Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is cutS [H]
Identifier: 73540131
GI number: 73540131
Start: 466050
End: 466559
Strand: Reverse
Name: cutS [H]
Synonym: Reut_A0425
Alternate gene names: 73540131
Gene position: 466559-466050 (Counterclockwise)
Preceding gene: 73540149
Following gene: 73540130
Centisome position: 12.26
GC content: 66.67
Gene sequence:
>510_bases ATGCCGATTCCGATCCGCCTGACGGTCAATGGCAAGGCCGTTGACGCTCAGGTAGAACCCAACACCCTACTCGTCCAGTT CCTCCGCGAACAGCTCCGGCTGACCGGCACGCATGTCGGCTGCGATACCGCGCAGTGCGGCGCCTGCACGATCCACCTGG ACGGGCGCGCGGTCAAGTCCTGCAATATCCTCGCCGTGCAGGCCGATGGCGCCGAGGTTACGACCATTGAGGGCCTCGCA GGCATACGCGTGGGCAACGGGTCTCCGGCCATGCACCCGATGCAGGAAGCCTTCCGCGAATGCCACGGCCTGCAATGCGG CTTCTGCACGCCCGGCATGGTCATGGCAGCCACGGCGCTCGTGAACGCGCGGCCGGATGCCGATGCCACCACCATCCGCC AGCAACTCGAAGGCAACCTGTGCCGCTGCACCGGTTATCACAACATCGTCAAGGCCGTGCAGCAGGGCCAGGCCGCCATG CTCGCGGGCACCGCCGCGAGCGCCGAGTAA
Upstream 100 bases:
>100_bases AGCCGTAGCAAACGGCAGTACCGCGTCGTGGCCAGTCCCGCGCTGTTCTTTCGGGTTCCTGGGAATTGGTCATGCGCTTC CACCCCTCATGGAGACAAGC
Downstream 100 bases:
>100_bases GGGAGGCCAGCCATGAACGCACCCGAATCGCAGAAATTCGTCGGCACGGCGGTCAAGCGCAAGGAAGACTTCCGCTTCCT GACCGGCAACGGCCAGTACA
Product: ferredoxin:(2Fe-2S)-binding
Products: NA
Alternate protein names: CO dehydrogenase subunit S; CO-DH S [H]
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MPIPIRLTVNGKAVDAQVEPNTLLVQFLREQLRLTGTHVGCDTAQCGACTIHLDGRAVKSCNILAVQADGAEVTTIEGLA GIRVGNGSPAMHPMQEAFRECHGLQCGFCTPGMVMAATALVNARPDADATTIRQQLEGNLCRCTGYHNIVKAVQQGQAAM LAGTAASAE
Sequences:
>Translated_169_residues MPIPIRLTVNGKAVDAQVEPNTLLVQFLREQLRLTGTHVGCDTAQCGACTIHLDGRAVKSCNILAVQADGAEVTTIEGLA GIRVGNGSPAMHPMQEAFRECHGLQCGFCTPGMVMAATALVNARPDADATTIRQQLEGNLCRCTGYHNIVKAVQQGQAAM LAGTAASAE >Mature_168_residues PIPIRLTVNGKAVDAQVEPNTLLVQFLREQLRLTGTHVGCDTAQCGACTIHLDGRAVKSCNILAVQADGAEVTTIEGLAG IRVGNGSPAMHPMQEAFRECHGLQCGFCTPGMVMAATALVNARPDADATTIRQQLEGNLCRCTGYHNIVKAVQQGQAAML AGTAASAE
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI71773480, Length=157, Percent_Identity=38.8535031847134, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI91823271, Length=157, Percent_Identity=37.5796178343949, Blast_Score=92, Evalue=3e-19, Organism=Escherichia coli, GI1786480, Length=169, Percent_Identity=41.4201183431953, Blast_Score=130, Evalue=6e-32, Organism=Escherichia coli, GI1789232, Length=154, Percent_Identity=44.1558441558442, Blast_Score=114, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17540638, Length=153, Percent_Identity=43.1372549019608, Blast_Score=127, Evalue=2e-30, Organism=Caenorhabditis elegans, GI32566215, Length=165, Percent_Identity=36.969696969697, Blast_Score=109, Evalue=6e-25, Organism=Caenorhabditis elegans, GI17539860, Length=163, Percent_Identity=34.9693251533742, Blast_Score=106, Evalue=5e-24, Organism=Drosophila melanogaster, GI17737937, Length=159, Percent_Identity=40.251572327044, Blast_Score=110, Evalue=3e-25, Organism=Drosophila melanogaster, GI24647197, Length=164, Percent_Identity=36.5853658536585, Blast_Score=96, Evalue=8e-21, Organism=Drosophila melanogaster, GI24647195, Length=164, Percent_Identity=36.5853658536585, Blast_Score=96, Evalue=9e-21, Organism=Drosophila melanogaster, GI24647193, Length=167, Percent_Identity=35.3293413173653, Blast_Score=87, Evalue=6e-18, Organism=Drosophila melanogaster, GI24647201, Length=156, Percent_Identity=35.2564102564103, Blast_Score=86, Evalue=8e-18, Organism=Drosophila melanogaster, GI24647199, Length=157, Percent_Identity=34.3949044585987, Blast_Score=86, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 17685; Mature: 17553
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPIRLTVNGKAVDAQVEPNTLLVQFLREQLRLTGTHVGCDTAQCGACTIHLDGRAVKS CCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEECC CNILAVQADGAEVTTIEGLAGIRVGNGSPAMHPMQEAFRECHGLQCGFCTPGMVMAATAL CEEEEEECCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHH VNARPDADATTIRQQLEGNLCRCTGYHNIVKAVQQGQAAMLAGTAASAE HCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHCCCEEEEECCCCCCC >Mature Secondary Structure PIPIRLTVNGKAVDAQVEPNTLLVQFLREQLRLTGTHVGCDTAQCGACTIHLDGRAVKS CEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEECC CNILAVQADGAEVTTIEGLAGIRVGNGSPAMHPMQEAFRECHGLQCGFCTPGMVMAATAL CEEEEEECCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHH VNARPDADATTIRQQLEGNLCRCTGYHNIVKAVQQGQAAMLAGTAASAE HCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]