| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73540999
Identifier: 73540999
GI number: 73540999
Start: 1399674
End: 1400291
Strand: Direct
Name: 73540999
Synonym: Reut_A1305
Alternate gene names: NA
Gene position: 1399674-1400291 (Clockwise)
Preceding gene: 73540998
Following gene: 73541000
Centisome position: 36.77
GC content: 63.92
Gene sequence:
>618_bases ATGACTACCTGTGTCGTCGTCAGAAAGGGTGCAGAGGTCGCGATCGCGGCCGATGCACTGGTCACGTTCGGGGATACGCG CCTGTCGCGCGCCTACGAGCGCAACCAGAAGGTGTTTCCGATCGGCGACAGCTTTGTCGCGCTGGCCGGCACCACGGCGC ACTTCCCGGTCATGCGCGCCTTGCTGGCGGGCATGGGAGAGGAATGCCGGCTCGGGTCGCGCGATGACGTGTTCCGGACC TTCCTGAAGGTGCATGAGAAGCTGAAGTCCGAGTACTTCATCAACACCAAGGAAGATGAGGACGATCCGTACGAGTCGTC GCAGATCGTCTGCCTGATCGCGAACCCGGCGGGGATCTTCGGCGTGTATTCGTACCGTGAGGTGTTCTCGTTCGACCGTT TCTGGGGCATCGGCTCGGGCCGCAACTATGCGCTGGGGGCCATGCACGCGGTCTACGACAAGCCCGACCTGGATGCCGCC GCTGTTGCGCGCATCGGTGTCGACGCCGGCATCGAGTTCGACAAGAGTTCCGCAGGCCCGATTGAAGTCCATACCGTAAG GCTGCACGAAGCCGGCGCCGCCGGCGCAGCGGCAACCAACAACGACGGCGCGCCCTGA
Upstream 100 bases:
>100_bases GGCAACTGCTGGCGGACTTCCGTCGCATCCTTCTCTAAGGGGCCGCGGCCATGTCCGGAACGGGCATGGCCATGGTGCTT GCAGTCGAGCGAGGCAAGCC
Downstream 100 bases:
>100_bases AGCCACGCAGGCCGGCGCGCATTGAGGAGCAAATATGAGTGTGATCGAAGTCAAGGTGCCGGATATCGGCGATTTCGACG CGGTGGAACTGATCGAGGTC
Product: 20S proteasome, A and B subunits
Products: NA
Alternate protein names: ATP-Dependent Protease HslVU Peptidase Subunit; Hydrolase Proteasome Hslv Type Peptidase Domain; ATP-Dependent Protease Peptidase Subunit
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTTCVVVRKGAEVAIAADALVTFGDTRLSRAYERNQKVFPIGDSFVALAGTTAHFPVMRALLAGMGEECRLGSRDDVFRT FLKVHEKLKSEYFINTKEDEDDPYESSQIVCLIANPAGIFGVYSYREVFSFDRFWGIGSGRNYALGAMHAVYDKPDLDAA AVARIGVDAGIEFDKSSAGPIEVHTVRLHEAGAAGAAATNNDGAP
Sequences:
>Translated_205_residues MTTCVVVRKGAEVAIAADALVTFGDTRLSRAYERNQKVFPIGDSFVALAGTTAHFPVMRALLAGMGEECRLGSRDDVFRT FLKVHEKLKSEYFINTKEDEDDPYESSQIVCLIANPAGIFGVYSYREVFSFDRFWGIGSGRNYALGAMHAVYDKPDLDAA AVARIGVDAGIEFDKSSAGPIEVHTVRLHEAGAAGAAATNNDGAP >Mature_204_residues TTCVVVRKGAEVAIAADALVTFGDTRLSRAYERNQKVFPIGDSFVALAGTTAHFPVMRALLAGMGEECRLGSRDDVFRTF LKVHEKLKSEYFINTKEDEDDPYESSQIVCLIANPAGIFGVYSYREVFSFDRFWGIGSGRNYALGAMHAVYDKPDLDAAA VARIGVDAGIEFDKSSAGPIEVHTVRLHEAGAAGAAATNNDGAP
Specific function: Unknown
COG id: COG5405
COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22102; Mature: 21971
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTCVVVRKGAEVAIAADALVTFGDTRLSRAYERNQKVFPIGDSFVALAGTTAHFPVMRA CCEEEEEECCCCEEEEECCEEECCCHHHHHHHHHCCEEEECCCCEEEEECCCHHHHHHHH LLAGMGEECRLGSRDDVFRTFLKVHEKLKSEYFINTKEDEDDPYESSQIVCLIANPAGIF HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEECCCCHH GVYSYREVFSFDRFWGIGSGRNYALGAMHAVYDKPDLDAAAVARIGVDAGIEFDKSSAGP HHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCCCCCHHHHHHHCCCCCCEECCCCCCC IEVHTVRLHEAGAAGAAATNNDGAP EEEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TTCVVVRKGAEVAIAADALVTFGDTRLSRAYERNQKVFPIGDSFVALAGTTAHFPVMRA CEEEEEECCCCEEEEECCEEECCCHHHHHHHHHCCEEEECCCCEEEEECCCHHHHHHHH LLAGMGEECRLGSRDDVFRTFLKVHEKLKSEYFINTKEDEDDPYESSQIVCLIANPAGIF HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEECCCCHH GVYSYREVFSFDRFWGIGSGRNYALGAMHAVYDKPDLDAAAVARIGVDAGIEFDKSSAGP HHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCCCCCHHHHHHHCCCCCCEECCCCCCC IEVHTVRLHEAGAAGAAATNNDGAP EEEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA