAFMMLVSLGMLV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHH AIYLVLTRTRIGLVIQAALTHPEMVEALGHNVPRVFMMVFGGGAALAGLAGVIGGNAFVT HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEE EPSMAAAVGSIVFVVAVVGGMGSLVGAFIASILIGVLQTFAVTIDASLAGLFNSIGLAVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DATPFYSLWKLTVAQVAPVLPYLLLVLMLIFRPRGLMGTRES CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]