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The map label for this gene is capD [H]

Identifier: 73539198

GI number: 73539198

Start: 2158246

End: 2160240

Strand: Reverse

Name: capD [H]

Synonym: Reut_B5376

Alternate gene names: 73539198

Gene position: 2160240-2158246 (Counterclockwise)

Preceding gene: 73539201

Following gene: 73539197

Centisome position: 79.24

GC content: 59.0

Gene sequence:

>1995_bases
ATGAGGATCTACCCTCCCGTCTGGCTAACGTCCCTTCCTCGTCGTCAAAAGATTGCGCTGATGGTCTGCGCGGACCTGAT
TGCCCTTCCCGTGTGCTTTTCGCTGGCGCTGTTCCTGCGTGCCGGCAATACAGAACTACTCCACCAGTACGGGTTCTTGC
CTTCACTGATCATCTCGGCCTGCACAATTCCGGTGTTCTCATACAGCGGACTGTATCGAATGGTCGTTCGATACTTCGAC
CTCAGGGTCCTGTGGGTCTCCGGTGCAAGCCTGGCTTGTCTGGTTGCCCTGACTTACGCGCTATCTTATCTCGTGACTAT
CGGCCACCTTCCCAGGACCGGCCTCCTCATCTACTGGTTCATCGCGTTCTCATACGTCGTCATCTCGCGCTTCCTGGCGC
GGGCCGTCATCACGCGCGCGCAACAGCGCAAACAGACAGGCGACCGCGATGTCCTGCGGGTTGCCATCTTCGGTGCTGGT
GAAGCAGGGGCGCAACTAGCCACCGCCATGCGCGCAAGCTCGGGCCACCGACCTGTCTGCTTCTTCGATGACGACATCTC
ACTCGACAAGAAGATCTTCTCCGACCTCCCTGTGTACTTCAGCGACAACATGAAGGACCAGATCAACCAGTTGGGCATCA
ACGAGGTCGTGCTCGCAGTTCCCTCTCTCTCCATCAAGCGTCGCAAGCAAATCGTTGACAAGCTGCACCGGTACGCAGTC
AGTGTTCGAACGCTCCCGACACTGCTTGAGCTTGTCGACCGCAAGATCACCATGCAGTCGGTGCGAGACATCAAGATCGA
GGATTTGCTGGGCAGGGATATCGTGCCGCCGCGAGAAGAGTTGTTTGCAAGATGCACCCACAGAAAAGTCGTGATGGTTA
CGGGCGCAGGAGGTTCCATCGGCAGTGAATTGTGCCGGCAGATCGCCAGCCGCCAACCCAGCAAGCTCATACTGTTCGAT
CATTCCGAATTCGCGCTATACGTCATAGAGCAGGAGCTGCGGCGCACGTTTCCCGAGTTGCAGATCGTCGCGCGCATCGG
CTCTGTCTGCGACGTCGAAGCCGTGGCGGCCGCCATGCGGGGTCAAAGGATCGATTCGATCTATCACGCCGCGGCCTACA
AGCATGTACCGATGGTTGAGGCCAACATGCCAGAGGGCATACGCAACAATGTCCTTGGGTCCGCAACGATCGCCAACATG
GCCGATCATTTCGGCGTAAAGACGTGCGTCTTGATTTCCACGGACAAGGCGGTACGTCCAACCAACATCATGGGTGCCAG
CAAGCGCATTGCAGAGTTGGCGTTTCAGGCTGCCGCGTCACGGCCGAATACGAGCACCACGTTTTCGATGGTTCGCTTCG
GCAACGTACTGGGCTCGTCCGGCTCGGTTGTTCCACTGTTCCGCAAGCAGATCCGCGCCGGCGGCCCGGTGACCATCACG
CACCCGGACGTCATCCGCTTCTTCATGCTGATTCCCGAAGCGGCACAGCTGGTCATCCAGGCCGGCGCCATGGCCCAGGG
CGGAGAGGTCTTTGTCCTCGACATGGGCAAGCCGGTCAGGATTACGGATCTTGCCCGCACCATGATCGAGATGTCCGGGC
TTGTCGAGAAGACACGCAAGAATCCCGCTGGCGATATCGAAATCAAATTCGTCGGCTTGCGCCCCGGCGAGAAGCTCTAC
GAGGAGTTGCTGATCGGTGGGGAAGTGACGCCAAGCGAGCACGAACGCATCATGTGTTCGCACGAGCCCTTCCTGGAAGA
ATCGGAGTATCGCGAGAAGCTTGGCAAGCTGTTGGCAGCCTGTGAATCCCGTGATGATCTCGCGATCCAGCTGGCGGTGC
AAAACCTGGTGCCCGAATACGCTCCCTACAGCTCGCTGGACACGCCGCGTGACAGTACAGCGGTTGCGGACGAGTCCCGG
CAACCGACGCCATTGCCAGTGCTCAATCTGAAGCCCGCGCAAGCCGGGATCTCCGGAATCTCTGGCGGCTCCTGA

