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The map label for this gene is yqfA [C]

Identifier: 73539033

GI number: 73539033

Start: 1957344

End: 1957961

Strand: Direct

Name: yqfA [C]

Synonym: Reut_B5210

Alternate gene names: 73539033

Gene position: 1957344-1957961 (Clockwise)

Preceding gene: 73539031

Following gene: 73539040

Centisome position: 71.8

GC content: 60.03

Gene sequence:

>618_bases
ATGTATCGCGGCGAACGATTCAACGGGTACAGCCACCTGGCCGGCGCCATCCTGGCAGCCGCCGGCATGGCGGTGCTGGT
GACATCCTCGGCCCTCTACCACGATGCGTGGAAGGTGGTCAGTTCAGTGGTCTACGGGACCACGCTGGTTCTGCTCTATA
CGATTTCCACGCTGTATCACAGCTTGCGCGGTCCGGCCAAGAATGTGTTCCAGCGGCTTGATTATTGCGCGATCTATCTG
TTGATTGCGGGCAGCTATACGCCGTTTGCGCTGGTTACGTTGCGTGGGACGTGGGGATGGACGTTATTCGGGATCAACTG
GGGACTCGCTGTAATTGGCATCGTGCAGGAGCTCTGGATCGGGCGGCGCACACGCGTGCTGTCTCTGCTGATCTATGTGG
TGATGGGGTGGCTGGTGGTGATTGCGTTTCAGCCGCTGGCCGCAGCGTTGCCTGCGGCCGGTCTTTGGTGGCTGGTAGCG
GGCGGAGCGCTCTATACGGCCGGAATCGGCTTCTTCCTGTTCGACGAAAAGGTGAAGCACTTCCATGGCATCTGGCACCT
GTTCGTGCTGGCCGGCAGTGCATGCCAGTTCGTCAGCATCCTCGGGTACGTCGGATAA

Upstream 100 bases:

>100_bases
TGCGGTGGTCGCTTGCGGCAGCCGTGCCAGAATATGGCTTCGCGCATCCGCGATCGCAACGCGGATCGCGAACCGACTGA
GTTCTTCCGGAGGACGGCGC

Downstream 100 bases:

>100_bases
ACGGGAGCTGGCGGATCTAGTAGACGTCGCGGCGATAGCGACCCTGCTCGGTCAGCCGGCGCAAACCCGCCTCGCCAAGC
ACATCGGCCAGCGCGTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MYRGERFNGYSHLAGAILAAAGMAVLVTSSALYHDAWKVVSSVVYGTTLVLLYTISTLYHSLRGPAKNVFQRLDYCAIYL
LIAGSYTPFALVTLRGTWGWTLFGINWGLAVIGIVQELWIGRRTRVLSLLIYVVMGWLVVIAFQPLAAALPAAGLWWLVA
GGALYTAGIGFFLFDEKVKHFHGIWHLFVLAGSACQFVSILGYVG

Sequences:

>Translated_205_residues
MYRGERFNGYSHLAGAILAAAGMAVLVTSSALYHDAWKVVSSVVYGTTLVLLYTISTLYHSLRGPAKNVFQRLDYCAIYL
LIAGSYTPFALVTLRGTWGWTLFGINWGLAVIGIVQELWIGRRTRVLSLLIYVVMGWLVVIAFQPLAAALPAAGLWWLVA
GGALYTAGIGFFLFDEKVKHFHGIWHLFVLAGSACQFVSILGYVG
>Mature_205_residues
MYRGERFNGYSHLAGAILAAAGMAVLVTSSALYHDAWKVVSSVVYGTTLVLLYTISTLYHSLRGPAKNVFQRLDYCAIYL
LIAGSYTPFALVTLRGTWGWTLFGINWGLAVIGIVQELWIGRRTRVLSLLIYVVMGWLVVIAFQPLAAALPAAGLWWLVA
GGALYTAGIGFFLFDEKVKHFHGIWHLFVLAGSACQFVSILGYVG

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=185, Percent_Identity=30.2702702702703, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI154759277, Length=209, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI52630445, Length=208, Percent_Identity=27.8846153846154, Blast_Score=72, Evalue=3e-13,
Organism=Escherichia coli, GI1789266, Length=203, Percent_Identity=38.9162561576355, Blast_Score=131, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI71996356, Length=210, Percent_Identity=30, Blast_Score=81, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24640324, Length=214, Percent_Identity=31.7757009345794, Blast_Score=73, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 22468; Mature: 22468

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRGERFNGYSHLAGAILAAAGMAVLVTSSALYHDAWKVVSSVVYGTTLVLLYTISTLYH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRGPAKNVFQRLDYCAIYLLIAGSYTPFALVTLRGTWGWTLFGINWGLAVIGIVQELWI
HHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHC
GRRTRVLSLLIYVVMGWLVVIAFQPLAAALPAAGLWWLVAGGALYTAGIGFFLFDEKVKH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FHGIWHLFVLAGSACQFVSILGYVG
HHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MYRGERFNGYSHLAGAILAAAGMAVLVTSSALYHDAWKVVSSVVYGTTLVLLYTISTLYH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRGPAKNVFQRLDYCAIYLLIAGSYTPFALVTLRGTWGWTLFGINWGLAVIGIVQELWI
HHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHC
GRRTRVLSLLIYVVMGWLVVIAFQPLAAALPAAGLWWLVAGGALYTAGIGFFLFDEKVKH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FHGIWHLFVLAGSACQFVSILGYVG
HHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]