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The map label for this gene is ymdC [H]

Identifier: 73539025

GI number: 73539025

Start: 1947787

End: 1949595

Strand: Reverse

Name: ymdC [H]

Synonym: Reut_B5202

Alternate gene names: 73539025

Gene position: 1949595-1947787 (Counterclockwise)

Preceding gene: 73539032

Following gene: 73539024

Centisome position: 71.51

GC content: 66.33

Gene sequence:

>1809_bases
ATGCACGAGCCCTGCAATGTGAGCGTGTCGTCGGTGACCCGTCATGGCCGCTCACGGCATGCGTGGCGCGCGGCCTGGCG
GCGCGCGGCCTCGCTGGTGACAACGCTGTTTTGCGCCGGTGTGCTGGCGGGTTGCGCGAGCCTGCCAGCGTCGGCCGAAC
GTACGCCTTCGACGGCGCCAACCGATACCAGCGACACGCCACTCGGCAAGGCGCTCGCGCCCAGGCTGGCGCAGCATCCG
GGCGATTCGCTGTTCTATCCGCTATCGTCCGGTCCCGACGCGCTGGCCGCACGACTGGCCATGGCGCGGGCGGCGCAGCG
CAGCCTGGACCTGCAGACCTATATTTTCGAGCCTACCGGCACCGGCGCTGCCGTGCTCGGCGACATCATCAACGCCGCCG
ACCGCGGGGTGCGCGTGCGGCTGTTGCTGGATGACATGCATACCGGTGGCCTGGACAAGGTGCTGGCCGCGATCGACTCG
CATCCCAATATCGAGGTCAGGCTGTTCAACCCGTTCGCGAACCGGGGCGCGCGCTGGCTGGAAATGCTGTGGAGCTTCAG
CCGGCTGGACCGCCGCATGCACAACAAGTCGATGACGGTGGACAACCAGATCTCGCTGGTTGGCGGGCGCAATGTGGGCG
ATGCCTATTTCTCCGCGCGTGCCGACATGGACTTCAGCGATCTGGACGTGCTTGTCGCGGGACCGGTCGTGCCGCAGGTG
TCCGCGGTGTTCGATGCTTACTGGAACGATCCGTCGTCCTACCCCGTGGCCGCGCTGATTCCCGAAGGCAAGGATGCGCC
CGAAGAAATGCGCGCGTTGCGTAAGCGCCTCGAAGCGCGCGGCGAGCAGGCGCGCGCCAGCCCCTATGTGCAGGAACTGC
TTGATTCGGGTCTGGCGAAAGGTATCGAAAGCGGCCACATGCCCGGCTACACGGGCAAGGCCACCGTGGTGTCGGACAGC
GCGTCCAAGGCTACCGGGAAGACCGAGGGCGATGGCTATGCCACGGTGCGGCTGGAGCACATGATCAGTGCGGCGAAGAA
CGAAGTGGTGCTGGTATCGCCGTACTTCGTGCCGGACGATGACGGCGAAGCGTGGCTTGTCGCGCTTGCCCGTCGCGGCA
TTCACGTGCGCATCCTGACCAATTCGTTCGCGGCCAACGACGTGAGCGCCGTGCACGCCGGCTACATGCCTCACCGCGAG
GCGCTGGTGGCGGCCGGCATCGAACTGTACGAGCTCAAGCCGAGTGCCTACGCGGAACTCGCCCAGCGCGGCAAGCCGGC
CGAATCGGGATCGGGAACGGGCGCGGGAACGCGCGCTGGCGCGGGGACGGGTTCGGGATCGGGGACGGGGACGGGGACGG
GGACGGGGACGGGGACGGGTTCGGGATCCGGATTGGGCTCGGGGTCCGGGTCGAGAGTGACTTCGGGCTCGAGCTCGGGT
TCGCGTTCATGGCTTGCGTCGAGCCGCGCCAGCCTGCATGCCAAAAACTACATCGTCGACCAGCATCTTGTATTCATCGG
TTCGCTCAACATGGATCAGCGTTCGGCCAAGCTGAATACCGAGATGGGCATCGTCCTGGATAGCGCGCCGCTGGCCCAGC
GCATCCTCAAGGGCATGAATGATGGCTTGCTCGACATCGCCTACCGGGTCGAACTGCGTGCGAACCCGGACGGGAGCTCG
CGCCATCTGACGTGGGTCACGCGCGAGAGCGGCCAGTTGAAAACCTACGACAGTGAGCCGGGGATGGGCCCGCTGCAACA
CCTTGGCATCGGCTTCCTGCGCGTGCTGCCGATCAAGGAAGAGTTGTAG

