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The map label for this gene is omp32 [H]

Identifier: 73539332

GI number: 73539332

Start: 2306521

End: 2307639

Strand: Direct

Name: omp32 [H]

Synonym: Reut_B5510

Alternate gene names: 73539332

Gene position: 2306521-2307639 (Clockwise)

Preceding gene: 73539331

Following gene: 73539334

Centisome position: 84.61

GC content: 64.79

Gene sequence:

>1119_bases
ATGAAGAGCAGGACAGGAGGAGCCAAAACCCCGATGAAACCGATCAAGCGCATCGCCGCAGCCGCAGCTTTGCTGCCGGG
GCTGGCAGCAGCACAATCCGTAACCATGTACGGCGTCGTCGACACCGGCGTCGAATACGTCAACAACATCGGCGCAGCCA
AGGACAATGTCCTCCGCGTGATGGGCAATACAGGCATGGTCCCCTCCCGCTGGGGCCTGCGCGGCACCGAAGACCTCGGC
GGCGGCCTGAAGAGCGTATTCGTACTGGAATCCGGCTTCTTTCCCGACAGCGGAACATCGTCGATGGGCGGCCGCCTGTT
TGGCCGGCAGGCCTTCGTCGGCCTGTCAGGCCGCTGGGGCCAGATCGCGTTCGGGCGCCAGAACACCATGCTGTTCTGGT
CCTATCTCGATTCCGACATCCTGGGCCCGAACATCTTCGGCTCCGCAAGCCTGGACAACTACATGACGTTCGGCCGCGCT
GACAATGCGGTCTCGTACAAGGGCACGTTCGGTGGCCTGACCGTCGGTGCGACGTACAGCTTTGGCCGCGACACCGTCAG
CGCTGGACCCAGCCCCGCCGGGACCAATTGCGCGGGCGAGAACGCTGCTGACAAGCGCGCATGCCGTGAGTGGTCGGCCT
TGCTGCAGTACCAGACCGACTGGTGGGGCGTGGCCGCAGCGTACGATGAAAACCGCGGCGGCCCGGGTGCGTTCGGCGGG
CTGACAAACAGCGGCCTGACCGACCGGCGCGCGACGGTCACGGGCTATGCCATTCTTGCCAACCGCGCCAAGGTCGGCGC
CGGTGTCATCCGTCGCGACAATGAAGGCAGCGCCACGCCGCGCAGCGATCTGTGGTACGTCGGGGGTTCCTACGACATCA
CGCCGGCCTTTAACGTCGCCGGGCAGGTCTATTCTCTGCGCTTCCACCACAGCGCCAACAAGGCCATGCTGTACGCATTA
CGTGGTACCTATGCCTTCTCGAAGCGCACATCGGTGTATGGCACCGTCGGCTACGTCGACAACAGCGGCCAGTCGGCCGT
GGCGGTCGATGGCGCGGCAACTCCGCCGCCCGGTGCTTCGCAGGCGGGCGCAATGCTGGGCATCAAGCATATCTTCTGA

Upstream 100 bases:

>100_bases
TTTGAACGAAATTCCCAAAACGGACGCGATAAAGACAAATCGCACGTCATTCAATAAAAGAAGACATGCAACGTCCGCAA
CAACCAGGGAAAGAGCAAAC

Downstream 100 bases:

>100_bases
TCGTCGCGACGTTCGCGGCGGGCAGCCCGCTTAGCCGTGGGTGCGGCGCGGTGCCAGGCCAGCCGCTGCCACCGCGCGGG
CCGCGAGCAGTGGCTCCGCG

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MKSRTGGAKTPMKPIKRIAAAAALLPGLAAAQSVTMYGVVDTGVEYVNNIGAAKDNVLRVMGNTGMVPSRWGLRGTEDLG
GGLKSVFVLESGFFPDSGTSSMGGRLFGRQAFVGLSGRWGQIAFGRQNTMLFWSYLDSDILGPNIFGSASLDNYMTFGRA
DNAVSYKGTFGGLTVGATYSFGRDTVSAGPSPAGTNCAGENAADKRACREWSALLQYQTDWWGVAAAYDENRGGPGAFGG
LTNSGLTDRRATVTGYAILANRAKVGAGVIRRDNEGSATPRSDLWYVGGSYDITPAFNVAGQVYSLRFHHSANKAMLYAL
RGTYAFSKRTSVYGTVGYVDNSGQSAVAVDGAATPPPGASQAGAMLGIKHIF

Sequences:

>Translated_372_residues
MKSRTGGAKTPMKPIKRIAAAAALLPGLAAAQSVTMYGVVDTGVEYVNNIGAAKDNVLRVMGNTGMVPSRWGLRGTEDLG
GGLKSVFVLESGFFPDSGTSSMGGRLFGRQAFVGLSGRWGQIAFGRQNTMLFWSYLDSDILGPNIFGSASLDNYMTFGRA
DNAVSYKGTFGGLTVGATYSFGRDTVSAGPSPAGTNCAGENAADKRACREWSALLQYQTDWWGVAAAYDENRGGPGAFGG
LTNSGLTDRRATVTGYAILANRAKVGAGVIRRDNEGSATPRSDLWYVGGSYDITPAFNVAGQVYSLRFHHSANKAMLYAL
RGTYAFSKRTSVYGTVGYVDNSGQSAVAVDGAATPPPGASQAGAMLGIKHIF
>Mature_372_residues
MKSRTGGAKTPMKPIKRIAAAAALLPGLAAAQSVTMYGVVDTGVEYVNNIGAAKDNVLRVMGNTGMVPSRWGLRGTEDLG
GGLKSVFVLESGFFPDSGTSSMGGRLFGRQAFVGLSGRWGQIAFGRQNTMLFWSYLDSDILGPNIFGSASLDNYMTFGRA
DNAVSYKGTFGGLTVGATYSFGRDTVSAGPSPAGTNCAGENAADKRACREWSALLQYQTDWWGVAAAYDENRGGPGAFGG
LTNSGLTDRRATVTGYAILANRAKVGAGVIRRDNEGSATPRSDLWYVGGSYDITPAFNVAGQVYSLRFHHSANKAMLYAL
RGTYAFSKRTSVYGTVGYVDNSGQSAVAVDGAATPPPGASQAGAMLGIKHIF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38958; Mature: 38958

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRTGGAKTPMKPIKRIAAAAALLPGLAAAQSVTMYGVVDTGVEYVNNIGAAKDNVLRV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHCCCCCCCEEEE
MGNTGMVPSRWGLRGTEDLGGGLKSVFVLESGFFPDSGTSSMGGRLFGRQAFVGLSGRWG
ECCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCEEEEECCCCCC
QIAFGRQNTMLFWSYLDSDILGPNIFGSASLDNYMTFGRADNAVSYKGTFGGLTVGATYS
EEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHEEECCCCCCEEECCCCCCEEEEEEEC
FGRDTVSAGPSPAGTNCAGENAADKRACREWSALLQYQTDWWGVAAAYDENRGGPGAFGG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
LTNSGLTDRRATVTGYAILANRAKVGAGVIRRDNEGSATPRSDLWYVGGSYDITPAFNVA
CCCCCCCCCCEEEEEEEEEECCHHHCCCEEEECCCCCCCCCCCEEEECCCEECCCHHHCC
GQVYSLRFHHSANKAMLYALRGTYAFSKRTSVYGTVGYVDNSGQSAVAVDGAATPPPGAS
CEEEEEEEECCCCCEEEEEEECCEEECCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCC
QAGAMLGIKHIF
CCCHHHHHHHCC
>Mature Secondary Structure
MKSRTGGAKTPMKPIKRIAAAAALLPGLAAAQSVTMYGVVDTGVEYVNNIGAAKDNVLRV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHCCCCCCCEEEE
MGNTGMVPSRWGLRGTEDLGGGLKSVFVLESGFFPDSGTSSMGGRLFGRQAFVGLSGRWG
ECCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCEEEEECCCCCC
QIAFGRQNTMLFWSYLDSDILGPNIFGSASLDNYMTFGRADNAVSYKGTFGGLTVGATYS
EEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHEEECCCCCCEEECCCCCCEEEEEEEC
FGRDTVSAGPSPAGTNCAGENAADKRACREWSALLQYQTDWWGVAAAYDENRGGPGAFGG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
LTNSGLTDRRATVTGYAILANRAKVGAGVIRRDNEGSATPRSDLWYVGGSYDITPAFNVA
CCCCCCCCCCEEEEEEEEEECCHHHCCCEEEECCCCCCCCCCCEEEECCCEECCCHHHCC
GQVYSLRFHHSANKAMLYALRGTYAFSKRTSVYGTVGYVDNSGQSAVAVDGAATPPPGAS
CEEEEEEEECCCCCEEEEEEECCEEECCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCC
QAGAMLGIKHIF
CCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]