| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is pgk [H]
Identifier: 73540265
GI number: 73540265
Start: 605461
End: 606657
Strand: Reverse
Name: pgk [H]
Synonym: Reut_A0559
Alternate gene names: 73540265
Gene position: 606657-605461 (Counterclockwise)
Preceding gene: 73540268
Following gene: 73540264
Centisome position: 15.94
GC content: 66.08
Gene sequence:
>1197_bases ATGACCTCCGTCCTGCGTCTATCCGACCTCATCTCCCAAGGCAAAATCTCCGGCAAGCGTGTTTTTATCCGCGCCGACAT GAATGTGCCGCAGGATGACGCCGGCAATATCACCGAGGACACCCGCATCCGCGCTTCGGTGCCGGCCATCGAGGCCTGCC TGGCTGCTGGCGCCGCCGTGATGGTCACGTCGCACCTGGGCCGCCCGACCGAAGGCGAGTTCAAGCCGGCCGATTCGCTG GCGCCGATTGCCACGCGCCTGTCCGAACTGCTGGGCAAGCCGGTGAAGCTGGTGCAGAACTGGGTCGATGGCGTGGAGGT CGCTCCGGGTCAGGTGGTGCTGCTGGAAAACTGCCGCGTGAACAAGGGCGAAAAGAAGAACAGCGACGAACTGGCGCAGA AGATGGCCAAGCTGTGCGACGTGTACGTCAATGACGCGTTCGGCACCGCTCACCGCGCCGAAGCGACCACGCACGGCATC GCCAAGTACGCGCCGATCGCCTGCGCCGGCCCGCTGCTGGCCGCCGAGATCGACGCGCTGGGCAAGGCGCTGGGCCAGCC GGCGCGTCCGCTGGTCGCCATCGTGGCCGGCTCGAAGGTCTCGACCAAGCTGACCATCCTGAAGTCGCTGGCCGACAAGG TGGACAACCTGATCGTCGGCGGCGGCATCGCCAACACCTTCATGCTGGCCGCCGGCCTGAAGATCGGCAAGTCGCTGGCC GAAGCCGACCTGGTGGCCGATGCCAAGACCATCATCGACATCATGGCCAAGCGCGGTGCCTCGGTACCCATTCCGGTCGA CGTCGTGTGCGCCAAGGCGTTCAGCGCCACCGCCGCCGCCACCGTCAAGGACGTCAAGGACGTGGCCGACGACGACATGA TCCTCGACATCGGGCCGAAGACCGCCGCGCAATTGGCCGACCAGCTCAAGGCTGCCGGTACCATCGTGTGGAACGGCCCG GTGGGCGTGTTCGAGTTCGACCAGTTCGGCAACGGCACCAAGGTGCTGGCCGAAGCCATCGCCGATTCCAAGGCATTCTC GATCGCCGGCGGCGGCGACACGCTGGCCGCCATCGCCAAGTACGGCATTGCCGACCGCGTGGGCTATATCTCGACCGGCG GCGGCGCGTTCCTGGAGTTCCTGGAAGGCAAGAAGCTGCCCGCATTCGAAGTGCTGGAGCAACGCGCAGCAGGCTGA
Upstream 100 bases:
>100_bases GTCGTTGCGCCCGGTCCCAAACCGGCTAAGCAATGACTGCGATCAGGTAAAATGATTGTTTCCCCGAAATTTCAGCGAAA TCTCGCGCCATCACACCGTC
Downstream 100 bases:
>100_bases GGCCGCGCTGGCCCGCGTCCGGACAAGGATCCCCCGCCATGACCCGCTCCACCAAGATCGTCGCCACCATCGGCCCCGCT TCCAGCTCGCTGGAAGTGCT
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTSVLRLSDLISQGKISGKRVFIRADMNVPQDDAGNITEDTRIRASVPAIEACLAAGAAVMVTSHLGRPTEGEFKPADSL APIATRLSELLGKPVKLVQNWVDGVEVAPGQVVLLENCRVNKGEKKNSDELAQKMAKLCDVYVNDAFGTAHRAEATTHGI AKYAPIACAGPLLAAEIDALGKALGQPARPLVAIVAGSKVSTKLTILKSLADKVDNLIVGGGIANTFMLAAGLKIGKSLA EADLVADAKTIIDIMAKRGASVPIPVDVVCAKAFSATAAATVKDVKDVADDDMILDIGPKTAAQLADQLKAAGTIVWNGP VGVFEFDQFGNGTKVLAEAIADSKAFSIAGGGDTLAAIAKYGIADRVGYISTGGGAFLEFLEGKKLPAFEVLEQRAAG
Sequences:
>Translated_398_residues MTSVLRLSDLISQGKISGKRVFIRADMNVPQDDAGNITEDTRIRASVPAIEACLAAGAAVMVTSHLGRPTEGEFKPADSL APIATRLSELLGKPVKLVQNWVDGVEVAPGQVVLLENCRVNKGEKKNSDELAQKMAKLCDVYVNDAFGTAHRAEATTHGI AKYAPIACAGPLLAAEIDALGKALGQPARPLVAIVAGSKVSTKLTILKSLADKVDNLIVGGGIANTFMLAAGLKIGKSLA EADLVADAKTIIDIMAKRGASVPIPVDVVCAKAFSATAAATVKDVKDVADDDMILDIGPKTAAQLADQLKAAGTIVWNGP VGVFEFDQFGNGTKVLAEAIADSKAFSIAGGGDTLAAIAKYGIADRVGYISTGGGAFLEFLEGKKLPAFEVLEQRAAG >Mature_397_residues TSVLRLSDLISQGKISGKRVFIRADMNVPQDDAGNITEDTRIRASVPAIEACLAAGAAVMVTSHLGRPTEGEFKPADSLA PIATRLSELLGKPVKLVQNWVDGVEVAPGQVVLLENCRVNKGEKKNSDELAQKMAKLCDVYVNDAFGTAHRAEATTHGIA KYAPIACAGPLLAAEIDALGKALGQPARPLVAIVAGSKVSTKLTILKSLADKVDNLIVGGGIANTFMLAAGLKIGKSLAE ADLVADAKTIIDIMAKRGASVPIPVDVVCAKAFSATAAATVKDVKDVADDDMILDIGPKTAAQLADQLKAAGTIVWNGPV GVFEFDQFGNGTKVLAEAIADSKAFSIAGGGDTLAAIAKYGIADRVGYISTGGGAFLEFLEGKKLPAFEVLEQRAAG
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI31543397, Length=412, Percent_Identity=42.4757281553398, Blast_Score=268, Evalue=8e-72, Organism=Homo sapiens, GI4505763, Length=425, Percent_Identity=39.0588235294118, Blast_Score=256, Evalue=2e-68, Organism=Escherichia coli, GI1789294, Length=394, Percent_Identity=62.1827411167513, Blast_Score=480, Evalue=1e-137, Organism=Caenorhabditis elegans, GI17508823, Length=420, Percent_Identity=42.3809523809524, Blast_Score=283, Evalue=1e-76, Organism=Saccharomyces cerevisiae, GI6319857, Length=424, Percent_Identity=41.0377358490566, Blast_Score=265, Evalue=9e-72, Organism=Drosophila melanogaster, GI17136394, Length=405, Percent_Identity=40, Blast_Score=245, Evalue=3e-65, Organism=Drosophila melanogaster, GI24581203, Length=403, Percent_Identity=36.7245657568238, Blast_Score=227, Evalue=1e-59,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 41144; Mature: 41013
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVLRLSDLISQGKISGKRVFIRADMNVPQDDAGNITEDTRIRASVPAIEACLAAGAAV CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCHHH MVTSHLGRPTEGEFKPADSLAPIATRLSELLGKPVKLVQNWVDGVEVAPGQVVLLENCRV HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCEEEEECCCC NKGEKKNSDELAQKMAKLCDVYVNDAFGTAHRAEATTHGIAKYAPIACAGPLLAAEIDAL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHH GKALGQPARPLVAIVAGSKVSTKLTILKSLADKVDNLIVGGGIANTFMLAAGLKIGKSLA HHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHH EADLVADAKTIIDIMAKRGASVPIPVDVVCAKAFSATAAATVKDVKDVADDDMILDIGPK HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCH TAAQLADQLKAAGTIVWNGPVGVFEFDQFGNGTKVLAEAIADSKAFSIAGGGDTLAAIAK HHHHHHHHHHHCCEEEECCCCCEEEHHCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHH YGIADRVGYISTGGGAFLEFLEGKKLPAFEVLEQRAAG HCHHHCCCEEECCHHHHHHHHCCCCCCHHHHHHHHCCC >Mature Secondary Structure TSVLRLSDLISQGKISGKRVFIRADMNVPQDDAGNITEDTRIRASVPAIEACLAAGAAV CCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCHHH MVTSHLGRPTEGEFKPADSLAPIATRLSELLGKPVKLVQNWVDGVEVAPGQVVLLENCRV HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCCEEEEECCCC NKGEKKNSDELAQKMAKLCDVYVNDAFGTAHRAEATTHGIAKYAPIACAGPLLAAEIDAL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHH GKALGQPARPLVAIVAGSKVSTKLTILKSLADKVDNLIVGGGIANTFMLAAGLKIGKSLA HHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHH EADLVADAKTIIDIMAKRGASVPIPVDVVCAKAFSATAAATVKDVKDVADDDMILDIGPK HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCH TAAQLADQLKAAGTIVWNGPVGVFEFDQFGNGTKVLAEAIADSKAFSIAGGGDTLAAIAK HHHHHHHHHHHCCEEEECCCCCEEEHHCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHH YGIADRVGYISTGGGAFLEFLEGKKLPAFEVLEQRAAG HCHHHCCCEEECCHHHHHHHHCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]