Upstream 100 bases:

>100_bases
GGCGATGCCTTCGCGGGCGCGTGGCGGTGTATCTTTAAAGGTATCTGACCTTTAGGCCGCCCGGGCAGCCGGTGCTGGGG
GGCGCAGCGGAGAGACGCGA

Downstream 100 bases:

>100_bases
ACGCGCATAAGCGGGAGGCCGTTGCTGCACAGCGTCTTACGTGAATCTCCGATCGGCGGTAATGTGCGGGCTGCGCCCCG
GAACCCACTGACGGCCGCCC

Product: phospholipase D/transphosphatidylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MHEPCNVSVSSVTRHGRSRHAWRAAWRRAASLVTTLFCAGVLAGCASLPASAERTPSTAPTDTSDTPLGKALAPRLAQHP
GDSLFYPLSSGPDALAARLAMARAAQRSLDLQTYIFEPTGTGAAVLGDIINAADRGVRVRLLLDDMHTGGLDKVLAAIDS
HPNIEVRLFNPFANRGARWLEMLWSFSRLDRRMHNKSMTVDNQISLVGGRNVGDAYFSARADMDFSDLDVLVAGPVVPQV
SAVFDAYWNDPSSYPVAALIPEGKDAPEEMRALRKRLEARGEQARASPYVQELLDSGLAKGIESGHMPGYTGKATVVSDS
ASKATGKTEGDGYATVRLEHMISAAKNEVVLVSPYFVPDDDGEAWLVALARRGIHVRILTNSFAANDVSAVHAGYMPHRE
ALVAAGIELYELKPSAYAELAQRGKPAESGSGTGAGTRAGAGTGSGSGTGTGTGTGTGTGSGSGLGSGSGSRVTSGSSSG
SRSWLASSRASLHAKNYIVDQHLVFIGSLNMDQRSAKLNTEMGIVLDSAPLAQRILKGMNDGLLDIAYRVELRANPDGSS
RHLTWVTRESGQLKTYDSEPGMGPLQHLGIGFLRVLPIKEEL

Sequences:

>Translated_602_residues
MHEPCNVSVSSVTRHGRSRHAWRAAWRRAASLVTTLFCAGVLAGCASLPASAERTPSTAPTDTSDTPLGKALAPRLAQHP
GDSLFYPLSSGPDALAARLAMARAAQRSLDLQTYIFEPTGTGAAVLGDIINAADRGVRVRLLLDDMHTGGLDKVLAAIDS
HPNIEVRLFNPFANRGARWLEMLWSFSRLDRRMHNKSMTVDNQISLVGGRNVGDAYFSARADMDFSDLDVLVAGPVVPQV
SAVFDAYWNDPSSYPVAALIPEGKDAPEEMRALRKRLEARGEQARASPYVQELLDSGLAKGIESGHMPGYTGKATVVSDS
ASKATGKTEGDGYATVRLEHMISAAKNEVVLVSPYFVPDDDGEAWLVALARRGIHVRILTNSFAANDVSAVHAGYMPHRE
ALVAAGIELYELKPSAYAELAQRGKPAESGSGTGAGTRAGAGTGSGSGTGTGTGTGTGTGSGSGLGSGSGSRVTSGSSSG
SRSWLASSRASLHAKNYIVDQHLVFIGSLNMDQRSAKLNTEMGIVLDSAPLAQRILKGMNDGLLDIAYRVELRANPDGSS
RHLTWVTRESGQLKTYDSEPGMGPLQHLGIGFLRVLPIKEEL
>Mature_602_residues
MHEPCNVSVSSVTRHGRSRHAWRAAWRRAASLVTTLFCAGVLAGCASLPASAERTPSTAPTDTSDTPLGKALAPRLAQHP
GDSLFYPLSSGPDALAARLAMARAAQRSLDLQTYIFEPTGTGAAVLGDIINAADRGVRVRLLLDDMHTGGLDKVLAAIDS
HPNIEVRLFNPFANRGARWLEMLWSFSRLDRRMHNKSMTVDNQISLVGGRNVGDAYFSARADMDFSDLDVLVAGPVVPQV
SAVFDAYWNDPSSYPVAALIPEGKDAPEEMRALRKRLEARGEQARASPYVQELLDSGLAKGIESGHMPGYTGKATVVSDS
ASKATGKTEGDGYATVRLEHMISAAKNEVVLVSPYFVPDDDGEAWLVALARRGIHVRILTNSFAANDVSAVHAGYMPHRE
ALVAAGIELYELKPSAYAELAQRGKPAESGSGTGAGTRAGAGTGSGSGTGTGTGTGTGTGSGSGLGSGSGSRVTSGSSSG
SRSWLASSRASLHAKNYIVDQHLVFIGSLNMDQRSAKLNTEMGIVLDSAPLAQRILKGMNDGLLDIAYRVELRANPDGSS
RHLTWVTRESGQLKTYDSEPGMGPLQHLGIGFLRVLPIKEEL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=533, Percent_Identity=37.3358348968105, Blast_Score=306, Evalue=3e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63715; Mature: 63715

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS00014 ER_TARGET ; PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEPCNVSVSSVTRHGRSRHAWRAAWRRAASLVTTLFCAGVLAGCASLPASAERTPSTAP
CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TDTSDTPLGKALAPRLAQHPGDSLFYPLSSGPDALAARLAMARAAQRSLDLQTYIFEPTG
CCCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC
TGAAVLGDIINAADRGVRVRLLLDDMHTGGLDKVLAAIDSHPNIEVRLFNPFANRGARWL
CCHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCHHHCHHHHH
EMLWSFSRLDRRMHNKSMTVDNQISLVGGRNVGDAYFSARADMDFSDLDVLVAGPVVPQV
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCEEEECCCCHHH
SAVFDAYWNDPSSYPVAALIPEGKDAPEEMRALRKRLEARGEQARASPYVQELLDSGLAK
HHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHH
GIESGHMPGYTGKATVVSDSASKATGKTEGDGYATVRLEHMISAAKNEVVLVSPYFVPDD
HHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEECEECCCC
DGEAWLVALARRGIHVRILTNSFAANDVSAVHAGYMPHREALVAAGIELYELKPSAYAEL
CCCHHHHHHHHCCEEEEEEECCCCCCCHHHHHCCCCCCHHHHHHCCCEEEEECCHHHHHH
AQRGKPAESGSGTGAGTRAGAGTGSGSGTGTGTGTGTGTGSGSGLGSGSGSRVTSGSSSG
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
SRSWLASSRASLHAKNYIVDQHLVFIGSLNMDQRSAKLNTEMGIVLDSAPLAQRILKGMN
CHHHHHHHHHHHHHHHEEECCEEEEEECCCCCHHHHHCCCCEEEEECCCHHHHHHHHHCC
DGLLDIAYRVELRANPDGSSRHLTWVTRESGQLKTYDSEPGMGPLQHLGIGFLRVLPIKE
CCCEEEEEEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCCCHHHHHCCCCEEEECCCC
EL
CC
>Mature Secondary Structure
MHEPCNVSVSSVTRHGRSRHAWRAAWRRAASLVTTLFCAGVLAGCASLPASAERTPSTAP
CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TDTSDTPLGKALAPRLAQHPGDSLFYPLSSGPDALAARLAMARAAQRSLDLQTYIFEPTG
CCCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC
TGAAVLGDIINAADRGVRVRLLLDDMHTGGLDKVLAAIDSHPNIEVRLFNPFANRGARWL
CCHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCHHHCHHHHH
EMLWSFSRLDRRMHNKSMTVDNQISLVGGRNVGDAYFSARADMDFSDLDVLVAGPVVPQV
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCEEEECCCCHHH
SAVFDAYWNDPSSYPVAALIPEGKDAPEEMRALRKRLEARGEQARASPYVQELLDSGLAK
HHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHH
GIESGHMPGYTGKATVVSDSASKATGKTEGDGYATVRLEHMISAAKNEVVLVSPYFVPDD
HHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEECEECCCC
DGEAWLVALARRGIHVRILTNSFAANDVSAVHAGYMPHREALVAAGIELYELKPSAYAEL
CCCHHHHHHHHCCEEEEEEECCCCCCCHHHHHCCCCCCHHHHHHCCCEEEEECCHHHHHH
AQRGKPAESGSGTGAGTRAGAGTGSGSGTGTGTGTGTGTGSGSGLGSGSGSRVTSGSSSG
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
SRSWLASSRASLHAKNYIVDQHLVFIGSLNMDQRSAKLNTEMGIVLDSAPLAQRILKGMN
CHHHHHHHHHHHHHHHEEECCEEEEEECCCCCHHHHHCCCCEEEEECCCHHHHHHHHHCC
DGLLDIAYRVELRANPDGSSRHLTWVTRESGQLKTYDSEPGMGPLQHLGIGFLRVLPIKE
CCCEEEEEEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCCCHHHHHCCCCEEEECCCC
EL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]