Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is mhpD [H]
Identifier: 73539978
GI number: 73539978
Start: 302875
End: 303663
Strand: Direct
Name: mhpD [H]
Synonym: Reut_A0272
Alternate gene names: 73539978
Gene position: 302875-303663 (Clockwise)
Preceding gene: 73539977
Following gene: 73539979
Centisome position: 7.96
GC content: 67.55
Gene sequence:
>789_bases ATGACTGAACCAAATTTCGTCAACGCCATCGCAGCACGCCTGCGCGATGCCGAGGCCACGCGCCAGACCGTCGCGCCGGT GCGTGGCGAGATCGCGATCGATGACATCGCCACCGCGTATGCCGTGCAGCAGGCCAACGTCGACGCGCGCCTCGCACAAG GCGAACGCATCGTCGGCCGCAAGATCGGCCTGACTTCGCTGGCCGTGCAGAAGCAGCTCGGCGTCGACCAGCCCGACTTC GGCGCGCTGTTCGCGAGCATGGCGTATGGCGACAGCCAGCCGATGCCGCTGTCGCGCCTGATCCAGCCGAAGGTCGAAGC CGAGATCGCACTGGTGCTCGAGCACGACCTGACGCACGAGCGTCATACGTTTGCCGACATCCTGCGCGCGAGCGCCTACG CGCTGGCGGCAATCGAGGTCGTCGACAGCCGCATCCAGAACTGGGACATCCGCTTTGTCGATACCGTCGCCGACAACGCG TCGAGCGCGCTGTTCGTGCTCGGTAGCCGTCCGGTGCCGCTGTCCGCCGTCGATCTCGCTGCATGCGCGATGACGCTGTC GCGCGACGGAGAAGTGCTGTCGCGCGGCAACGGTGCGGCCTGCCTCGGCAACCCGCTCAATGCGGCGGTCTGGCTTGCGG ATCGCATGGTGCAGCTCGGCACGCCGCTGCGTGCTGGAGACGTGGTGCTGACCGGTGCGCTCGGCCCGATGGTCGCCGTG ACCGAGCCCGGCACCTACACCACCGAAATCGAAGGACTCGGCAGCGTCCGCGCGACGTTCGCCGCATAA
Upstream 100 bases:
>100_bases CATCGCTCGATTTCTACCGCGCGATTCCTGAGTGGATCGCGGGCTTCGCCACCATGCATGCCGAGCCTGCAGCGGTCTGA CCCGATCAAGGAGAACCCCG
Downstream 100 bases:
>100_bases GCCGTCACCAAGAGCGGCACACACAGACAAAAGCGGAGACAAGAATGCAACCATCAAACAGCAGCGGCGCTAACGGGCGC AGCACAACAAGCAGCATCAC
Product: 4-oxalocrotonate decarboxylase
Products: NA
Alternate protein names: 2-hydroxypentadienoic acid hydratase [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTEPNFVNAIAARLRDAEATRQTVAPVRGEIAIDDIATAYAVQQANVDARLAQGERIVGRKIGLTSLAVQKQLGVDQPDF GALFASMAYGDSQPMPLSRLIQPKVEAEIALVLEHDLTHERHTFADILRASAYALAAIEVVDSRIQNWDIRFVDTVADNA SSALFVLGSRPVPLSAVDLAACAMTLSRDGEVLSRGNGAACLGNPLNAAVWLADRMVQLGTPLRAGDVVLTGALGPMVAV TEPGTYTTEIEGLGSVRATFAA
Sequences:
>Translated_262_residues MTEPNFVNAIAARLRDAEATRQTVAPVRGEIAIDDIATAYAVQQANVDARLAQGERIVGRKIGLTSLAVQKQLGVDQPDF GALFASMAYGDSQPMPLSRLIQPKVEAEIALVLEHDLTHERHTFADILRASAYALAAIEVVDSRIQNWDIRFVDTVADNA SSALFVLGSRPVPLSAVDLAACAMTLSRDGEVLSRGNGAACLGNPLNAAVWLADRMVQLGTPLRAGDVVLTGALGPMVAV TEPGTYTTEIEGLGSVRATFAA >Mature_261_residues TEPNFVNAIAARLRDAEATRQTVAPVRGEIAIDDIATAYAVQQANVDARLAQGERIVGRKIGLTSLAVQKQLGVDQPDFG ALFASMAYGDSQPMPLSRLIQPKVEAEIALVLEHDLTHERHTFADILRASAYALAAIEVVDSRIQNWDIRFVDTVADNAS SALFVLGSRPVPLSAVDLAACAMTLSRDGEVLSRGNGAACLGNPLNAAVWLADRMVQLGTPLRAGDVVLTGALGPMVAVT EPGTYTTEIEGLGSVRATFAA
Specific function: Catalyzes the conversion of 2-hydroxypentadienoic acid (enolic form of 2-oxopent-4-enoate) to 4-hydroxy-2-ketopentanoic acid [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family. MhpD subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=253, Percent_Identity=54.1501976284585, Blast_Score=278, Evalue=2e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =4.2.1.80 [H]
Molecular weight: Translated: 27692; Mature: 27561
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPNFVNAIAARLRDAEATRQTVAPVRGEIAIDDIATAYAVQQANVDARLAQGERIVGR CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCHHHHCCCEEHHH KIGLTSLAVQKQLGVDQPDFGALFASMAYGDSQPMPLSRLIQPKVEAEIALVLEHDLTHE HCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCH RHTFADILRASAYALAAIEVVDSRIQNWDIRFVDTVADNASSALFVLGSRPVPLSAVDLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHH ACAMTLSRDGEVLSRGNGAACLGNPLNAAVWLADRMVQLGTPLRAGDVVLTGALGPMVAV HHHHHHCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEE TEPGTYTTEIEGLGSVRATFAA ECCCCEEEEECCCCCCEEEECC >Mature Secondary Structure TEPNFVNAIAARLRDAEATRQTVAPVRGEIAIDDIATAYAVQQANVDARLAQGERIVGR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCHHHHCCCEEHHH KIGLTSLAVQKQLGVDQPDFGALFASMAYGDSQPMPLSRLIQPKVEAEIALVLEHDLTHE HCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCH RHTFADILRASAYALAAIEVVDSRIQNWDIRFVDTVADNASSALFVLGSRPVPLSAVDLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHH ACAMTLSRDGEVLSRGNGAACLGNPLNAAVWLADRMVQLGTPLRAGDVVLTGALGPMVAV HHHHHHCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEE TEPGTYTTEIEGLGSVRATFAA ECCCCEEEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA