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The map label for this gene is tdcF [C]

Identifier: 73539331

GI number: 73539331

Start: 2305682

End: 2306242

Strand: Direct

Name: tdcF [C]

Synonym: Reut_B5509

Alternate gene names: 73539331

Gene position: 2305682-2306242 (Clockwise)

Preceding gene: 73539330

Following gene: 73539332

Centisome position: 84.58

GC content: 60.78

Gene sequence:

>561_bases
ATGGGCTGCGGCGTCGGTTTGCGCGTGCAGCCTGAGCGCATCCATTTCTTCAGATATAAACAGGGGAGACAAGCAATGAA
GGTTTCGAAGTTCACTGCAGCGCTGCTGGCGTGCTGCGCACTGGCTGGCACCGCGCAGGCGGCCGAATACATGGAGCAGA
GCGAGCGCATCAAGGGCCGTTCCTACTCGCCTGCGGTCGTTACCGAAGGGGGACGCATCGTCTGGCTGGCTGGGGAAACG
ACGACCACCGATCTCAACGGCAAGGACATCAAGGGTGACTTCGAGGCGCAGGCGCGGACGGTGTTTGCGTTGATTGACCA
GACGCTTAGGCGCGCCGGTGGCAGCCTCAGGGACGTGGTCAGCATGACGGCGTATCTCACGGATGCTCGCAATGGCGCTA
CGTTCTCGAAGGTTCGCAAGGAGATGTTCCCGGATGGGAACTATCCGGCTAGCGCGCAGATTACGGTTTCTAACCTGGCG
GTGCCGGGGATGCAGGTTGAGGTGCAGGCGGTGGCGGTGATAGGGGATAGGTGTGTTAAGGGGACGTGCTTGGCTAAGTG
A

Upstream 100 bases:

>100_bases
GTCGATACGGTGCTGGTGGATGGCAGGGTGCTTGTGCGTAATGGCTGCCATACGCATGTCGATGTATCCGCCATCGTCAG
CGATGCGGCGGCATCGATTC

Downstream 100 bases:

>100_bases
GGGTTGTGGTTCTTGGCGTCTGCCAAGCGCCAAAGCCAAAATCCAAACAAAAAACCTTCATGCCGTTTCCGCGGTCAATT
GAAATTTCAGTTGACTGCGG

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: YjgF-Like Protein; YjgF Family Translation Initiation Inhibitor

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MGCGVGLRVQPERIHFFRYKQGRQAMKVSKFTAALLACCALAGTAQAAEYMEQSERIKGRSYSPAVVTEGGRIVWLAGET
TTTDLNGKDIKGDFEAQARTVFALIDQTLRRAGGSLRDVVSMTAYLTDARNGATFSKVRKEMFPDGNYPASAQITVSNLA
VPGMQVEVQAVAVIGDRCVKGTCLAK

Sequences:

>Translated_186_residues
MGCGVGLRVQPERIHFFRYKQGRQAMKVSKFTAALLACCALAGTAQAAEYMEQSERIKGRSYSPAVVTEGGRIVWLAGET
TTTDLNGKDIKGDFEAQARTVFALIDQTLRRAGGSLRDVVSMTAYLTDARNGATFSKVRKEMFPDGNYPASAQITVSNLA
VPGMQVEVQAVAVIGDRCVKGTCLAK
>Mature_185_residues
GCGVGLRVQPERIHFFRYKQGRQAMKVSKFTAALLACCALAGTAQAAEYMEQSERIKGRSYSPAVVTEGGRIVWLAGETT
TTDLNGKDIKGDFEAQARTVFALIDQTLRRAGGSLRDVVSMTAYLTDARNGATFSKVRKEMFPDGNYPASAQITVSNLAV
PGMQVEVQAVAVIGDRCVKGTCLAK

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20032; Mature: 19901

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCGVGLRVQPERIHFFRYKQGRQAMKVSKFTAALLACCALAGTAQAAEYMEQSERIKGR
CCCCCCCEECHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
SYSPAVVTEGGRIVWLAGETTTTDLNGKDIKGDFEAQARTVFALIDQTLRRAGGSLRDVV
CCCCEEEECCCEEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
SMTAYLTDARNGATFSKVRKEMFPDGNYPASAQITVSNLAVPGMQVEVQAVAVIGDRCVK
HHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCEECCCCEEEEEEEEEECCHHCC
GTCLAK
CEECCC
>Mature Secondary Structure 
GCGVGLRVQPERIHFFRYKQGRQAMKVSKFTAALLACCALAGTAQAAEYMEQSERIKGR
CCCCCCEECHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
SYSPAVVTEGGRIVWLAGETTTTDLNGKDIKGDFEAQARTVFALIDQTLRRAGGSLRDVV
CCCCEEEECCCEEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
SMTAYLTDARNGATFSKVRKEMFPDGNYPASAQITVSNLAVPGMQVEVQAVAVIGDRCVK
HHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCEECCCCEEEEEEEEEECCHHCC
GTCLAK
CEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA