| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is gpmA [H]
Identifier: 73540010
GI number: 73540010
Start: 336930
End: 337676
Strand: Reverse
Name: gpmA [H]
Synonym: Reut_A0304
Alternate gene names: 73540010
Gene position: 337676-336930 (Counterclockwise)
Preceding gene: 73540016
Following gene: 73540009
Centisome position: 8.87
GC content: 65.73
Gene sequence:
>747_bases ATGTACAAGCTAGTCCTCATCCGCCACGGCGAATCGACGTGGAACCTCGAAAACCGCTTCACCGGCTGGGTCGACGTCGA CCTGACTGACACCGGCGCCGCGCAAGCCCGCCTGGCCGGCAAGCTGCTCAAGGAAGCCGGCTTCGCCTTCGACGTGGCCT ACACGTCCGTGCTCAAGCGCGCGATCCGTACGCTGTGGCACGTGCAGGACGAAATGGACGAGATGTGGATCCCGGTACGC AACGAATGGCGCCTGAACGAGCGCCACTACGGTGCGCTGGCCGGCCTGAACAAGGCAGAAACCGCCGCCAAGTTCGGCGA CGAGCAGGTGCTCGTGTGGCGCCGCAGCTACGACACGCCGCCGCCCGCGCTGGAGCCGACCGATCCGCGTGCCTCTTACG ACGATCCGCGCTACGCCAATGTGCCGCGCGAGCAGATTCCGCTGACCGAATGCCTGAAGGACACCGTGGCCCGCGTGCTG CCGCTGTGGAACGAATCCATCGCTCCGGACATCCAATCGGGCAAGCGCGTGGTCATTGCCGCTCACGGCAACAGCATCCG CGCCCTGGTTAAGTACCTGGATCAGATTTCGGATGACGATATCGTCGGCCTCAACATCCCCAATGGCACCCCGCTCGTCT ACGAGCTGGACGCCAGCCTGCGCCCGCTGCGCCACTATTACCTGGGCGACCAGGAAGCCATCGCCGCCTCGCTGGCGGCC GTGGCCAGCCAGGGCAAGGCCCGCTGA
Upstream 100 bases:
>100_bases CGCCTCTTTGTCGCTTCCCGGGCACACAGGAACACCGGCAGGCGGCACCGATGCGGCGGCCCCGGCGCACGCAGGTTATT TACTCTCTGGAAGCAGCAGC
Downstream 100 bases:
>100_bases AGGCCCGCCGGGCGGCATGCACCACCCAAAGTGCGGCCGCCCACCGACAGCCGGTACGTGACAGGCCTATTTCTCCACAC CGTTTTATACTGTCGGACAA
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MYKLVLIRHGESTWNLENRFTGWVDVDLTDTGAAQARLAGKLLKEAGFAFDVAYTSVLKRAIRTLWHVQDEMDEMWIPVR NEWRLNERHYGALAGLNKAETAAKFGDEQVLVWRRSYDTPPPALEPTDPRASYDDPRYANVPREQIPLTECLKDTVARVL PLWNESIAPDIQSGKRVVIAAHGNSIRALVKYLDQISDDDIVGLNIPNGTPLVYELDASLRPLRHYYLGDQEAIAASLAA VASQGKAR
Sequences:
>Translated_248_residues MYKLVLIRHGESTWNLENRFTGWVDVDLTDTGAAQARLAGKLLKEAGFAFDVAYTSVLKRAIRTLWHVQDEMDEMWIPVR NEWRLNERHYGALAGLNKAETAAKFGDEQVLVWRRSYDTPPPALEPTDPRASYDDPRYANVPREQIPLTECLKDTVARVL PLWNESIAPDIQSGKRVVIAAHGNSIRALVKYLDQISDDDIVGLNIPNGTPLVYELDASLRPLRHYYLGDQEAIAASLAA VASQGKAR >Mature_248_residues MYKLVLIRHGESTWNLENRFTGWVDVDLTDTGAAQARLAGKLLKEAGFAFDVAYTSVLKRAIRTLWHVQDEMDEMWIPVR NEWRLNERHYGALAGLNKAETAAKFGDEQVLVWRRSYDTPPPALEPTDPRASYDDPRYANVPREQIPLTECLKDTVARVL PLWNESIAPDIQSGKRVVIAAHGNSIRALVKYLDQISDDDIVGLNIPNGTPLVYELDASLRPLRHYYLGDQEAIAASLAA VASQGKAR
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=250, Percent_Identity=54.4, Blast_Score=298, Evalue=3e-81, Organism=Homo sapiens, GI4505753, Length=250, Percent_Identity=58.4, Blast_Score=296, Evalue=2e-80, Organism=Homo sapiens, GI71274132, Length=250, Percent_Identity=56.4, Blast_Score=284, Evalue=7e-77, Organism=Homo sapiens, GI4502445, Length=252, Percent_Identity=50.3968253968254, Blast_Score=272, Evalue=2e-73, Organism=Homo