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The map label for this gene is ctpA [H]

Identifier: 73540009

GI number: 73540009

Start: 335160

End: 336758

Strand: Reverse

Name: ctpA [H]

Synonym: Reut_A0303

Alternate gene names: 73540009

Gene position: 336758-335160 (Counterclockwise)

Preceding gene: 73540010

Following gene: 73540008

Centisome position: 8.85

GC content: 65.23

Gene sequence:

>1599_bases
ATGCGTAAGACGCTCAAGAACATCAGCCTCGTTTCGGTCGGACTCGTCGCCGGCGTGCTGGCCACGCTGCAGATTTCAGC
CACCGCGCAGAATTCCGCCGGCCCCCTGCCACTCGACCAGTTGCGGCTGATGGCCGACATCTTCGGGCAGATCAAGCGCG
AATATGTAGAGCCGGTCGATGACAAGAAGCTGCTGACCGAAGCCATCAAGGGCATGGTCGCGAGCCTTGACCCGCATTCG
GCCTATCTGGACGAGAAAGACTTCAAGGAACTGCAGGAAGGCACGCGCGGCCGCTTCGCCGGCCTCGGCATCGAGATCTC
GCAGGAAGAAGGCCTGGTCAAGGTCATCAACCCGATCGAGGACACCCCCGCGTTCCGTGCCGGCATCCAGCCCGGCGACC
TGATTACCCGTATCGACGACAAGCCCGTGCGCGGGCTGCCGCTGGAACAGGCGGTCAAGCGCATGCGCGGCGAGCCCGGC
ACCAAGGTTACGCTGACGATCTATCGCAAAAGCGAAGAGCGCACCTTCCCGATTTCCATCACCCGTGCCGAAATCCGCGT
CCAGTCGGTCAAGACCAAGATGCTGGACAACAACACCATCGGCTGGGTGCGCCTGACCAGCTTCCAGGAACGCACGGTCG
GGGACCTGGGCCGCCGGCTCAACGAGATGGCCCAGAAGAACCCGGGCCTGAAGGGTATCGTCCTGGACCTGCGCAACAAC
GGCGGCGGCGTGCTGCAGGGCGCGGTCGGCGTAGCGGCGGCGTTCCTGCCGGACGATTCGACGGTGGTGTCCACCAACGG
CCAGGTGCCCGACGCCAAGCGCGTGTACAAGGCGACGTTCAACAACTACCGCCTGTCGTCGCTCGAGGACGATCCGCTCA
AGGACCTGCCGGCGCTGTACAAGAAAATCCCGATGGTCGTGCTGACCAACGCCTATTCGGCGTCGGCGTCCGAGATCGTG
GCTGGCGCGCTGCAGGACCACCACCGCGCGCTGATCATGGGCAAGACCACGTTCGGCAAGGGTTCGGTGCAGACCGTGCG
GCCGCTGACCAATGACACCGGCATCAAGCTGACCATCGCGTACTACTACACGCCGACGGGCAAGTCGATCCAGGCCAAGG
GTATCCGCCCGGACATTCCGGTCGACCAGAACCCGGAAGGTGACCCGGACGACGCGCTGATCACGCGCGAAATCGACACC
GAGCGCCACCTGCACAACAAGCAGGAATCGGAAGAGCCGGAAATGAACGAGCGTGAACAGCGCCGCGTGGAAGAACTGCG
CCGCCTGGAAGAAGAGAACGCGAAGAAGACGCCGGAAGAGCGCGAGAAGGAACGTCGCAAGAAGCCGATCGAATTCGGTT
CGGCCGACGACTTCATGTTGCAGCAGGCCATCGCCCAGCTCGACGGCCGGCCGGTCAAGCGCTCCAAGTCGAAGCTCGAA
ACCAACCCGCCCGCCGACAAGCCGGCCAAGGCCGCGCCTGCGAAGAAGGGCGCCAGCGCCCCGGCTGCCAAGCCCGCCGC
GCCGGCGCCCGGCAAGCAGCCGCCGGCCAGTGCGCCGATCGGCGAGCCGCTGGGCACGCCGACCGGCAAGGCGCCCTGA

Upstream 100 bases:

>100_bases
TCTCCACACCGTTTTATACTGTCGGACAAACCGCCCCGCGCCCGGCGCAGGGCGGCTGCAGCCGGCATAATCCCCCTACG
TACACGTTCAGGCAGCCCTC

Downstream 100 bases:

>100_bases
GCGGCACCCTGACCAGAAGCGGCCCTGCGGGGCCGCTTTTTACATTGCACGTCCTGTCCTGAGCCTCATGCCATGAACGA
CGATCAACTGCTGCGCTATT

Product: peptidase S41A, C-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MRKTLKNISLVSVGLVAGVLATLQISATAQNSAGPLPLDQLRLMADIFGQIKREYVEPVDDKKLLTEAIKGMVASLDPHS
AYLDEKDFKELQEGTRGRFAGLGIEISQEEGLVKVINPIEDTPAFRAGIQPGDLITRIDDKPVRGLPLEQAVKRMRGEPG
TKVTLTIYRKSEERTFPISITRAEIRVQSVKTKMLDNNTIGWVRLTSFQERTVGDLGRRLNEMAQKNPGLKGIVLDLRNN
GGGVLQGAVGVAAAFLPDDSTVVSTNGQVPDAKRVYKATFNNYRLSSLEDDPLKDLPALYKKIPMVVLTNAYSASASEIV
AGALQDHHRALIMGKTTFGKGSVQTVRPLTNDTGIKLTIAYYYTPTGKSIQAKGIRPDIPVDQNPEGDPDDALITREIDT
ERHLHNKQESEEPEMNEREQRRVEELRRLEEENAKKTPEEREKERRKKPIEFGSADDFMLQQAIAQLDGRPVKRSKSKLE
TNPPADKPAKAAPAKKGASAPAAKPAAPAPGKQPPASAPIGEPLGTPTGKAP

Sequences:

>Translated_532_residues
MRKTLKNISLVSVGLVAGVLATLQISATAQNSAGPLPLDQLRLMADIFGQIKREYVEPVDDKKLLTEAIKGMVASLDPHS
AYLDEKDFKELQEGTRGRFAGLGIEISQEEGLVKVINPIEDTPAFRAGIQPGDLITRIDDKPVRGLPLEQAVKRMRGEPG
TKVTLTIYRKSEERTFPISITRAEIRVQSVKTKMLDNNTIGWVRLTSFQERTVGDLGRRLNEMAQKNPGLKGIVLDLRNN
GGGVLQGAVGVAAAFLPDDSTVVSTNGQVPDAKRVYKATFNNYRLSSLEDDPLKDLPALYKKIPMVVLTNAYSASASEIV
AGALQDHHRALIMGKTTFGKGSVQTVRPLTNDTGIKLTIAYYYTPTGKSIQAKGIRPDIPVDQNPEGDPDDALITREIDT
ERHLHNKQESEEPEMNEREQRRVEELRRLEEENAKKTPEEREKERRKKPIEFGSADDFMLQQAIAQLDGRPVKRSKSKLE
TNPPADKPAKAAPAKKGASAPAAKPAAPAPGKQPPASAPIGEPLGTPTGKAP
>Mature_532_residues
MRKTLKNISLVSVGLVAGVLATLQISATAQNSAGPLPLDQLRLMADIFGQIKREYVEPVDDKKLLTEAIKGMVASLDPHS
AYLDEKDFKELQEGTRGRFAGLGIEISQEEGLVKVINPIEDTPAFRAGIQPGDLITRIDDKPVRGLPLEQAVKRMRGEPG
TKVTLTIYRKSEERTFPISITRAEIRVQSVKTKMLDNNTIGWVRLTSFQERTVGDLGRRLNEMAQKNPGLKGIVLDLRNN
GGGVLQGAVGVAAAFLPDDSTVVSTNGQVPDAKRVYKATFNNYRLSSLEDDPLKDLPALYKKIPMVVLTNAYSASASEIV
AGALQDHHRALIMGKTTFGKGSVQTVRPLTNDTGIKLTIAYYYTPTGKSIQAKGIRPDIPVDQNPEGDPDDALITREIDT
ERHLHNKQESEEPEMNEREQRRVEELRRLEEENAKKTPEEREKERRKKPIEFGSADDFMLQQAIAQLDGRPVKRSKSKLE
TNPPADKPAKAAPAKKGASAPAAKPAAPAPGKQPPASAPIGEPLGTPTGKAP

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=392, Percent_Identity=28.0612244897959, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 58125; Mature: 58125

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTLKNISLVSVGLVAGVLATLQISATAQNSAGPLPLDQLRLMADIFGQIKREYVEPVD
CCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
DKKLLTEAIKGMVASLDPHSAYLDEKDFKELQEGTRGRFAGLGIEISQEEGLVKVINPIE
HHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCEEECCEEECCCCCEEEECCCCC
DTPAFRAGIQPGDLITRIDDKPVRGLPLEQAVKRMRGEPGTKVTLTIYRKSEERTFPISI
CCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEE
TRAEIRVQSVKTKMLDNNTIGWVRLTSFQERTVGDLGRRLNEMAQKNPGLKGIVLDLRNN
EHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC
GGGVLQGAVGVAAAFLPDDSTVVSTNGQVPDAKRVYKATFNNYRLSSLEDDPLKDLPALY
CCCEEEHHHHHHEEECCCCCEEEECCCCCCCHHHHHHHHHCCEECCCCCCCCHHHHHHHH
KKIPMVVLTNAYSASASEIVAGALQDHHRALIMGKTTFGKGSVQTVRPLTNDTGIKLTIA
HHCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEEE
YYYTPTGKSIQAKGIRPDIPVDQNPEGDPDDALITREIDTERHLHNKQESEEPEMNEREQ
EEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCCCCHHHH
RRVEELRRLEEENAKKTPEEREKERRKKPIEFGSADDFMLQQAIAQLDGRPVKRSKSKLE
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCC
TNPPADKPAKAAPAKKGASAPAAKPAAPAPGKQPPASAPIGEPLGTPTGKAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKTLKNISLVSVGLVAGVLATLQISATAQNSAGPLPLDQLRLMADIFGQIKREYVEPVD
CCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
DKKLLTEAIKGMVASLDPHSAYLDEKDFKELQEGTRGRFAGLGIEISQEEGLVKVINPIE
HHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCEEECCEEECCCCCEEEECCCCC
DTPAFRAGIQPGDLITRIDDKPVRGLPLEQAVKRMRGEPGTKVTLTIYRKSEERTFPISI
CCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEE
TRAEIRVQSVKTKMLDNNTIGWVRLTSFQERTVGDLGRRLNEMAQKNPGLKGIVLDLRNN
EHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC
GGGVLQGAVGVAAAFLPDDSTVVSTNGQVPDAKRVYKATFNNYRLSSLEDDPLKDLPALY
CCCEEEHHHHHHEEECCCCCEEEECCCCCCCHHHHHHHHHCCEECCCCCCCCHHHHHHHH
KKIPMVVLTNAYSASASEIVAGALQDHHRALIMGKTTFGKGSVQTVRPLTNDTGIKLTIA
HHCCEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEEE
YYYTPTGKSIQAKGIRPDIPVDQNPEGDPDDALITREIDTERHLHNKQESEEPEMNEREQ
EEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCCCCHHHH
RRVEELRRLEEENAKKTPEEREKERRKKPIEFGSADDFMLQQAIAQLDGRPVKRSKSKLE
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCC
TNPPADKPAKAAPAKKGASAPAAKPAAPAPGKQPPASAPIGEPLGTPTGKAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]