Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is mhpR [H]
Identifier: 73539975
GI number: 73539975
Start: 299000
End: 299782
Strand: Reverse
Name: mhpR [H]
Synonym: Reut_A0269
Alternate gene names: 73539975
Gene position: 299782-299000 (Counterclockwise)
Preceding gene: 73539981
Following gene: 73539974
Centisome position: 7.88
GC content: 65.52
Gene sequence:
>783_bases ATGACCAAGTACGCCAACGTGCGGGGGTTGTCACGCGGCCTGCAGGTGCTGCGGGCGCTCAATGCCATGGAAAACGGCCG TGCCACCAGCCAGCAGCTCAGCGAGGCCACGGGCCTGCACCGGACCACCGTGCGGCGTTTGCTGGAAACACTGGTCGAAG AAGGCTTCGTGCGGCGCAGTACATCGGACGACAGCTTCCGCCTGACACTCGACGTGCGCGCGCTCAGCGAAGGCTTCACC GACGACGAACGCATCGCCACCATCGCGCCGCCGATCATGGGGCGGCTGCTGCAGCGCGTAGTGTGGCCGTCCGACCTGAC CACGCCCGACGGCGACGCCATGATCATCCGCGAAACCACGCACCGCTTCAGCCCGCTGTCGTTTCACCGCTCCATGGTCG GCAGGCGGCTGCCGATCCTGCTGACCTCCGCGGGCCGCGTGTATTTCTCGATGTGCCCGGATGCCGAACGCGAAGACATT CTCGAAGTGCTGCGCTCAGGCGCGGGCGGCGAACAGCAGCTCAAGCTGGCGATGGACGACGCGTATATCCGCAACCTGAT CCGGCAGACCCGCAAGGATGGATTCGGGTCGAATCATGGTGACTGGGCGGATCAGAAGAAGATCGGGGCGGTGGCCGTAG CGATCCAGGCGGAGGGGCGGGTGCTGGCGAGCCTGAATGTCGTTTATCTGGAGCAAGCGATCAGTCCGGCAGAGGCGACG CGGCGGTTTGTGCCGGAGTTGCAGCAGGCGGCGAAGGAGATGGTAGCTGCGTTGAGCGCGTAG
Upstream 100 bases:
>100_bases TTTGCGATTTTCAGAGGAGTCTAGGCATCCGCCAGCGCGCGCTCAAACATTTCTATAAAATGTGCAAGGAGTGCACATCT TTGATTTTTAAGGATTTTCG
Downstream 100 bases:
>100_bases TCGCGGCGTAAGCCGCCCCGCGGTTGCGCACCGCCCCGACGATTCCCCGATTTGGCGTAGATTGACGCTTCTAGCCCCTG CAATCGGAAAATCCCTATAA
Product: DNA-binding transcriptional activator MhpR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MTKYANVRGLSRGLQVLRALNAMENGRATSQQLSEATGLHRTTVRRLLETLVEEGFVRRSTSDDSFRLTLDVRALSEGFT DDERIATIAPPIMGRLLQRVVWPSDLTTPDGDAMIIRETTHRFSPLSFHRSMVGRRLPILLTSAGRVYFSMCPDAEREDI LEVLRSGAGGEQQLKLAMDDAYIRNLIRQTRKDGFGSNHGDWADQKKIGAVAVAIQAEGRVLASLNVVYLEQAISPAEAT RRFVPELQQAAKEMVAALSA
Sequences:
>Translated_260_residues MTKYANVRGLSRGLQVLRALNAMENGRATSQQLSEATGLHRTTVRRLLETLVEEGFVRRSTSDDSFRLTLDVRALSEGFT DDERIATIAPPIMGRLLQRVVWPSDLTTPDGDAMIIRETTHRFSPLSFHRSMVGRRLPILLTSAGRVYFSMCPDAEREDI LEVLRSGAGGEQQLKLAMDDAYIRNLIRQTRKDGFGSNHGDWADQKKIGAVAVAIQAEGRVLASLNVVYLEQAISPAEAT RRFVPELQQAAKEMVAALSA >Mature_259_residues TKYANVRGLSRGLQVLRALNAMENGRATSQQLSEATGLHRTTVRRLLETLVEEGFVRRSTSDDSFRLTLDVRALSEGFTD DERIATIAPPIMGRLLQRVVWPSDLTTPDGDAMIIRETTHRFSPLSFHRSMVGRRLPILLTSAGRVYFSMCPDAEREDIL EVLRSGAGGEQQLKLAMDDAYIRNLIRQTRKDGFGSNHGDWADQKKIGAVAVAIQAEGRVLASLNVVYLEQAISPAEATR RFVPELQQAAKEMVAALSA
Specific function: Activator of the mhpRABCDEF operon coding for components of the 3-hydroxyphenylpropionate degradation pathway [H]
COG id: COG1414
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]
Homologues:
Organism=Escherichia coli, GI145693096, Length=253, Percent_Identity=49.802371541502, Blast_Score=251, Evalue=4e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014757 - InterPro: IPR005471 - InterPro: IPR011991 [H]
Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]
EC number: NA
Molecular weight: Translated: 28809; Mature: 28678
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYANVRGLSRGLQVLRALNAMENGRATSQQLSEATGLHRTTVRRLLETLVEEGFVRRS CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHCCC TSDDSFRLTLDVRALSEGFTDDERIATIAPPIMGRLLQRVVWPSDLTTPDGDAMIIRETT CCCCCEEEEEEHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCC HRFSPLSFHRSMVGRRLPILLTSAGRVYFSMCPDAEREDILEVLRSGAGGEQQLKLAMDD CCCCHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHH AYIRNLIRQTRKDGFGSNHGDWADQKKIGAVAVAIQAEGRVLASLNVVYLEQAISPAEAT HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCEEEEEECCCEEEHHHHHHHHHHHCCHHHHH RRFVPELQQAAKEMVAALSA HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKYANVRGLSRGLQVLRALNAMENGRATSQQLSEATGLHRTTVRRLLETLVEEGFVRRS CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHCCC TSDDSFRLTLDVRALSEGFTDDERIATIAPPIMGRLLQRVVWPSDLTTPDGDAMIIRETT CCCCCEEEEEEHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCC HRFSPLSFHRSMVGRRLPILLTSAGRVYFSMCPDAEREDILEVLRSGAGGEQQLKLAMDD CCCCHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHH AYIRNLIRQTRKDGFGSNHGDWADQKKIGAVAVAIQAEGRVLASLNVVYLEQAISPAEAT HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCEEEEEECCCEEEHHHHHHHHHHHCCHHHHH RRFVPELQQAAKEMVAALSA HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]