sapiens, GI40353764, Length=252, Percent_Identity=50.3968253968254, Blast_Score=272, Evalue=2e-73, Organism=Homo sapiens, GI310129614, Length=162, Percent_Identity=61.7283950617284, Blast_Score=196, Evalue=2e-50, Organism=Escherichia coli, GI1786970, Length=246, Percent_Identity=62.6016260162602, Blast_Score=323, Evalue=9e-90, Organism=Saccharomyces cerevisiae, GI6322697, Length=246, Percent_Identity=53.6585365853659, Blast_Score=243, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6324516, Length=294, Percent_Identity=34.0136054421769, Blast_Score=143, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6320183, Length=296, Percent_Identity=30.7432432432432, Blast_Score=135, Evalue=7e-33, Organism=Drosophila melanogaster, GI24646216, Length=251, Percent_Identity=52.9880478087649, Blast_Score=270, Evalue=5e-73, Organism=Drosophila melanogaster, GI85725270, Length=251, Percent_Identity=52.5896414342629, Blast_Score=260, Evalue=6e-70, Organism=Drosophila melanogaster, GI85725272, Length=251, Percent_Identity=52.5896414342629, Blast_Score=260, Evalue=6e-70, Organism=Drosophila melanogaster, GI24650981, Length=251, Percent_Identity=52.5896414342629, Blast_Score=260, Evalue=6e-70, Organism=Drosophila melanogaster, GI28571815, Length=251, Percent_Identity=40.2390438247012, Blast_Score=185, Evalue=3e-47, Organism=Drosophila melanogaster, GI28571817, Length=251, Percent_Identity=40.2390438247012, Blast_Score=184, Evalue=4e-47, Organism=Drosophila melanogaster, GI24648979, Length=251, Percent_Identity=40.2390438247012, Blast_Score=184, Evalue=5e-47,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 27852; Mature: 27852
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKLVLIRHGESTWNLENRFTGWVDVDLTDTGAAQARLAGKLLKEAGFAFDVAYTSVLKR CEEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH AIRTLWHVQDEMDEMWIPVRNEWRLNERHYGALAGLNKAETAAKFGDEQVLVWRRSYDTP HHHHHHHHHHHHHHEECCCCCCEECCCHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCC PPALEPTDPRASYDDPRYANVPREQIPLTECLKDTVARVLPLWNESIAPDIQSGKRVVIA CCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE AHGNSIRALVKYLDQISDDDIVGLNIPNGTPLVYELDASLRPLRHYYLGDQEAIAASLAA ECCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHH VASQGKAR HHHCCCCC >Mature Secondary Structure MYKLVLIRHGESTWNLENRFTGWVDVDLTDTGAAQARLAGKLLKEAGFAFDVAYTSVLKR CEEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH AIRTLWHVQDEMDEMWIPVRNEWRLNERHYGALAGLNKAETAAKFGDEQVLVWRRSYDTP HHHHHHHHHHHHHHEECCCCCCEECCCHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCC PPALEPTDPRASYDDPRYANVPREQIPLTECLKDTVARVLPLWNESIAPDIQSGKRVVIA CCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE AHGNSIRALVKYLDQISDDDIVGLNIPNGTPLVYELDASLRPLRHYYLGDQEAIAASLAA ECCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHH VASQGKAR HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA