| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is purK [H]
Identifier: 73540260
GI number: 73540260
Start: 599985
End: 601229
Strand: Reverse
Name: purK [H]
Synonym: Reut_A0554
Alternate gene names: 73540260
Gene position: 601229-599985 (Counterclockwise)
Preceding gene: 73540261
Following gene: 73540259
Centisome position: 15.79
GC content: 67.15
Gene sequence:
>1245_bases ATGCCGACCGATATCCATCCCTACCTCTCCGAAGCCCACACGCCGGAGTCGCGCGCCGAATTTGGCGTCGACAACCCCAG CGCGCCCATCCTGCCCGGCGCCTGGCTCGGCATGCTCGGCGGCGGTCAGCTTGGCCGCATGTTCACGCATGCGGCGCAGA GCATGGGCTATCGCGTCTGCGTGCTCGACCCGGACCAGGACAGCCCTGCCGGCTCCGTGGCCGACAAGCATATCTGCGCA CCCTACACCGATGAGGCCGCGCTCGCCGAGATGGCAAAGCTGTGCCAGGCCGTCAGCACGGAATTCGAAAACGTGCCATC GCTATCGCTGGACCGGCTCGAACAGCTAGGCGCCTTTGTCGCGCCGCGCGGCTATTGCGTGTCGATTGCGCAGAACCGCA TCGGCGAGAAGAAGTTCTTTGCCTCGTGCGCCGAGCGTACCGGCGTGCCAACCGCACCGCACTGGGTGATCCAGCACGAT GCGGATGTCGACCAGTTGCCCGACACGGTGCTGCCCGGCATCCTCAAGACCGCGCGGATGGGCTACGACGGCAAGGGCCA GGCCCGCGTGAAGACGCGCGAAGACGTGCGCGCGGCATGGAAGGCCATGCAGCACGTGCCATGCGTGCTCGAGCAGATGC TGCCGCTGGCCTACGAGGTCTCGGTGCTGGCCGCACGCGCCGCCGATGGCAGCACCGCCACCTGGCCGCTGGCCGAGAAC GTGCATCGCGACGGCATCCTGTTCTCGACGGAGATGCCGTCGGCCAGCGTGTCGGCCGACATCGCCGACCGCGCCCGTGC CGCCGCCGCGACCATCGCCACGGAAATGGGCTATGTGGGCGTGCTGTGCATCGAATTCTTCGTGCTCACCGACGGCTCGC TGATCGCCAATGAAATGGCGCCGCGTCCGCACAACTCCGGCCACATCACCATGGACGCGTGCGAGACCAGCCAGTTCGAG CAACAGGTGCGTGCCATGGCCCGCCTGCCGCTGGGCAGCACGCGCCAGCATTCGGCCGGCAAGATGCTGAACCTGCTTGG CGATGTATGGTTCGAGTTCGGTTTGGAGCGCACGCCGGCATGGGATGAAGTGCTGGCCCAGCCCGGCGCCAAGCTGCACC TGTACGGCAAGAGCGACGCGCGCCCGTCGCGCAAGATGGGCCATGTGAACTGCATTGGCGAGCATGCCGAGGCCGCCGCG CAAGCGTTCGATGTCGCTGCGAAGGCGCTGCACATCCCGCTCTGA
Upstream 100 bases:
>100_bases CTGGAAGCATTCCGCGCCAGGCAGACCGAAGCCGCGCGCGCGATGACGCTGCCGCTGTAATCCATCGCGCAGTAACCCCC GGAAACCACGGAACCGAGCA
Downstream 100 bases:
>100_bases TCCAATCTGACCCTATCCGTCTCGCCCGCTTCAAGGAACACGATGTCGCGCATGCCCACGGCCGCCGAACTGGACGAAGC CGTCCGCCTGCTGGAGGCCG
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MPTDIHPYLSEAHTPESRAEFGVDNPSAPILPGAWLGMLGGGQLGRMFTHAAQSMGYRVCVLDPDQDSPAGSVADKHICA PYTDEAALAEMAKLCQAVSTEFENVPSLSLDRLEQLGAFVAPRGYCVSIAQNRIGEKKFFASCAERTGVPTAPHWVIQHD ADVDQLPDTVLPGILKTARMGYDGKGQARVKTREDVRAAWKAMQHVPCVLEQMLPLAYEVSVLAARAADGSTATWPLAEN VHRDGILFSTEMPSASVSADIADRARAAAATIATEMGYVGVLCIEFFVLTDGSLIANEMAPRPHNSGHITMDACETSQFE QQVRAMARLPLGSTRQHSAGKMLNLLGDVWFEFGLERTPAWDEVLAQPGAKLHLYGKSDARPSRKMGHVNCIGEHAEAAA QAFDVAAKALHIPL
Sequences:
>Translated_414_residues MPTDIHPYLSEAHTPESRAEFGVDNPSAPILPGAWLGMLGGGQLGRMFTHAAQSMGYRVCVLDPDQDSPAGSVADKHICA PYTDEAALAEMAKLCQAVSTEFENVPSLSLDRLEQLGAFVAPRGYCVSIAQNRIGEKKFFASCAERTGVPTAPHWVIQHD ADVDQLPDTVLPGILKTARMGYDGKGQARVKTREDVRAAWKAMQHVPCVLEQMLPLAYEVSVLAARAADGSTATWPLAEN VHRDGILFSTEMPSASVSADIADRARAAAATIATEMGYVGVLCIEFFVLTDGSLIANEMAPRPHNSGHITMDACETSQFE QQVRAMARLPLGSTRQHSAGKMLNLLGDVWFEFGLERTPAWDEVLAQPGAKLHLYGKSDARPSRKMGHVNCIGEHAEAAA QAFDVAAKALHIPL >Mature_413_residues PTDIHPYLSEAHTPESRAEFGVDNPSAPILPGAWLGMLGGGQLGRMFTHAAQSMGYRVCVLDPDQDSPAGSVADKHICAP YTDEAALAEMAKLCQAVSTEFENVPSLSLDRLEQLGAFVAPRGYCVSIAQNRIGEKKFFASCAERTGVPTAPHWVIQHDA DVDQLPDTVLPGILKTARMGYDGKGQARVKTREDVRAAWKAMQHVPCVLEQMLPLAYEVSVLAARAADGSTATWPLAENV HRDGILFSTEMPSASVSADIADRARAAAATIATEMGYVGVLCIEFFVLTDGSLIANEMAPRPHNSGHITMDACETSQFEQ QVRAMARLPLGSTRQHSAGKMLNLLGDVWFEFGLERTPAWDEVLAQPGAKLHLYGKSDARPSRKMGHVNCIGEHAEAAAQ AFDVAAKALHIPL
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=359, Percent_Identity=33.1476323119777, Blast_Score=151, Evalue=6e-38, Organism=Escherichia coli, GI1788155, Length=361, Percent_Identity=26.8698060941828, Blast_Score=112, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6324702, Length=391, Percent_Identity=28.9002557544757, Blast_Score=190, Evalue=5e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 44595; Mature: 44464
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDIHPYLSEAHTPESRAEFGVDNPSAPILPGAWLGMLGGGQLGRMFTHAAQSMGYRVC CCCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEE VLDPDQDSPAGSVADKHICAPYTDEAALAEMAKLCQAVSTEFENVPSLSLDRLEQLGAFV EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH APRGYCVSIAQNRIGEKKFFASCAERTGVPTAPHWVIQHDADVDQLPDTVLPGILKTARM CCCCCEEHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHCCHHHHHHHHHHHHC GYDGKGQARVKTREDVRAAWKAMQHVPCVLEQMLPLAYEVSVLAARAADGSTATWPLAEN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHC VHRDGILFSTEMPSASVSADIADRARAAAATIATEMGYVGVLCIEFFVLTDGSLIANEMA CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC PRPHNSGHITMDACETSQFEQQVRAMARLPLGSTRQHSAGKMLNLLGDVWFEFGLERTPA CCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC WDEVLAQPGAKLHLYGKSDARPSRKMGHVNCIGEHAEAAAQAFDVAAKALHIPL HHHHHHCCCCEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PTDIHPYLSEAHTPESRAEFGVDNPSAPILPGAWLGMLGGGQLGRMFTHAAQSMGYRVC CCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEE VLDPDQDSPAGSVADKHICAPYTDEAALAEMAKLCQAVSTEFENVPSLSLDRLEQLGAFV EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH APRGYCVSIAQNRIGEKKFFASCAERTGVPTAPHWVIQHDADVDQLPDTVLPGILKTARM CCCCCEEHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHCCHHHHHHHHHHHHC GYDGKGQARVKTREDVRAAWKAMQHVPCVLEQMLPLAYEVSVLAARAADGSTATWPLAEN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHC VHRDGILFSTEMPSASVSADIADRARAAAATIATEMGYVGVLCIEFFVLTDGSLIANEMA CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC PRPHNSGHITMDACETSQFEQQVRAMARLPLGSTRQHSAGKMLNLLGDVWFEFGLERTPA CCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC WDEVLAQPGAKLHLYGKSDARPSRKMGHVNCIGEHAEAAAQAFDVAAKALHIPL HHHHHHCCCCEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]