Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
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Accession | NC_007348 |
Length | 2,726,152 |
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The map label for this gene is 73539090
Identifier: 73539090
GI number: 73539090
Start: 2018664
End: 2021132
Strand: Direct
Name: 73539090
Synonym: Reut_B5267
Alternate gene names: NA
Gene position: 2018664-2021132 (Clockwise)
Preceding gene: 73539081
Following gene: 73539091
Centisome position: 74.05
GC content: 62.41
Gene sequence:
>2469_bases ATGGCTAGTGTGGTGGAGGAACCAAAGGCGACTGCGAGCGATCTGCCCAAGGGAATTACCGGTCGACAGGCGTATTTCCT GGAGGTCCCCAGCGCGCCCACTGCCGCCGCGCTTTCAGTGGTGTCGTTCAAGGCCGTGGAGCGCCTGGGTGAACCCTATG TGGTGACCGTGCAGCTGACGCATCCGCTGGAACTGGACCGCGCGGACTATCTTGGTCGCGACGCGGCGTTCGTGATCGAC GCCGCCGACGGTGACGAGCCTCGCCGGTTTGCCGGCTGCATTACCCGCTTCGCCAAGACCAGGCAGACGCGCGACTTCGC TGCCTATGAAATGGTGGTGGAACCCCTCGTGGCGCGCTTGCGGCTCACGCATGCCAGCCGTGTCTATCAGCACAAGACCG CGCCGCAGATCATCGAGGCCATCCTGCGGCGGCACGACCTCAAGGGACACCAGTTCGCCTTCAAGACGCGCCGCCAGTAT CCGCAGCACAAGTTCCGGCTCCAGTACCAGATGTCCGACTGGGACTACATCCGCCTGCTGATGGAGCAGGAAGGGTTGTA CAGCTACTTCGTTCCGGGCAAATTCGGGGAAAACTGGGTGGTGGCGGACGATATCGACCACTACCTTTATCAGCCGGAAC TGCGGCCACCGTATCAGGAGACAGCGGGGCTGGAATCCGGGGTGGAAGCCGTCTACGCCATCAAGACCGTCGCCAGGACG GTGGCGCAATCGGTCCGGGCCGCTGACCGCAACCCGGCGCAGGCCTACGAGCGCTTCCAGGCCGAGGCGAACATCGCGCG CAAGGACCGCACGACTTACGGCCAGCCATACTTCTATGGCACGCACCACCTGGATCAGGACAGCGCCAAGTGGGAAGCGC AGCTACGCCACGAGGCAGCCATTGCCGGGCAAGTCGTCTATGAGGGCGAGAGCAACGTGCTGGAGTTGCGCCCGGCACGC ATCCTGCGCCTGAACCTTGCGCTCCTCGATGCGCCCAACGGTCAGGTGATCACCGAGGTCACGCACAGCGGCGCGCGCGA TCAGGCCTACCGCAATTCCTTCAAGTCCATTCCGTCCGACCGGCGCTTCCGGCTGCCGCTAGACGAAGCGAACTGGCCGC GCATTGCAGGCACGCTCGGTGCACGCGTCACGTCACCGAACAAGTACAAGTACGCCTACCTGACCCAGGACGGGCATTAC ACGGTGCGCTTCGACCTGGACTTCGAGGAGTGGCCCTCCGGCGGCGAGAGCGTGCCGCTACGCCTCGCCAAACCCTTCGC TGGCGGCCTTCAGACTGGCTTCCACTTCCCGCTGCTGGACGGAACTGAGGTGGCCATTGCCTTCACGGACGGGAACCCGA ACAAGCCCTATATCGCGTCGGCCCACCACAACAGCTATCAGGGCGACCACATCACGACCGCGGACCGGTGGCTGTCGCGC AATGTTATCCGCACGCAGAGCAACAACAAGCTGCGCATGGAGGATTGGGAGGGCCAGGAAGGCATCAAGCTCTCGACGGA GTACGGCGGCAAGACCCAACTCAATCTGGGCTACCTGGTTGACGGCAAGAAGCAGAAACGCGGCGACGGCTTTGAATTGC GCACGTCCGGATGGGGTGCCGTGCGTGGGGGCAAGGGTCTGCTGATCTCGGCAGATGACCAGCCGAACGCCCACGGCCAG CAACTTGATATGGAGGCTGCAAAGGGGCTACTGCAGCAGGCGCTTCAGCAAAGCGAGGCGTTGGGTGCTGCGGCCAAGGC AGCCGAGGCGGTAGCCGCTGACTACGCTAGGCAGAAAGCCCTCCTCGATGAGTCTCTCGCACAACTCAAGAGAGCGGGAA TTCTCGTCAGTGCTCCTGCCGGCGTGGCGCTGGCCTCCGGTAATGACCTGCAATGCACAGCCGCCCAAAACCTCATTGCT