Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
---|---|
Accession | NC_007347 |
Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is 73539902
Identifier: 73539902
GI number: 73539902
Start: 220633
End: 221922
Strand: Direct
Name: 73539902
Synonym: Reut_A0196
Alternate gene names: NA
Gene position: 220633-221922 (Clockwise)
Preceding gene: 73539901
Following gene: 73539907
Centisome position: 5.8
GC content: 66.67
Gene sequence:
>1290_bases GTGGCGGGCAAAGAGCGACAGGAATCCCAGGAAACGGCGGCGCGGCGCGCAAAGCCAGTGCGCAAGCGCAAGGCGACTTC GGTAGACCCATGCGGGCCGGCGGAAGACCTGCCCAAGGGTCCTGAACCCGGTCGGCCGGCACATGAGGCCTATGCCGTGC GCGCGCTGGTGCTGCAGGGCGGCGGCGCGCTCGGCGCCTATCAGGCGGGCGTCTACCAGGGGCTCGCCGAAGGCGGCATC TATCCGAACTGGGTCGCGGGCATCTCGATCGGCGCACTGAATGCGGCGATCATTGCCGGCAATCCGCCCGAGCGGCGCGT CGAGCAGCTACGCGCGTTCTGGGACTACATCTGCGCGCAGCCGTGGCTGCCGAGCCTGTCGCAGTCGTCGATGTTCGACA GCGCGGATACCTGGCCGGAGCCGTTGCGCGTCTGGTTCGACGGCATGCACGCGGCGCGCGCGATGTTCGAAGGCCAGCGC GGCTTCTTCATGCCGCGCAACTGGCTGGAACTGGTGACGCGCTACACCGACCCTACGCGAGCGAGCTACTACGACACCAC GCCGCTCAAGGCCACGCTCGAACGCTTCGCCGACTTCGACCTGATCAACCGGCCCAAGGAAATGCGCGTGTCGGTCGGCG CGGTCAATATCCGCACTGGCAACTTCGCCTATTTCGACAACACGCGCGACACGCTGCGGCCCGAGCATTTCATGGCGTCG GGCGCGTTGCCGCCGGGCTTCCCGGCCGTGGAGATCGATGGCGAGTACTACTGGGACGGCGGCCTGGTGTCCAACACGCC GCTGGCCGAGGTGCTTACCGCGCAGCCGCGCCGCGACGCATTGATCTTTCAGGTCGACCTGTGGAGCGCGCGCGGCAAGC TGCCGCATGACTTGAGCGAGGTAGCCGAGCGCCAGAAGGATATCCAGTATTCCAGCCGCACCCGCACCATCACCGACTAC ATGCGCGAGCAGCAGAACTACCGCCGCATGCTCAGCGAAGTGATGGCGCTGGTGCCAGCGTCAAAGCGCGACAGCGACTG GTACCGCCGCGCCGCCGAGCATGCCTGCGATGCGCGCCGCAACGTGATTCAGCTTATCTACCGCGACAAGTCGTTCGAGA ACAGCGCAAAGGACTACCAGTTTGGGCTCCTGGCCATGAACGAACACTGGTCCAGCGGTCTGGACGATATCCGCGACACG CTGCGCCACCCGCACTGGCTGGCCATGCCGAGCCCCGAACGCCCGTTCGTCACGCACGACGTGCATCGCGGCAACGGCGA CCGCGAGTAA
Upstream 100 bases:
>100_bases GCTACGGCGTCTGACCGGCACTGTGGCGCGCGGCTGACCGGAGGTAGCTGCCGGCGTGCCGCGCCCAAGGCAGGATTCAC CATCTGTGAAGGAGCAAGGC
Downstream 100 bases:
>100_bases TGCGGCGCTCGAGTCATGCGGCGCGCTACTCGACCTTGATCCCCGCCAGGTCGGCCCGCGCCGGCGGGTAGGCCGGCTTG AGCTGGCGGAATACCTCGGC
Product: patatin
Products: NA
Alternate protein names: Patatin-Like Phospholipase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Transmembrane Protein; Esterase; Serine Protease; Alpha-Beta Hydrolase Family Esterase; Phospholipase Patatin Family; Transmembrane Patatin-Like Phospholipase; Patatin-Like Phospholipase Domain-Containing Protein; FabD/Lysophospholipase-Like Esterase; Alpha/Beta Hydrolase; Patatin-Like Phospholipase Family; Esterase Of Alpha-Beta Hydrolase Superfamily; Patatin Family Phospholipase; Dehydrogenase/Reductase; Phospholipase Patatin Family Protein; Transpatatin- Like Phospholipase Domain-Containing Protein
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MAGKERQESQETAARRAKPVRKRKATSVDPCGPAEDLPKGPEPGRPAHEAYAVRALVLQGGGALGAYQAGVYQGLAEGGI YPNWVAGISIGALNAAIIAGNPPERRVEQLRAFWDYICAQPWLPSLSQSSMFDSADTWPEPLRVWFDGMHAARAMFEGQR GFFMPRNWLELVTRYTDPTRASYYDTTPLKATLERFADFDLINRPKEMRVSVGAVNIRTGNFAYFDNTRDTLRPEHFMAS GALPPGFPAVEIDGEYYWDGGLVSNTPLAEVLTAQPRRDALIFQVDLWSARGKLPHDLSEVAERQKDIQYSSRTRTITDY MREQQNYRRMLSEVMALVPASKRDSDWYRRAAEHACDARRNVIQLIYRDKSFENSAKDYQFGLLAMNEHWSSGLDDIRDT LRHPHWLAMPSPERPFVTHDVHRGNGDRE
