| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is yhbW [H]
Identifier: 73539368
GI number: 73539368
Start: 2350398
End: 2351411
Strand: Direct
Name: yhbW [H]
Synonym: Reut_B5546
Alternate gene names: 73539368
Gene position: 2350398-2351411 (Clockwise)
Preceding gene: 73539366
Following gene: 73539370
Centisome position: 86.22
GC content: 67.26
Gene sequence:
>1014_bases ATGACGACCCCGATCCCGTATTCCGTTCTCGATCTCGCGCCCATCGCGCAAGGCAGCGATGCCGGCCAGGCCATGCGCAA CTCGCTGGACCTTGCGCAGCACGCCGAGCGTCTTGGCTACCGCCGCTTCTGGCTGGCCGAGCACCACAATATGCCCGGCA TTGCCAGCGCCGCGACTGCGGTGTTGATCGGCTATGTGGCCAATGGCACCAGCACGATTCGCGTGGGCTCCGGCGGCGTG ATGCTTCCCAACCATTCGCCGCTTGTCGTGGCCGAGCAGTTCGGGACGCTGGCTTCGCTGTATCCAGGCCGCATCGACCT GGGCCTGGGCCGCGCACCCGGAACGGACCAGACAACGGCACGTGCTCTGCGCCGTCAACTGTCGCACGACACGGCCGACA CGTTCCCGCAGGATGTCGAGGAGCTGCAGGCCTATTTCGATGACGTGCGTCCCGGCCAGCGCCTGCGCGCCGTGCCCGGT GCGGGCCTGAAGGTGCCACTGTGGCTGCTCGGCTCGAGCCTGTTCAGTGCGCAGCTTTCGGCGGCAATGGGTTTGCCGTT TGCGTTCGCCTCGCATTTCGCACCGGGCTTCATGCGGCAGGCGGTGGACCTGTACCGGCGCACGTTCCGGCCTTCCGCGC AGCTCGACAGGCCCTATGTGATGCTCGGCCTCAATGTGTTCGCGGCAGAGACCAGTGACGAAGCGCGGCGCCTGTTCAGC TCGTTGCAGCAGCAGTTCCTGGCTCTGGTGCGCGGCACGCCGGGCCAGCTGCGTCCGCCCGTGGACGATATCGAGTCACT GTGGAACGAGAGCGAGGCGGACCATATCCGCCGTTCGCTGGCCTGCTCGGTGGTGGGCGATCCGGAAGCCGTGCGCGCCG GCATGCAGCGCTTCGTCGATGACTTGCATCCGGACGAACTGATGCTGACGGGCCAGATCTACGACCACGCGGCGCGCCTG CGCTCGTTTGAAATCGCCGCCGACGCGGCGCGCACGCTCGCGCCGGCAGTCTGA
Upstream 100 bases:
>100_bases CGCCAGCACGATTGCCGGGGTCTCACTAAGATAGCGGACGTTTCGATTTTCCCGCGCGGCGGCTGGCAAACGCCTGCCCA GCCGCGCCAAGGCAGCTTAC
Downstream 100 bases:
>100_bases CTGAGTATCAGGCGCCCGCGAGCCGGAACGCCGCGACTGCCTGCATCATGCGCTGGCCCTGTTCAGCCAGCGCATGCGCG GCGGCGGCCGATTCTTCCAC
Product: luciferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTTPIPYSVLDLAPIAQGSDAGQAMRNSLDLAQHAERLGYRRFWLAEHHNMPGIASAATAVLIGYVANGTSTIRVGSGGV MLPNHSPLVVAEQFGTLASLYPGRIDLGLGRAPGTDQTTARALRRQLSHDTADTFPQDVEELQAYFDDVRPGQRLRAVPG AGLKVPLWLLGSSLFSAQLSAAMGLPFAFASHFAPGFMRQAVDLYRRTFRPSAQLDRPYVMLGLNVFAAETSDEARRLFS SLQQQFLALVRGTPGQLRPPVDDIESLWNESEADHIRRSLACSVVGDPEAVRAGMQRFVDDLHPDELMLTGQIYDHAARL RSFEIAADAARTLAPAV
Sequences:
>Translated_337_residues MTTPIPYSVLDLAPIAQGSDAGQAMRNSLDLAQHAERLGYRRFWLAEHHNMPGIASAATAVLIGYVANGTSTIRVGSGGV MLPNHSPLVVAEQFGTLASLYPGRIDLGLGRAPGTDQTTARALRRQLSHDTADTFPQDVEELQAYFDDVRPGQRLRAVPG AGLKVPLWLLGSSLFSAQLSAAMGLPFAFASHFAPGFMRQAVDLYRRTFRPSAQLDRPYVMLGLNVFAAETSDEARRLFS SLQQQFLALVRGTPGQLRPPVDDIESLWNESEADHIRRSLACSVVGDPEAVRAGMQRFVDDLHPDELMLTGQIYDHAARL RSFEIAADAARTLAPAV >Mature_336_residues TTPIPYSVLDLAPIAQGSDAGQAMRNSLDLAQHAERLGYRRFWLAEHHNMPGIASAATAVLIGYVANGTSTIRVGSGGVM LPNHSPLVVAEQFGTLASLYPGRIDLGLGRAPGTDQTTARALRRQLSHDTADTFPQDVEELQAYFDDVRPGQRLRAVPGA GLKVPLWLLGSSLFSAQLSAAMGLPFAFASHFAPGFMRQAVDLYRRTFRPSAQLDRPYVMLGLNVFAAETSDEARRLFSS LQQQFLALVRGTPGQLRPPVDDIESLWNESEADHIRRSLACSVVGDPEAVRAGMQRFVDDLHPDELMLTGQIYDHAARLR SFEIAADAARTLAPAV
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=329, Percent_Identity=58.0547112462006, Blast_Score=393, Evalue=1e-111,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 36646; Mature: 36515
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPIPYSVLDLAPIAQGSDAGQAMRNSLDLAQHAERLGYRRFWLAEHHNMPGIASAATA CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHH VLIGYVANGTSTIRVGSGGVMLPNHSPLVVAEQFGTLASLYPGRIDLGLGRAPGTDQTTA HHHHHHCCCCCEEEECCCCEECCCCCCEEEHHHHHHHHHHCCCCEEECCCCCCCCCHHHH RALRRQLSHDTADTFPQDVEELQAYFDDVRPGQRLRAVPGAGLKVPLWLLGSSLFSAQLS HHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHH AAMGLPFAFASHFAPGFMRQAVDLYRRTFRPSAQLDRPYVMLGLNVFAAETSDEARRLFS HHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEECCCCHHHHHHHH SLQQQFLALVRGTPGQLRPPVDDIESLWNESEADHIRRSLACSVVGDPEAVRAGMQRFVD HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DLHPDELMLTGQIYDHAARLRSFEIAADAARTLAPAV HCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTPIPYSVLDLAPIAQGSDAGQAMRNSLDLAQHAERLGYRRFWLAEHHNMPGIASAATA CCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHH VLIGYVANGTSTIRVGSGGVMLPNHSPLVVAEQFGTLASLYPGRIDLGLGRAPGTDQTTA HHHHHHCCCCCEEEECCCCEECCCCCCEEEHHHHHHHHHHCCCCEEECCCCCCCCCHHHH RALRRQLSHDTADTFPQDVEELQAYFDDVRPGQRLRAVPGAGLKVPLWLLGSSLFSAQLS HHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHH AAMGLPFAFASHFAPGFMRQAVDLYRRTFRPSAQLDRPYVMLGLNVFAAETSDEARRLFS HHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEECCCCHHHHHHHH SLQQQFLALVRGTPGQLRPPVDDIESLWNESEADHIRRSLACSVVGDPEAVRAGMQRFVD HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DLHPDELMLTGQIYDHAARLRSFEIAADAARTLAPAV HCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]