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The map label for this gene is amnD [H]

Identifier: 73539323

GI number: 73539323

Start: 2298314

End: 2298745

Strand: Direct

Name: amnD [H]

Synonym: Reut_B5501

Alternate gene names: 73539323

Gene position: 2298314-2298745 (Clockwise)

Preceding gene: 73539322

Following gene: 73539324

Centisome position: 84.31

GC content: 62.5

Gene sequence:

>432_bases
ATGCCGACAGAGGCGCATCTGGTGCAGGGCAAGGCAAAGCCACGGGGCCGTTTCCCGCACTGCAAGCGCGCGGGCGATTT
CCTGTTCATCTCGGGCACAAGCTCGCGCCTGCCGGACAACAGCTTTGCCGGCGCGCAAGCCGACGAGATGGGCGTGACCC
AACTCGACATCCGCGTGCAGACGCGCGCGGTGATCGAGAATATCCGCGACATCCTGGTGAACGCCGGCGCGACCCTGGCC
GATCTGGTCGAGACGCAGGTGTTCCTCGTCAACATGAATGACTTCGGCGGCTTCAATGAAGTTTGGGCCGAGTATTTCGA
CTACGACGGGCCTACACGGACGACAGTAGCGGTGCACCAGCTTCCGCATCCGCACCTGCTTATCGAGATCAAGGGCACGG
CGTACAAGCCGCTGGCCAGAAAGGAGGCATGA

Upstream 100 bases:

>100_bases
ACACGCTGGGCAGCGTGTCGTTCACTACGCGTGCGGGCATGCCAGACTGACTGCCGTATCCGCATCGACAACGCATTCAA
CAGCTACCAGGAGACCAACC

Downstream 100 bases:

>100_bases
TATGTTCGACCTGAAATACGGCCGGCCGCTGAACTTCAAGCGCTGGCTCGACGACCACGCCGACAAGCTGAAGCCGCCGG
TTGGCAACCAGCAGATCTGG

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MPTEAHLVQGKAKPRGRFPHCKRAGDFLFISGTSSRLPDNSFAGAQADEMGVTQLDIRVQTRAVIENIRDILVNAGATLA
DLVETQVFLVNMNDFGGFNEVWAEYFDYDGPTRTTVAVHQLPHPHLLIEIKGTAYKPLARKEA

Sequences:

>Translated_143_residues
MPTEAHLVQGKAKPRGRFPHCKRAGDFLFISGTSSRLPDNSFAGAQADEMGVTQLDIRVQTRAVIENIRDILVNAGATLA
DLVETQVFLVNMNDFGGFNEVWAEYFDYDGPTRTTVAVHQLPHPHLLIEIKGTAYKPLARKEA
>Mature_142_residues
PTEAHLVQGKAKPRGRFPHCKRAGDFLFISGTSSRLPDNSFAGAQADEMGVTQLDIRVQTRAVIENIRDILVNAGATLAD
LVETQVFLVNMNDFGGFNEVWAEYFDYDGPTRTTVAVHQLPHPHLLIEIKGTAYKPLARKEA

Specific function: Involved in the modified meta-cleavage pathway for the 2-aminophenol catabolism. Only active toward 2-aminomuconic acid [H]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2-aminomuconate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1787245, Length=135, Percent_Identity=28.8888888888889, Blast_Score=62, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320899, Length=101, Percent_Identity=32.6732673267327, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: =3.5.99.5 [H]

Molecular weight: Translated: 15821; Mature: 15690

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTEAHLVQGKAKPRGRFPHCKRAGDFLFISGTSSRLPDNSFAGAQADEMGVTQLDIRVQ
CCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEH
TRAVIENIRDILVNAGATLADLVETQVFLVNMNDFGGFNEVWAEYFDYDGPTRTTVAVHQ
HHHHHHHHHHHHHCCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEC
LPHPHLLIEIKGTAYKPLARKEA
CCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
PTEAHLVQGKAKPRGRFPHCKRAGDFLFISGTSSRLPDNSFAGAQADEMGVTQLDIRVQ
CCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEH
TRAVIENIRDILVNAGATLADLVETQVFLVNMNDFGGFNEVWAEYFDYDGPTRTTVAVHQ
HHHHHHHHHHHHHCCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEC
LPHPHLLIEIKGTAYKPLARKEA
CCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9169437; 11081795 [H]