| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is hemX [H]
Identifier: 73540407
GI number: 73540407
Start: 760155
End: 762224
Strand: Direct
Name: hemX [H]
Synonym: Reut_A0701
Alternate gene names: 73540407
Gene position: 760155-762224 (Clockwise)
Preceding gene: 73540406
Following gene: 73540408
Centisome position: 19.97
GC content: 67.97
Gene sequence:
>2070_bases ATGCCCCGCCCGACTGTCGTTGTCACACGACCCGCCGGGCAGTCCCGGCAACTGACAGAAGCGCTCCAGGCCGCAGGGCT CGATGTCCTCGGCTTTCCGCTGCTCTCGATTGGCCCCGCCGCCGATGACGCGCCGCTGCGCGCGGCACTGGCGCGCTTGG ACCAATTCGCGCTGGTGATTTTTGTCAGCCCCAACGCCATCCAGTACGCGGTCGATGCGCTCGCTGTGGTGCAGGGCATT GCCGCGGCGCAGTGGCCGCCCGGCGTCCCGGTGGCCGTGGTCGGACCCGCCAGCGTCATGGCGCTGGCCGAACGTGGCAT TGTCGCGCCCGACTATCGCGTGATCGCGCCGGCGGGTGCCGACGGCAACGGCACGAACGGCGGCGCCAACTGCGAAGAAG CCCGTTTTGACTCCGAAGCGCTCTGGGCTCAGCTCGAACCGGCCGCACTGCAAGGACGCTCCGTGCTCATCGTCCGCGGC AACGGTGGCCGCGACTGGCTTGGCGACCGATTGCGCGAAGCGGGCGCGGACGTCACGGCCGTCGAGGCGTACCAGCGCAC GCTGCCCGAGCCCACTGCCATGCAATGGCAGGCCGTGCGCGACGGCCTGAGCCCTGGCGCCGCCCCGCAAGCCTGGCTGC TGACCAGCTCCGAAGCCGTGCGCAACCTCGAGACACTGGCGCGACATAACCTGTCGCCGCAGGAACTGGCCACCCTGAAA CAGGTGCAGTGCATCGCGCCGCATGCGAGAATCGCCGAACAGGCGCAGGCGCTCGGCTTCACGCGCATCCTGCGTGCAGC GCCAGGCGATGCCGGCCTGCTCGCGGCATGCAAACAGTGGGCGGATGCCTATGCGGGCCCGATAGCCGCAAGTACACCGG TTCCTGCGGTGGCTCCGGCACCGCGGCCGGAGCCGCTGCCCGTGCCGCCGCCTGCCATGACAAACAGGGTCGAACGCGTG ACGCAAGAAACTACGTCCTCCTCAACCACCATTCCCCCCGGTGCCACGGCTTCGGCTTCGCCATCGGCCTCGTTCGCCGC GCCGCGCCGCAATGCCGCATTGTGGGCGCTGGTGGCGGTGCTGGTGCTGGCAACTGCCGGCGGCTTCTGGTGGCTGCAGC AGCGGGTCGACCACCTGACCGAGGAGCTGGCACGACGCCAGCAGAGCAACGACGCCTTGGTGCAGGAAACGCGCGTGCTG TCGCGCAACGCGCAGGACACCGTCAAGGAGCTGCAGGCCAAGGTCGGCGCGCTGGACGGCCAGGTCGGCGAGACCCGCGA CAAGCAGGTCGCGCTCGAACAGGTCTACCAGGACCTGATGCGCAACCGCGATGATTGGGAAATCGCCGAGATCCAGCAGT TGCTGACCAATGCCGGCCAGCAGCTCCAGCTCACCGGCAACGTCCAGGTCGCACTGGCCGCGCTGCAGAGTGCCGACGCA CGTCTGGCCCGCACCGACAAGCCGCAGTACAACCTGCTGCGGCGCGCACTGGCGCGCGATATCGCGCGCATGAAGGCGGT GCCCGATACCGACCTGACCGGCGCTGCCATCAAGCTTGATGAAGCCATCAACCAGATCGACGCGCTGCCGCTGTTGTCCA GCGAACGCATGCTCGAGCGTACCGAGGCCGAAGACCGCAAGGATGCCGGCCGTGGCGCTGCTGCCAAGGGTACACGCGAG GCCTCTGCCCCGGCATCGGGCGGCGTAGGCAACTGGTTCGCCCGGCTGTGGAATTACATGCGCGATGAAATGGCGCAGGT TATCCGCATCCGCAAGGTCGATGACACTGAAGCGCTGTTGCTGTCGGGGGACCAGGGCTGGTTCCTGCGCGAGAACGTCA AGCTGCGCATGCTCAATGCACGCCTGGCGCTGCTGTCGCGCAATGAGCCGGTCTTCCGCAATGACCTTGCCGCGGCGCAA GCCATGATCGGCCGTTATTTCGACACGAGGTCAAGGCGCGTGCAAACCGTGCTCACGCTGCTCAAGCAGGCGCAGGCTGG CGCGGTGACGGTGCAGTTGCCGACCATGGCGGAAAGCCTCGGCGCGCTGCACGCGCTGAAGAAGGAGTAA
Upstream 100 bases:
>100_bases CGCGTCGGCCGCGCGGGATCTGCTCTCGCAGGGCGCCGCCGAGATTCTCGCCGCGCTGGCCGACACACCGGCTCCCCAAG ATCCAGCCTGAGGCCGGCCC
Downstream 100 bases:
>100_bases CCATGCGCCTGCTTTTCTGGGTCGCGATCCTGTTCGGCGGTGCGGTCGGGCTGGCGCTGTTCACGCAGTTCAACCACAGC AATGTGGTGCTGTTCTATCC
Product: bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase
Products: NA
Alternate protein names: Urogen-III methylase; ORF X [H]
