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The map label for this gene is ftsY [H]

Identifier: 73540040

GI number: 73540040

Start: 363376

End: 364524

Strand: Reverse

Name: ftsY [H]

Synonym: Reut_A0334

Alternate gene names: 73540040

Gene position: 364524-363376 (Counterclockwise)

Preceding gene: 73540046

Following gene: 73540037

Centisome position: 9.58

GC content: 68.49

Gene sequence:

>1149_bases
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAGCCAGCCCCTGCGCCGGCAGAACCGCCCGCCTCGGCCCCCATTGCGGT
CCCCACGCCGGCTCCTGTGGACGCCCCTGCGGCCGTCCCCGTCGCCAGCCCCGATCCGTCGGCCGCCGCGGCTCCGTTGC
CCCCTGCCGCGCCGGCCATCCCGGCTGCGGCAGCCGTGCCGGCCGCGGGTGACATGGAGTTGACCCTGGCCGCGGCCCAG
ACCGCTGAAGCCCGCCGCGGCTGGATGCAGCGCCTGCGCACCGGCCTGTCCAAGACCAGCCGTAATATCAGCACGCTGTT
CGTCGGCATGAAGGTCGACGAGGCGCTGTTCGAAGAGCTCGAAACCGCGCTGCTGATGGCCGATGCCGGCGTCGAGGCGA
CCGAATACCTGCTCGGCGAGTTGCGCAAGCGTGTGCGCAGCGATCGCATCGAATCGGCCGAAGGCGTCAAGGCCGCGCTG
CGCGACCTGCTGATCCAGCTGCTGCGCCCGCTGGAAAAGACCATGGAGCTGGGCCGCGAGCAGCCGCTCGTGATGATGAT
CGCGGGCGTCAATGGCGCCGGCAAGACCACCAGCATCGGCAAACTGTGCAAGCACTTCCAGCACTACGGTCAGTCCGTGC
TGCTGGCAGCCGGCGACACCTTCCGCGCCGCTGCGCGCGAGCAACTCACCATCTGGGGCGAGCGCAACAACGTCACCGTG
GTCGCGCAGGAAAGCGGCGATCCGGCTGCGGTAATCTTCGATGCAGTCAACGCGGCGCGCGCGCGCGGCATCGATATCGT
GATGGCCGACACCGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTCAAGAAGGTCAAGCGCGTGATCAGCA
AGGCGATGCCCACGGCCCCGCACGAGGTCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGACACGT
GCGTTCGATGACGCGCTTGGCCTGACCGGGCTGATCGTGACCAAGCTCGACGGCACGGCCAAGGGTGGCATCCTCGCGGC
CATCGCGCGCCAGCGGCCGGTGCCGGTCTACTTCATCGGCGTCGGCGAGAAGGTGGAAGACCTGCAGCCGTTCAAGGCTG
AGGAATTTGCCGACGCGCTGCTCGGTTGA

Upstream 100 bases:

>100_bases
CGACAGGCTGATGGCGCGACCGGATACTGCGTACGGCCCGGATGATTAACGCGCCGCCGGACGGCGGCCGATCCTGACGG
GGTATTGACCCCTTTCCCCA

Downstream 100 bases:

>100_bases
TGACATCGCCCGAAAGAAAAAAACGCCCCGGCAAACCCGGGGCGTTTTTCATGGGCACTTTCCGCGCGCATCACTCCGCG
TCAGGCTGTTCCTTCGGCTG

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MFSFWKKRKAEPAPAPAEPPASAPIAVPTPAPVDAPAAVPVASPDPSAAAAPLPPAAPAIPAAAAVPAAGDMELTLAAAQ
TAEARRGWMQRLRTGLSKTSRNISTLFVGMKVDEALFEELETALLMADAGVEATEYLLGELRKRVRSDRIESAEGVKAAL
RDLLIQLLRPLEKTMELGREQPLVMMIAGVNGAGKTTSIGKLCKHFQHYGQSVLLAAGDTFRAAAREQLTIWGERNNVTV
VAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVKRVISKAMPTAPHEVLLVIDANTGQNALAQTR
AFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFKAEEFADALLG

Sequences:

>Translated_382_residues
MFSFWKKRKAEPAPAPAEPPASAPIAVPTPAPVDAPAAVPVASPDPSAAAAPLPPAAPAIPAAAAVPAAGDMELTLAAAQ
TAEARRGWMQRLRTGLSKTSRNISTLFVGMKVDEALFEELETALLMADAGVEATEYLLGELRKRVRSDRIESAEGVKAAL
RDLLIQLLRPLEKTMELGREQPLVMMIAGVNGAGKTTSIGKLCKHFQHYGQSVLLAAGDTFRAAAREQLTIWGERNNVTV
VAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVKRVISKAMPTAPHEVLLVIDANTGQNALAQTR
AFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFKAEEFADALLG
>Mature_382_residues
MFSFWKKRKAEPAPAPAEPPASAPIAVPTPAPVDAPAAVPVASPDPSAAAAPLPPAAPAIPAAAAVPAAGDMELTLAAAQ
TAEARRGWMQRLRTGLSKTSRNISTLFVGMKVDEALFEELETALLMADAGVEATEYLLGELRKRVRSDRIESAEGVKAAL
RDLLIQLLRPLEKTMELGREQPLVMMIAGVNGAGKTTSIGKLCKHFQHYGQSVLLAAGDTFRAAAREQLTIWGERNNVTV
VAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVKRVISKAMPTAPHEVLLVIDANTGQNALAQTR
AFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFKAEEFADALLG

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=279, Percent_Identity=34.0501792114695, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI226371618, Length=229, Percent_Identity=34.061135371179, Blast_Score=128, Evalue=9e-30,
Organism=Homo sapiens, GI295424842, Length=288, Percent_Identity=32.2916666666667, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI23308697, Length=288, Percent_Identity=32.2916666666667, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI89061728, Length=137, Percent_Identity=37.956204379562, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI1789874, Length=311, Percent_Identity=49.5176848874598, Blast_Score=298, Evalue=3e-82,
Organism=Escherichia coli, GI1788963, Length=296, Percent_Identity=34.4594594594595, Blast_Score=147, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17539958, Length=275, Percent_Identity=30.1818181818182, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI193206261, Length=298, Percent_Identity=31.2080536912752, Blast_Score=110, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=282, Percent_Identity=29.7872340425532, Blast_Score=127, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6320498, Length=317, Percent_Identity=25.8675078864353, Blast_Score=91, Evalue=3e-19,
Organism=Drosophila melanogaster, GI17647949, Length=279, Percent_Identity=33.3333333333333, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24641198, Length=262, Percent_Identity=29.7709923664122, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 40376; Mature: 40376

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSFWKKRKAEPAPAPAEPPASAPIAVPTPAPVDAPAAVPVASPDPSAAAAPLPPAAPAI
CCCCHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAAAAVPAAGDMELTLAAAQTAEARRGWMQRLRTGLSKTSRNISTLFVGMKVDEALFEEL
CCHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHH
ETALLMADAGVEATEYLLGELRKRVRSDRIESAEGVKAALRDLLIQLLRPLEKTMELGRE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QPLVMMIAGVNGAGKTTSIGKLCKHFQHYGQSVLLAAGDTFRAAAREQLTIWGERNNVTV
CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHCEEEEEECCCCEEE
VAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVKRVISKAMPTAP
EEECCCCCEEEEEHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
HEVLLVIDANTGQNALAQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIG
CEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEEE
VGEKVEDLQPFKAEEFADALLG
CCCCHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MFSFWKKRKAEPAPAPAEPPASAPIAVPTPAPVDAPAAVPVASPDPSAAAAPLPPAAPAI
CCCCHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAAAAVPAAGDMELTLAAAQTAEARRGWMQRLRTGLSKTSRNISTLFVGMKVDEALFEEL
CCHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHH
ETALLMADAGVEATEYLLGELRKRVRSDRIESAEGVKAALRDLLIQLLRPLEKTMELGRE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QPLVMMIAGVNGAGKTTSIGKLCKHFQHYGQSVLLAAGDTFRAAAREQLTIWGERNNVTV
CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHCEEEEEECCCCEEE
VAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVKRVISKAMPTAP
EEECCCCCEEEEEHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
HEVLLVIDANTGQNALAQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIG
CEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEEE
VGEKVEDLQPFKAEEFADALLG
CCCCHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]