ACGGCGGGCAGCCACGCGGATTTCAGCATCGCAAAACGCTTCACGCTGGCTGCGGGCGACTTGGTGTCCATCTTTGCCCA GAAGCTGGGCGTCAAGTTGGTTGCTGCGCGGGGAAAGGTTGAACTCCAGGCCCAGAGCGACGAAATGCGTCTTCTCGCGG ATAAACACATGACGATTACCAGTGCAAATGGTCGCGTCGTCATCGAGGCAAAGGACGAGCTGCTGCTCAAGTGTGGCGGC TCGTATCTGCGAATGTCGTCAACCGGGATCGAGGACGGAACGCGCGGAGACCGGACCATCAGGTCGGCGGCATTCAGCCG CCAGGGACCCAGCTCGCTGGCTCAGTCGATGAACACGTGGCAGCACGCAAAATTCAATGACACCTATGTCCTTCGGAATC CATCGACAGGGGAGCCACTCTCCAACTCTGCCATTGAAATAGCCAGAGGCGACGGCACGAGACTCAAGATGCAAACGGAC GCGTCCGGCAAGACGCCAGTCCAGAAGAGCATCTTCGTGGAGCCCGTACAAATTCGTCCGCTCGACTAA
Upstream 100 bases:
>100_bases TAATAAATTAGCGTACCGTCCGGACCGAGGAGAACGTGAGAACGCCCGAATTGCCGCTCTCCGGCAGGGTTCGATCACGT TGAGAACGGAGCAAAGAACA
Downstream 100 bases:
>100_bases CTCCCCAATTCGTTGCGAAGACTATGGCCGAATCCAATACCGTCATCATTCACAGTACCGTCGACAAGAACGGCGATCAG TACAGTTCCGCGACACTGAC
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Rhs Family Protein; Vgr-Related Protein; Vgr Related Protein; VGR-Like Protein; VgrG Protein; Rhs Accessory Genetic Element; Rhs-Family Protein; Replication/Virulence Associated Protein; Type VI Secretion System Rhs Element Vgr Protein; Rhs Element Vgr Family; VGR-Related Type VI Secretion System Protein; Rhs Element Vgr ProteinGp5-Like; Rhs Element Protein VgrE; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Element Vgr Related Protein
Number of amino acids: Translated: 822; Mature: 821
Protein sequence:
>822_residues MASVVEEPKATASDLPKGITGRQAYFLEVPSAPTAAALSVVSFKAVERLGEPYVVTVQLTHPLELDRADYLGRDAAFVID AADGDEPRRFAGCITRFAKTRQTRDFAAYEMVVEPLVARLRLTHASRVYQHKTAPQIIEAILRRHDLKGHQFAFKTRRQY PQHKFRLQYQMSDWDYIRLLMEQEGLYSYFVPGKFGENWVVADDIDHYLYQPELRPPYQETAGLESGVEAVYAIKTVART VAQSVRAADRNPAQAYERFQAEANIARKDRTTYGQPYFYGTHHLDQDSAKWEAQLRHEAAIAGQVVYEGESNVLELRPAR ILRLNLALLDAPNGQVITEVTHSGARDQAYRNSFKSIPSDRRFRLPLDEANWPRIAGTLGARVTSPNKYKYAYLTQDGHY TVRFDLDFEEWPSGGESVPLRLAKPFAGGLQTGFHFPLLDGTEVAIAFTDGNPNKPYIASAHHNSYQGDHITTADRWLSR NVIRTQSNNKLRMEDWEGQEGIKLSTEYGGKTQLNLGYLVDGKKQKRGDGFELRTSGWGAVRGGKGLLISADDQPNAHGQ QLDMEAAKGLLQQALQQSEALGAAAKAAEAVAADYARQKALLDESLAQLKRAGILVSAPAGVALASGNDLQCTAAQNLIA TAGSHADFSIAKRFTLAAGDLVSIFAQKLGVKLVAARGKVELQAQSDEMRLLADKHMTITSANGRVVIEAKDELLLKCGG SYLRMSSTGIEDGTRGDRTIRSAAFSRQGPSSLAQSMNTWQHAKFNDTYVLRNPSTGEPLSNSAIEIARGDGTRLKMQTD ASGKTPVQKSIFVEPVQIRPLD
Sequences:
>Translated_822_residues MASVVEEPKATASDLPKGITGRQAYFLEVPSAPTAAALSVVSFKAVERLGEPYVVTVQLTHPLELDRADYLGRDAAFVID AADGDEPRRFAGCITRFAKTRQTRDFAAYEMVVEPLVARLRLTHASRVYQHKTAPQIIEAILRRHDLKGHQFAFKTRRQY PQHKFRLQYQMSDWDYIRLLMEQEGLYSYFVPGKFGENWVVADDIDHYLYQPELRPPYQETAGLESGVEAVYAIKTVART VAQSVRAADRNPAQAYERFQAEANIARKDRTTYGQPYFYGTHHLDQDSAKWEAQLRHEAAIAGQVVYEGESNVLELRPAR ILRLNLALLDAPNGQVITEVTHSGARDQAYRNSFKSIPSDRRFRLPLDEANWPRIAGTLGARVTSPNKYKYAYLTQDGHY TVRFDLDFEEWPSGGESVPLRLAKPFAGGLQTGFHFPLLDGTEVAIAFTDGNPNKPYIASAHHNSYQGDHITTADRWLSR NVIRTQSNNKLRMEDWEGQEGIKLSTEYGGKTQLNLGYLVDGKKQKRGDGFELRTSGWGAVRGGKGLLISADDQPNAHGQ QLDMEAAKGLLQQALQQSEALGAAAKAAEAVAADYARQKALLDESLAQLKRAGILVSAPAGVALASGNDLQCTAAQNLIA TAGSHADFSIAKRFTLAAGDLVSIFAQKLGVKLVAARGKVELQAQSDEMRLLADKHMTITSANGRVVIEAKDELLLKCGG SYLRMSSTGIEDGTRGDRTIRSAAFSRQGPSSLAQSMNTWQHAKFNDTYVLRNPSTGEPLSNSAIEIARGDGTRLKMQTD ASGKTPVQKSIFVEPVQIRPLD >Mature_821_residues ASVVEEPKATASDLPKGITGRQAYFLEVPSAPTAAALSVVSFKAVERLGEPYVVTVQLTHPLELDRADYLGRDAAFVIDA ADGDEPRRFAGCITRFAKTRQTRDFAAYEMVVEPLVARLRLTHASRVYQHKTAPQIIEAILRRHDLKGHQFAFKTRRQYP QHKFRLQYQMSDWDYIRLLMEQEGLYSYFVPGKFGENWVVADDIDHYLYQPELRPPYQETAGLESGVEAVYAIKTVARTV AQSVRAADRNPAQAYERFQAEANIARKDRTTYGQPYFYGTHHLDQDSAKWEAQLRHEAAIAGQVVYEGESNVLELRPARI LRLNLALLDAPNGQVITEVTHSGARDQAYRNSFKSIPSDRRFRLPLDEANWPRIAGTLGARVTSPNKYKYAYLTQDGHYT VRFDLDFEEWPSGGESVPLRLAKPFAGGLQTGFHFPLLDGTEVAIAFTDGNPNKPYIASAHHNSYQGDHITTADRWLSRN VIRTQSNNKLRMEDWEGQEGIKLSTEYGGKTQLNLGYLVDGKKQKRGDGFELRTSGWGAVRGGKGLLISADDQPNAHGQQ LDMEAAKGLLQQALQQSEALGAAAKAAEAVAADYARQKALLDESLAQLKRAGILVSAPAGVALASGNDLQCTAAQNLIAT AGSHADFSIAKRFTLAAGDLVSIFAQKLGVKLVAARGKVELQAQSDEMRLLADKHMTITSANGRVVIEAKDELLLKCGGS YLRMSSTGIEDGTRGDRTIRSAAFSRQGPSSLAQSMNTWQHAKFNDTYVLRNPSTGEPLSNSAIEIARGDGTRLKMQTDA SGKTPVQKSIFVEPVQIRPLD
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90742; Mature: 90611
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVVEEPKATASDLPKGITGRQAYFLEVPSAPTAAALSVVSFKAVERLGEPYVVTVQLT CCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEE HPLELDRADYLGRDAAFVIDAADGDEPRRFAGCITRFAKTRQTRDFAAYEMVVEPLVARL CCCCCCCHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RLTHASRVYQHKTAPQIIEAILRRHDLKGHQFAFKTRRQYPQHKFRLQYQMSDWDYIRLL HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHH MEQEGLYSYFVPGKFGENWVVADDIDHYLYQPELRPPYQETAGLESGVEAVYAIKTVART HHCCCCEEEECCCCCCCCEEEECCCHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHH VAQSVRAADRNPAQAYERFQAEANIARKDRTTYGQPYFYGTHHLDQDSAKWEAQLRHEAA HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH IAGQVVYEGESNVLELRPARILRLNLALLDAPNGQVITEVTHSGARDQAYRNSFKSIPSD HCCEEEECCCCCEEEECCCEEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCC RRFRLPLDEANWPRIAGTLGARVTSPNKYKYAYLTQDGHYTVRFDLDFEEWPSGGESVPL CEEECCCCCCCCCEEHHHHCCEECCCCCEEEEEEECCCCEEEEEECCHHHCCCCCCCCCE RLAKPFAGGLQTGFHFPLLDGTEVAIAFTDGNPNKPYIASAHHNSYQGDHITTADRWLSR EEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHC NVIRTQSNNKLRMEDWEGQEGIKLSTEYGGKTQLNLGYLVDGKKQKRGDGFELRTSGWGA CCEEECCCCEEEEECCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCE VRGGKGLLISADDQPNAHGQQLDMEAAKGLLQQALQQSEALGAAAKAAEAVAADYARQKA EECCCEEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDESLAQLKRAGILVSAPAGVALASGNDLQCTAAQNLIATAGSHADFSIAKRFTLAAGD HHHHHHHHHHHCCEEEECCCCEEEECCCCEEEHHHHHHHHHCCCCCCHHHHHHEECCCCH LVSIFAQKLGVKLVAARGKVELQAQSDEMRLLADKHMTITSANGRVVIEAKDELLLKCGG HHHHHHHHHCEEEEEECCEEEEEECCCCEEEEECCCEEEEECCCEEEEEECCHHHEECCC SYLRMSSTGIEDGTRGDRTIRSAAFSRQGPSSLAQSMNTWQHAKFNDTYVLRNPSTGEPL CEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC SNSAIEIARGDGTRLKMQTDASGKTPVQKSIFVEPVQIRPLD CCCCEEEEECCCCEEEEEECCCCCCCCCCCEEECCEEEEECC >Mature Secondary Structure ASVVEEPKATASDLPKGITGRQAYFLEVPSAPTAAALSVVSFKAVERLGEPYVVTVQLT CCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEE HPLELDRADYLGRDAAFVIDAADGDEPRRFAGCITRFAKTRQTRDFAAYEMVVEPLVARL CCCCCCCHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RLTHASRVYQHKTAPQIIEAILRRHDLKGHQFAFKTRRQYPQHKFRLQYQMSDWDYIRLL HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHH MEQEGLYSYFVPGKFGENWVVADDIDHYLYQPELRPPYQETAGLESGVEAVYAIKTVART HHCCCCEEEECCCCCCCCEEEECCCHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHH VAQSVRAADRNPAQAYERFQAEANIARKDRTTYGQPYFYGTHHLDQDSAKWEAQLRHEAA HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH IAGQVVYEGESNVLELRPARILRLNLALLDAPNGQVITEVTHSGARDQAYRNSFKSIPSD HCCEEEECCCCCEEEECCCEEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCC RRFRLPLDEANWPRIAGTLGARVTSPNKYKYAYLTQDGHYTVRFDLDFEEWPSGGESVPL CEEECCCCCCCCCEEHHHHCCEECCCCCEEEEEEECCCCEEEEEECCHHHCCCCCCCCCE RLAKPFAGGLQTGFHFPLLDGTEVAIAFTDGNPNKPYIASAHHNSYQGDHITTADRWLSR EEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHC NVIRTQSNNKLRMEDWEGQEGIKLSTEYGGKTQLNLGYLVDGKKQKRGDGFELRTSGWGA CCEEECCCCEEEEECCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCE VRGGKGLLISADDQPNAHGQQLDMEAAKGLLQQALQQSEALGAAAKAAEAVAADYARQKA EECCCEEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDESLAQLKRAGILVSAPAGVALASGNDLQCTAAQNLIATAGSHADFSIAKRFTLAAGD HHHHHHHHHHHCCEEEECCCCEEEECCCCEEEHHHHHHHHHCCCCCCHHHHHHEECCCCH LVSIFAQKLGVKLVAARGKVELQAQSDEMRLLADKHMTITSANGRVVIEAKDELLLKCGG HHHHHHHHHCEEEEEECCEEEEEECCCCEEEEECCCEEEEECCCEEEEEECCHHHEECCC SYLRMSSTGIEDGTRGDRTIRSAAFSRQGPSSLAQSMNTWQHAKFNDTYVLRNPSTGEPL CEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC SNSAIEIARGDGTRLKMQTDASGKTPVQKSIFVEPVQIRPLD CCCCEEEEECCCCEEEEEECCCCCCCCCCCEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA