Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is dctB [H]
Identifier: 73539982
GI number: 73539982
Start: 307486
End: 309465
Strand: Reverse
Name: dctB [H]
Synonym: Reut_A0276
Alternate gene names: 73539982
Gene position: 309465-307486 (Counterclockwise)
Preceding gene: 73539983
Following gene: 73539981
Centisome position: 8.13
GC content: 68.54
Gene sequence:
>1980_bases ATGCCCCATTCCGACGACTTCCTCGCCGTACATGACCCCGCCGCCGCCCAGGCGGCGCACGAGCCCGGCAGCGAGAACCG CCGCTGGTGGGGCTTTGCCGTGGCACTGGCGGCCGGCCTCGTGCTGCTATGCGCGCTGACGTGGCTGGTATCCGTGCAGC GCGGCCTGGCAACACTGCAGGAAAGCACCGCTACACGCGCCGACCGCTACGCCGCCACGCTCGAAAGCACGCTCGACCGC TACGAATTCCTGCCCGCGCTGGTATCGCTGCACCCGTTCGTGCGTGGCCTGCTGCAGGCGCCCGATGATCCCGCACGCGT CGCTGCGGCCAACCATTATCTTGCTGAAGTCAACCGCCGCTCGCATGCGTCGGCCACCTACGTGATCGCCACCAACGGCA TCGCGCTGGCCGCCAGCAACGCCGGCGAGCCCGGCAGCTTCGTCGGCACCGACTACCGCTTCCGCCCCTACTTCCAGATC GCATCGCGCGGAGAGATGGGGCGCTTCTATGCGATCGGCATCACCAGCGACGAGCCGGGCTACTACATCGCGCAGCCCGT GGAGTCGGGCGGCAAGGTGATCGGCGTGACGGTAGTCAAGCTCAACCTGGAGTGGTTCCAGCGTGCCGGCGGCGGCAGCG CCGAGCCGCTGATGGTCAGCGACGACCACGGCGTGATCTTCCTGTCGTCCGTGCCTGCCTGGCAGTACCGCACGCTGGGG CCGTTGCCGGCCGAGCTGCACGACGAGCTGGGCAAGACCCGTCAGTATCACGACCGTGATGTCACGCCGCTTCCGCTCGA ACCGCTAACCTCGCCGGTCACCGAGTGGCTGGCCTCCAGGGCGCTCGACCCGGGCGCGCGCCTGGTGCGTGTGCGCGCCG ACGGCCCCAACCCCGACGGCAGCGAGCGCGCGGACCGCTACCTCGAACTCGGCCGCAAGGTGGGCCCCGCGGAGTGGACC ATGCAGGTGATGGCACCGCTCGACCCGGTGCTGGCCAATGCGCGCAATGCCACCGTGGCAGCGGCGCTGGCCTACGCGTG CATTTGCCTGCTGCTGGTCAATTGGCGTCAGCGCCGCCAGCGCGCACGCGACATGCTGTACAGCCGCCGCCTGCTCGAAG CCGCCTATGACGAGCTTGAGCGGCGTGTCGAAGCCCGCACGGCCGACCTGATGGCCATCAACGAAAAGCTCGAAGAAGAA GTCGCCGAACGCACACGCGCGGAGAGCGAGTTGCGCGCGGCACAGGACGAACTCGTGCAGGCCAGCAAACTCGCTGCGCT GGGTCAGATGGCCGCCGGCATCACGCATGAGCTGAACCAGCCGCTGGCCGCGTTGCGCACGTTCTCCGACAACACGCGCG TGTTGCTGGAGCGTGGGCAACTCGCCGCTGCGGAAGGCAACCTGTCCGCGATTGCCGACCTCACCGAGCGCATGGGCAAG ATCACCGGCCAGCTCAAGCTGTTTGCCGGCAAGGCGCGCCCGCCGCGCCGTTCGGTGCTGGTCAGCGCCGCGATCGAGCA CGTGCTGGCCCTGCTGGCGCCGCGGCTGACCGGCGTGACACTGCATGTTGATGGACTCCACGCACTGCCCAACATTGCCG TGCGCGCCGACGAACTCAAGCTTGAGCAAGTGCTGCTCAACCTGATCGGCAATGCGCTCGATGCCATCGCCAGCGCGGCG CCTGCGCAAGGGCGCATCGACGTTTCCGTCAGCGCCGACGCAAGCGCGGTGACGATCCAGGTGCGCGACAATGGCACGGG TATCTCGCCGGAAGACCTGCCGCGCCTGTTCGAGCCGTTCTTCACGACCAAGGAAACCGGCCAGGGGCTGGGCCTCGGCC TGGCGATCTCCTCGTCGATCGTGCGCGAGTTCGGCGGACAACTCAGCGCCGCCAATGCTGACGGCGGCGGCGCGGTATTC ACCATCGTGCTGACGCGCGCACCGGTCGACGCCGGCGCAGGCGTCACCCAGACACATTGA
Upstream 100 bases:
>100_bases GCCGGCCAGAACGTCTGACGCCTCGCAGGCAAGCGGCCGGCCCGGTGGGCCGGCCGCGCCGCAGCGAGTATCATCGGCGC GACAGCCTTCGCGCGCGCCG
Downstream 100 bases:
>100_bases GGCATCCCATGCAAGACGGTTTGCGCGTCCTCTTCGTCGAAGATGAACCGCTGGTGCGCCAGGCCACCGCGCAAAGCCTG GAGCTGGCCGGCTTTTCCGT
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 659; Mature: 658
Protein sequence:
>659_residues MPHSDDFLAVHDPAAAQAAHEPGSENRRWWGFAVALAAGLVLLCALTWLVSVQRGLATLQESTATRADRYAATLESTLDR YEFLPALVSLHPFVRGLLQAPDDPARVAAANHYLAEVNRRSHASATYVIATNGIALAASNAGEPGSFVGTDYRFRPYFQI ASRGEMGRFYAIGITSDEPGYYIAQPVESGGKVIGVTVVKLNLEWFQRAGGGSAEPLMVSDDHGVIFLSSVPAWQYRTLG PLPAELHDELGKTRQYHDRDVTPLPLEPLTSPVTEWLASRALDPGARLVRVRADGPNPDGSERADRYLELGRKVGPAEWT MQVMAPLDPVLANARNATVAAALAYACICLLLVNWRQRRQRARDMLYSRRLLEAAYDELERRVEARTADLMAINEKLEEE VAERTRAESELRAAQDELVQASKLAALGQMAAGITHELNQPLAALRTFSDNTRVLLERGQLAAAEGNLSAIADLTERMGK ITGQLKLFAGKARPPRRSVLVSAAIEHVLALLAPRLTGVTLHVDGLHALPNIAVRADELKLEQVLLNLIGNALDAIASAA PAQGRIDVSVSADASAVTIQVRDNGTGISPEDLPRLFEPFFTTKETGQGLGLGLAISSSIVREFGGQLSAANADGGGAVF TIVLTRAPVDAGAGVTQTH
Sequences:
>Translated_659_residues MPHSDDFLAVHDPAAAQAAHEPGSENRRWWGFAVALAAGLVLLCALTWLVSVQRGLATLQESTATRADRYAATLESTLDR YEFLPALVSLHPFVRGLLQAPDDPARVAAANHYLAEVNRRSHASATYVIATNGIALAASNAGEPGSFVGTDYRFRPYFQI ASRGEMGRFYAIGITSDEPGYYIAQPVESGGKVIGVTVVKLNLEWFQRAGGGSAEPLMVSDDHGVIFLSSVPAWQYRTLG PLPAELHDELGKTRQYHDRDVTPLPLEPLTSPVTEWLASRALDPGARLVRVRADGPNPDGSERADRYLELGRKVGPAEWT MQVMAPLDPVLANARNATVAAALAYACICLLLVNWRQRRQRARDMLYSRRLLEAAYDELERRVEARTADLMAINEKLEEE VAERTRAESELRAAQDELVQASKLAALGQMAAGITHELNQPLAALRTFSDNTRVLLERGQLAAAEGNLSAIADLTERMGK ITGQLKLFAGKARPPRRSVLVSAAIEHVLALLAPRLTGVTLHVDGLHALPNIAVRADELKLEQVLLNLIGNALDAIASAA PAQGRIDVSVSADASAVTIQVRDNGTGISPEDLPRLFEPFFTTKETGQGLGLGLAISSSIVREFGGQLSAANADGGGAVF TIVLTRAPVDAGAGVTQTH >Mature_658_residues PHSDDFLAVHDPAAAQAAHEPGSENRRWWGFAVALAAGLVLLCALTWLVSVQRGLATLQESTATRADRYAATLESTLDRY EFLPALVSLHPFVRGLLQAPDDPARVAAANHYLAEVNRRSHASATYVIATNGIALAASNAGEPGSFVGTDYRFRPYFQIA SRGEMGRFYAIGITSDEPGYYIAQPVESGGKVIGVTVVKLNLEWFQRAGGGSAEPLMVSDDHGVIFLSSVPAWQYRTLGP LPAELHDELGKTRQYHDRDVTPLPLEPLTSPVTEWLASRALDPGARLVRVRADGPNPDGSERADRYLELGRKVGPAEWTM QVMAPLDPVLANARNATVAAALAYACICLLLVNWRQRRQRARDMLYSRRLLEAAYDELERRVEARTADLMAINEKLEEEV AERTRAESELRAAQDELVQASKLAALGQMAAGITHELNQPLAALRTFSDNTRVLLERGQLAAAEGNLSAIADLTERMGKI TGQLKLFAGKARPPRRSVLVSAAIEHVLALLAPRLTGVTLHVDGLHALPNIAVRADELKLEQVLLNLIGNALDAIASAAP AQGRIDVSVSADASAVTIQVRDNGTGISPEDLPRLFEPFFTTKETGQGLGLGLAISSSIVREFGGQLSAANADGGGAVFT IVLTRAPVDAGAGVTQTH
Specific function: Member of the two-component regulatory system dctB/dctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates dctD in response to environmental signals [H]
COG id: COG4191
COG function: function code T; Signal transduction histidine kinase regulating C4-dicarboxylate transport system
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=233, Percent_Identity=33.0472103004292, Blast_Score=112, Evalue=7e-26, Organism=Escherichia coli, GI1788549, Length=240, Percent_Identity=32.9166666666667, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI145693157, Length=259, Percent_Identity=29.3436293436293, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1789149, Length=289, Percent_Identity=27.3356401384083, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1790861, Length=225, Percent_Identity=30.2222222222222, Blast_Score=73, Evalue=7e-14, Organism=Escherichia coli, GI48994928, Length=255, Percent_Identity=27.0588235294118, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI87081816, Length=284, Percent_Identity=28.169014084507, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1787894, Length=235, Percent_Identity=28.936170212766, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1790346, Length=274, Percent_Identity=28.1021897810219, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1789808, Length=260, Percent_Identity=25.7692307692308, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1786600, Length=225, Percent_Identity=26.2222222222222, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1786783, Length=232, Percent_Identity=31.4655172413793, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR017055 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 70853; Mature: 70722
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHSDDFLAVHDPAAAQAAHEPGSENRRWWGFAVALAAGLVLLCALTWLVSVQRGLATLQ CCCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESTATRADRYAATLESTLDRYEFLPALVSLHPFVRGLLQAPDDPARVAAANHYLAEVNRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC SHASATYVIATNGIALAASNAGEPGSFVGTDYRFRPYFQIASRGEMGRFYAIGITSDEPG CCCCEEEEEEECCEEEEECCCCCCCCCCCCCCEECHHHHHHCCCCCCEEEEEEECCCCCC YYIAQPVESGGKVIGVTVVKLNLEWFQRAGGGSAEPLMVSDDHGVIFLSSVPAWQYRTLG EEEECCCCCCCCEEEEEEEEEEHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCC PLPAELHDELGKTRQYHDRDVTPLPLEPLTSPVTEWLASRALDPGARLVRVRADGPNPDG CCCHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC SERADRYLELGRKVGPAEWTMQVMAPLDPVLANARNATVAAALAYACICLLLVNWRQRRQ HHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RARDMLYSRRLLEAAYDELERRVEARTADLMAINEKLEEEVAERTRAESELRAAQDELVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASKLAALGQMAAGITHELNQPLAALRTFSDNTRVLLERGQLAAAEGNLSAIADLTERMGK HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHH ITGQLKLFAGKARPPRRSVLVSAAIEHVLALLAPRLTGVTLHVDGLHALPNIAVRADELK HHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCEEEHHHHH LEQVLLNLIGNALDAIASAAPAQGRIDVSVSADASAVTIQVRDNGTGISPEDLPRLFEPF HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHH FTTKETGQGLGLGLAISSSIVREFGGQLSAANADGGGAVFTIVLTRAPVDAGAGVTQTH HCCCCCCCCCEEHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure PHSDDFLAVHDPAAAQAAHEPGSENRRWWGFAVALAAGLVLLCALTWLVSVQRGLATLQ CCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESTATRADRYAATLESTLDRYEFLPALVSLHPFVRGLLQAPDDPARVAAANHYLAEVNRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC SHASATYVIATNGIALAASNAGEPGSFVGTDYRFRPYFQIASRGEMGRFYAIGITSDEPG CCCCEEEEEEECCEEEEECCCCCCCCCCCCCCEECHHHHHHCCCCCCEEEEEEECCCCCC YYIAQPVESGGKVIGVTVVKLNLEWFQRAGGGSAEPLMVSDDHGVIFLSSVPAWQYRTLG EEEECCCCCCCCEEEEEEEEEEHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCC PLPAELHDELGKTRQYHDRDVTPLPLEPLTSPVTEWLASRALDPGARLVRVRADGPNPDG CCCHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC SERADRYLELGRKVGPAEWTMQVMAPLDPVLANARNATVAAALAYACICLLLVNWRQRRQ HHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RARDMLYSRRLLEAAYDELERRVEARTADLMAINEKLEEEVAERTRAESELRAAQDELVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASKLAALGQMAAGITHELNQPLAALRTFSDNTRVLLERGQLAAAEGNLSAIADLTERMGK HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHH ITGQLKLFAGKARPPRRSVLVSAAIEHVLALLAPRLTGVTLHVDGLHALPNIAVRADELK HHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCEEEHHHHH LEQVLLNLIGNALDAIASAAPAQGRIDVSVSADASAVTIQVRDNGTGISPEDLPRLFEPF HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHH FTTKETGQGLGLGLAISSSIVREFGGQLSAANADGGGAVFTIVLTRAPVDAGAGVTQTH HCCCCCCCCCEEHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3671068 [H]