Number of amino acids: Translated: 689; Mature: 688
Protein sequence:
>689_residues MPRPTVVVTRPAGQSRQLTEALQAAGLDVLGFPLLSIGPAADDAPLRAALARLDQFALVIFVSPNAIQYAVDALAVVQGI AAAQWPPGVPVAVVGPASVMALAERGIVAPDYRVIAPAGADGNGTNGGANCEEARFDSEALWAQLEPAALQGRSVLIVRG NGGRDWLGDRLREAGADVTAVEAYQRTLPEPTAMQWQAVRDGLSPGAAPQAWLLTSSEAVRNLETLARHNLSPQELATLK QVQCIAPHARIAEQAQALGFTRILRAAPGDAGLLAACKQWADAYAGPIAASTPVPAVAPAPRPEPLPVPPPAMTNRVERV TQETTSSSTTIPPGATASASPSASFAAPRRNAALWALVAVLVLATAGGFWWLQQRVDHLTEELARRQQSNDALVQETRVL SRNAQDTVKELQAKVGALDGQVGETRDKQVALEQVYQDLMRNRDDWEIAEIQQLLTNAGQQLQLTGNVQVALAALQSADA RLARTDKPQYNLLRRALARDIARMKAVPDTDLTGAAIKLDEAINQIDALPLLSSERMLERTEAEDRKDAGRGAAAKGTRE ASAPASGGVGNWFARLWNYMRDEMAQVIRIRKVDDTEALLLSGDQGWFLRENVKLRMLNARLALLSRNEPVFRNDLAAAQ AMIGRYFDTRSRRVQTVLTLLKQAQAGAVTVQLPTMAESLGALHALKKE
Sequences:
>Translated_689_residues MPRPTVVVTRPAGQSRQLTEALQAAGLDVLGFPLLSIGPAADDAPLRAALARLDQFALVIFVSPNAIQYAVDALAVVQGI AAAQWPPGVPVAVVGPASVMALAERGIVAPDYRVIAPAGADGNGTNGGANCEEARFDSEALWAQLEPAALQGRSVLIVRG NGGRDWLGDRLREAGADVTAVEAYQRTLPEPTAMQWQAVRDGLSPGAAPQAWLLTSSEAVRNLETLARHNLSPQELATLK QVQCIAPHARIAEQAQALGFTRILRAAPGDAGLLAACKQWADAYAGPIAASTPVPAVAPAPRPEPLPVPPPAMTNRVERV TQETTSSSTTIPPGATASASPSASFAAPRRNAALWALVAVLVLATAGGFWWLQQRVDHLTEELARRQQSNDALVQETRVL SRNAQDTVKELQAKVGALDGQVGETRDKQVALEQVYQDLMRNRDDWEIAEIQQLLTNAGQQLQLTGNVQVALAALQSADA RLARTDKPQYNLLRRALARDIARMKAVPDTDLTGAAIKLDEAINQIDALPLLSSERMLERTEAEDRKDAGRGAAAKGTRE ASAPASGGVGNWFARLWNYMRDEMAQVIRIRKVDDTEALLLSGDQGWFLRENVKLRMLNARLALLSRNEPVFRNDLAAAQ AMIGRYFDTRSRRVQTVLTLLKQAQAGAVTVQLPTMAESLGALHALKKE >Mature_688_residues PRPTVVVTRPAGQSRQLTEALQAAGLDVLGFPLLSIGPAADDAPLRAALARLDQFALVIFVSPNAIQYAVDALAVVQGIA AAQWPPGVPVAVVGPASVMALAERGIVAPDYRVIAPAGADGNGTNGGANCEEARFDSEALWAQLEPAALQGRSVLIVRGN GGRDWLGDRLREAGADVTAVEAYQRTLPEPTAMQWQAVRDGLSPGAAPQAWLLTSSEAVRNLETLARHNLSPQELATLKQ VQCIAPHARIAEQAQALGFTRILRAAPGDAGLLAACKQWADAYAGPIAASTPVPAVAPAPRPEPLPVPPPAMTNRVERVT QETTSSSTTIPPGATASASPSASFAAPRRNAALWALVAVLVLATAGGFWWLQQRVDHLTEELARRQQSNDALVQETRVLS RNAQDTVKELQAKVGALDGQVGETRDKQVALEQVYQDLMRNRDDWEIAEIQQLLTNAGQQLQLTGNVQVALAALQSADAR LARTDKPQYNLLRRALARDIARMKAVPDTDLTGAAIKLDEAINQIDALPLLSSERMLERTEAEDRKDAGRGAAAKGTREA SAPASGGVGNWFARLWNYMRDEMAQVIRIRKVDDTEALLLSGDQGWFLRENVKLRMLNARLALLSRNEPVFRNDLAAAQA MIGRYFDTRSRRVQTVLTLLKQAQAGAVTVQLPTMAESLGALHALKKE
Specific function: Siroheme and cobalamin biosynthesis. [C]
COG id: COG2959
COG function: function code H; Uncharacterized enzyme of heme biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790235, Length=241, Percent_Identity=29.4605809128631, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1790236, Length=272, Percent_Identity=26.4705882352941, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007470 [H]
Pfam domain/function: PF04375 HemX [H]
EC number: =2.1.1.107 [H]
Molecular weight: Translated: 73874; Mature: 73743
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPTVVVTRPAGQSRQLTEALQAAGLDVLGFPLLSIGPAADDAPLRAALARLDQFALVI CCCCCEEEECCCCCCHHHHHHHHHCCCCHHCCHHHHCCCCCCCHHHHHHHHHHCCEEEEE FVSPNAIQYAVDALAVVQGIAAAQWPPGVPVAVVGPASVMALAERGIVAPDYRVIAPAGA EECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHCCCCCCCCEEEEECCC DGNGTNGGANCEEARFDSEALWAQLEPAALQGRSVLIVRGNGGRDWLGDRLREAGADVTA CCCCCCCCCCCHHHHCCHHHHHHHCCHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCHHH VEAYQRTLPEPTAMQWQAVRDGLSPGAAPQAWLLTSSEAVRNLETLARHNLSPQELATLK HHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCHHHHHHHH QVQCIAPHARIAEQAQALGFTRILRAAPGDAGLLAACKQWADAYAGPIAASTPVPAVAPA HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PRPEPLPVPPPAMTNRVERVTQETTSSSTTIPPGATASASPSASFAAPRRNAALWALVAV CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LVLATAGGFWWLQQRVDHLTEELARRQQSNDALVQETRVLSRNAQDTVKELQAKVGALDG HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC QVGETRDKQVALEQVYQDLMRNRDDWEIAEIQQLLTNAGQQLQLTGNVQVALAALQSADA CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCH RLARTDKPQYNLLRRALARDIARMKAVPDTDLTGAAIKLDEAINQIDALPLLSSERMLER HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHCCCCCCHHHHHHH TEAEDRKDAGRGAAAKGTREASAPASGGVGNWFARLWNYMRDEMAQVIRIRKVDDTEALL HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LSGDQGWFLRENVKLRMLNARLALLSRNEPVFRNDLAAAQAMIGRYFDTRSRRVQTVLTL EECCCCCEEECCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQAQAGAVTVQLPTMAESLGALHALKKE HHHHCCCEEEEECCHHHHHHHHHHHHHCC >Mature Secondary Structure PRPTVVVTRPAGQSRQLTEALQAAGLDVLGFPLLSIGPAADDAPLRAALARLDQFALVI CCCCEEEECCCCCCHHHHHHHHHCCCCHHCCHHHHCCCCCCCHHHHHHHHHHCCEEEEE FVSPNAIQYAVDALAVVQGIAAAQWPPGVPVAVVGPASVMALAERGIVAPDYRVIAPAGA EECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHCCCCCCCCEEEEECCC DGNGTNGGANCEEARFDSEALWAQLEPAALQGRSVLIVRGNGGRDWLGDRLREAGADVTA CCCCCCCCCCCHHHHCCHHHHHHHCCHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCHHH VEAYQRTLPEPTAMQWQAVRDGLSPGAAPQAWLLTSSEAVRNLETLARHNLSPQELATLK HHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCHHHHHHHH QVQCIAPHARIAEQAQALGFTRILRAAPGDAGLLAACKQWADAYAGPIAASTPVPAVAPA HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PRPEPLPVPPPAMTNRVERVTQETTSSSTTIPPGATASASPSASFAAPRRNAALWALVAV CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LVLATAGGFWWLQQRVDHLTEELARRQQSNDALVQETRVLSRNAQDTVKELQAKVGALDG HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC QVGETRDKQVALEQVYQDLMRNRDDWEIAEIQQLLTNAGQQLQLTGNVQVALAALQSADA CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCH RLARTDKPQYNLLRRALARDIARMKAVPDTDLTGAAIKLDEAINQIDALPLLSSERMLER HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHCCCCCCHHHHHHH TEAEDRKDAGRGAAAKGTREASAPASGGVGNWFARLWNYMRDEMAQVIRIRKVDDTEALL HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LSGDQGWFLRENVKLRMLNARLALLSRNEPVFRNDLAAAQAMIGRYFDTRSRRVQTVLTL EECCCCCEEECCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQAQAGAVTVQLPTMAESLGALHALKKE HHHHCCCEEEEECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3062586; 3054815; 1379743; 9278503; 9298646 [H]