Upstream 100 bases:

>100_bases
TGCAAGACGGCGACTGGACTTCGGGGGCACTTTGGAACCCGAAAGCGAGCGGTTCGACTGAAAGCCCCGCTCAAGGTCCA
GTAGAAAAGAGCTCCCGAAA

Downstream 100 bases:

>100_bases
CGACAGTCACGAGTACCAGTCCCGCTTGCCGCGTGCACCACGCGGCCAAGGACACCGTTCCGCTGGCGGCAGCCGGACCT
GGACCTGGCACACCGCACTC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 664; Mature: 664

Protein sequence:

>664_residues
MRIYPPVWLTSLPRRQKIALMVCADLIALPVCFSLALFLRAGNTELLHQYGFLPSLIISACTIPVFSYSGLYRMVVRYFD
LRVLWVSGASLACLVALTYALSYLVTIGHLPRTGLLIYWFIAFSYVVISRFLARAVITRAQQRKQTGDRDVLRVAIFGAG
EAGAQLATAMRASSGHRPVCFFDDDISLDKKIFSDLPVYFSDNMKDQINQLGINEVVLAVPSLSIKRRKQIVDKLHRYAV
SVRTLPTLLELVDRKITMQSVRDIKIEDLLGRDIVPPREELFARCTHRKVVMVTGAGGSIGSELCRQIASRQPSKLILFD
HSEFALYVIEQELRRTFPELQIVARIGSVCDVEAVAAAMRGQRIDSIYHAAAYKHVPMVEANMPEGIRNNVLGSATIANM
ADHFGVKTCVLISTDKAVRPTNIMGASKRIAELAFQAAASRPNTSTTFSMVRFGNVLGSSGSVVPLFRKQIRAGGPVTIT
HPDVIRFFMLIPEAAQLVIQAGAMAQGGEVFVLDMGKPVRITDLARTMIEMSGLVEKTRKNPAGDIEIKFVGLRPGEKLY
EELLIGGEVTPSEHERIMCSHEPFLEESEYREKLGKLLAACESRDDLAIQLAVQNLVPEYAPYSSLDTPRDSTAVADESR
QPTPLPVLNLKPAQAGISGISGGS

Sequences:

>Translated_664_residues
MRIYPPVWLTSLPRRQKIALMVCADLIALPVCFSLALFLRAGNTELLHQYGFLPSLIISACTIPVFSYSGLYRMVVRYFD
LRVLWVSGASLACLVALTYALSYLVTIGHLPRTGLLIYWFIAFSYVVISRFLARAVITRAQQRKQTGDRDVLRVAIFGAG
EAGAQLATAMRASSGHRPVCFFDDDISLDKKIFSDLPVYFSDNMKDQINQLGINEVVLAVPSLSIKRRKQIVDKLHRYAV
SVRTLPTLLELVDRKITMQSVRDIKIEDLLGRDIVPPREELFARCTHRKVVMVTGAGGSIGSELCRQIASRQPSKLILFD
HSEFALYVIEQELRRTFPELQIVARIGSVCDVEAVAAAMRGQRIDSIYHAAAYKHVPMVEANMPEGIRNNVLGSATIANM
ADHFGVKTCVLISTDKAVRPTNIMGASKRIAELAFQAAASRPNTSTTFSMVRFGNVLGSSGSVVPLFRKQIRAGGPVTIT
HPDVIRFFMLIPEAAQLVIQAGAMAQGGEVFVLDMGKPVRITDLARTMIEMSGLVEKTRKNPAGDIEIKFVGLRPGEKLY
EELLIGGEVTPSEHERIMCSHEPFLEESEYREKLGKLLAACESRDDLAIQLAVQNLVPEYAPYSSLDTPRDSTAVADESR
QPTPLPVLNLKPAQAGISGISGGS
>Mature_664_residues
MRIYPPVWLTSLPRRQKIALMVCADLIALPVCFSLALFLRAGNTELLHQYGFLPSLIISACTIPVFSYSGLYRMVVRYFD
LRVLWVSGASLACLVALTYALSYLVTIGHLPRTGLLIYWFIAFSYVVISRFLARAVITRAQQRKQTGDRDVLRVAIFGAG
EAGAQLATAMRASSGHRPVCFFDDDISLDKKIFSDLPVYFSDNMKDQINQLGINEVVLAVPSLSIKRRKQIVDKLHRYAV
SVRTLPTLLELVDRKITMQSVRDIKIEDLLGRDIVPPREELFARCTHRKVVMVTGAGGSIGSELCRQIASRQPSKLILFD
HSEFALYVIEQELRRTFPELQIVARIGSVCDVEAVAAAMRGQRIDSIYHAAAYKHVPMVEANMPEGIRNNVLGSATIANM
ADHFGVKTCVLISTDKAVRPTNIMGASKRIAELAFQAAASRPNTSTTFSMVRFGNVLGSSGSVVPLFRKQIRAGGPVTIT
HPDVIRFFMLIPEAAQLVIQAGAMAQGGEVFVLDMGKPVRITDLARTMIEMSGLVEKTRKNPAGDIEIKFVGLRPGEKLY
EELLIGGEVTPSEHERIMCSHEPFLEESEYREKLGKLLAACESRDDLAIQLAVQNLVPEYAPYSSLDTPRDSTAVADESR
QPTPLPVLNLKPAQAGISGISGGS

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 73180; Mature: 73180

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIYPPVWLTSLPRRQKIALMVCADLIALPVCFSLALFLRAGNTELLHQYGFLPSLIISA
CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHH
CTIPVFSYSGLYRMVVRYFDLRVLWVSGASLACLVALTYALSYLVTIGHLPRTGLLIYWF
HHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
IAFSYVVISRFLARAVITRAQQRKQTGDRDVLRVAIFGAGEAGAQLATAMRASSGHRPVC
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEE
FFDDDISLDKKIFSDLPVYFSDNMKDQINQLGINEVVLAVPSLSIKRRKQIVDKLHRYAV
EECCCCCHHHHHHHCCCEEECCCHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SVRTLPTLLELVDRKITMQSVRDIKIEDLLGRDIVPPREELFARCTHRKVVMVTGAGGSI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCH
GSELCRQIASRQPSKLILFDHSEFALYVIEQELRRTFPELQIVARIGSVCDVEAVAAAMR
HHHHHHHHHCCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GQRIDSIYHAAAYKHVPMVEANMPEGIRNNVLGSATIANMADHFGVKTCVLISTDKAVRP
CCHHHHHHHHHHHCCCCEEECCCCCCHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCC
TNIMGASKRIAELAFQAAASRPNTSTTFSMVRFGNVLGSSGSVVPLFRKQIRAGGPVTIT
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEE
HPDVIRFFMLIPEAAQLVIQAGAMAQGGEVFVLDMGKPVRITDLARTMIEMSGLVEKTRK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHCC
NPAGDIEIKFVGLRPGEKLYEELLIGGEVTPSEHERIMCSHEPFLEESEYREKLGKLLAA
CCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
CESRDDLAIQLAVQNLVPEYAPYSSLDTPRDSTAVADESRQPTPLPVLNLKPAQAGISGI
HCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCC
SGGS
CCCC
>Mature Secondary Structure
MRIYPPVWLTSLPRRQKIALMVCADLIALPVCFSLALFLRAGNTELLHQYGFLPSLIISA
CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHH
CTIPVFSYSGLYRMVVRYFDLRVLWVSGASLACLVALTYALSYLVTIGHLPRTGLLIYWF
HHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
IAFSYVVISRFLARAVITRAQQRKQTGDRDVLRVAIFGAGEAGAQLATAMRASSGHRPVC
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEE
FFDDDISLDKKIFSDLPVYFSDNMKDQINQLGINEVVLAVPSLSIKRRKQIVDKLHRYAV
EECCCCCHHHHHHHCCCEEECCCHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SVRTLPTLLELVDRKITMQSVRDIKIEDLLGRDIVPPREELFARCTHRKVVMVTGAGGSI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCH
GSELCRQIASRQPSKLILFDHSEFALYVIEQELRRTFPELQIVARIGSVCDVEAVAAAMR
HHHHHHHHHCCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GQRIDSIYHAAAYKHVPMVEANMPEGIRNNVLGSATIANMADHFGVKTCVLISTDKAVRP
CCHHHHHHHHHHHCCCCEEECCCCCCHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCC
TNIMGASKRIAELAFQAAASRPNTSTTFSMVRFGNVLGSSGSVVPLFRKQIRAGGPVTIT
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEE
HPDVIRFFMLIPEAAQLVIQAGAMAQGGEVFVLDMGKPVRITDLARTMIEMSGLVEKTRK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHCC
NPAGDIEIKFVGLRPGEKLYEELLIGGEVTPSEHERIMCSHEPFLEESEYREKLGKLLAA
CCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
CESRDDLAIQLAVQNLVPEYAPYSSLDTPRDSTAVADESRQPTPLPVLNLKPAQAGISGI
HCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCC
SGGS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]