Sequences:
>Translated_429_residues MAGKERQESQETAARRAKPVRKRKATSVDPCGPAEDLPKGPEPGRPAHEAYAVRALVLQGGGALGAYQAGVYQGLAEGGI YPNWVAGISIGALNAAIIAGNPPERRVEQLRAFWDYICAQPWLPSLSQSSMFDSADTWPEPLRVWFDGMHAARAMFEGQR GFFMPRNWLELVTRYTDPTRASYYDTTPLKATLERFADFDLINRPKEMRVSVGAVNIRTGNFAYFDNTRDTLRPEHFMAS GALPPGFPAVEIDGEYYWDGGLVSNTPLAEVLTAQPRRDALIFQVDLWSARGKLPHDLSEVAERQKDIQYSSRTRTITDY MREQQNYRRMLSEVMALVPASKRDSDWYRRAAEHACDARRNVIQLIYRDKSFENSAKDYQFGLLAMNEHWSSGLDDIRDT LRHPHWLAMPSPERPFVTHDVHRGNGDRE >Mature_428_residues AGKERQESQETAARRAKPVRKRKATSVDPCGPAEDLPKGPEPGRPAHEAYAVRALVLQGGGALGAYQAGVYQGLAEGGIY PNWVAGISIGALNAAIIAGNPPERRVEQLRAFWDYICAQPWLPSLSQSSMFDSADTWPEPLRVWFDGMHAARAMFEGQRG FFMPRNWLELVTRYTDPTRASYYDTTPLKATLERFADFDLINRPKEMRVSVGAVNIRTGNFAYFDNTRDTLRPEHFMASG ALPPGFPAVEIDGEYYWDGGLVSNTPLAEVLTAQPRRDALIFQVDLWSARGKLPHDLSEVAERQKDIQYSSRTRTITDYM REQQNYRRMLSEVMALVPASKRDSDWYRRAAEHACDARRNVIQLIYRDKSFENSAKDYQFGLLAMNEHWSSGLDDIRDTL RHPHWLAMPSPERPFVTHDVHRGNGDRE
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48624; Mature: 48493
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKERQESQETAARRAKPVRKRKATSVDPCGPAEDLPKGPEPGRPAHEAYAVRALVLQG CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHEEEC GGALGAYQAGVYQGLAEGGIYPNWVAGISIGALNAAIIAGNPPERRVEQLRAFWDYICAQ CCCCHHHHHHHHHHHHHCCCCCCHHHHEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCC PWLPSLSQSSMFDSADTWPEPLRVWFDGMHAARAMFEGQRGFFMPRNWLELVTRYTDPTR CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCC ASYYDTTPLKATLERFADFDLINRPKEMRVSVGAVNIRTGNFAYFDNTRDTLRPEHFMAS CCCCCCCHHHHHHHHHHCCHHHCCCHHHEEEEEEEEEECCCEEEECCCHHHCCCHHHHHC GALPPGFPAVEIDGEYYWDGGLVSNTPLAEVLTAQPRRDALIFQVDLWSARGKLPHDLSE CCCCCCCCEEEECCEEEECCCCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHH VAERQKDIQYSSRTRTITDYMREQQNYRRMLSEVMALVPASKRDSDWYRRAAEHACDARR HHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH NVIQLIYRDKSFENSAKDYQFGLLAMNEHWSSGLDDIRDTLRHPHWLAMPSPERPFVTHD HHHHHHHHCCCCCCCCCCCEEEEEEECCHHCCCHHHHHHHHCCCEEEECCCCCCCCEECC VHRGNGDRE CCCCCCCCC >Mature Secondary Structure AGKERQESQETAARRAKPVRKRKATSVDPCGPAEDLPKGPEPGRPAHEAYAVRALVLQG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHEEEC GGALGAYQAGVYQGLAEGGIYPNWVAGISIGALNAAIIAGNPPERRVEQLRAFWDYICAQ CCCCHHHHHHHHHHHHHCCCCCCHHHHEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCC PWLPSLSQSSMFDSADTWPEPLRVWFDGMHAARAMFEGQRGFFMPRNWLELVTRYTDPTR CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCC ASYYDTTPLKATLERFADFDLINRPKEMRVSVGAVNIRTGNFAYFDNTRDTLRPEHFMAS CCCCCCCHHHHHHHHHHCCHHHCCCHHHEEEEEEEEEECCCEEEECCCHHHCCCHHHHHC GALPPGFPAVEIDGEYYWDGGLVSNTPLAEVLTAQPRRDALIFQVDLWSARGKLPHDLSE CCCCCCCCEEEECCEEEECCCCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHH VAERQKDIQYSSRTRTITDYMREQQNYRRMLSEVMALVPASKRDSDWYRRAAEHACDARR HHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH NVIQLIYRDKSFENSAKDYQFGLLAMNEHWSSGLDDIRDTLRHPHWLAMPSPERPFVTHD HHHHHHHHCCCCCCCCCCCEEEEEEECCHHCCCHHHHHHHHCCCEEEECCCCCCCCEECC VHRGNGDRE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA