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The map label for this gene is ydfF [H]

Identifier: 73539020

GI number: 73539020

Start: 1943127

End: 1943816

Strand: Direct

Name: ydfF [H]

Synonym: Reut_B5197

Alternate gene names: 73539020

Gene position: 1943127-1943816 (Clockwise)

Preceding gene: 73539019

Following gene: 73539021

Centisome position: 71.28

GC content: 72.17

Gene sequence:

>690_bases
ATGGAATACACTCCAGGCATCAGCCAGCTCGCCGGCCTGCTGGCAGATCCCGGCCGTGCGGCCATGCTATGGGCGCTGAT
GGACGGCAGCGCCCGCCCCGCCGGGGAACTGGCGCTGATCGCTGGCCTGTCCGCCTCATCCGCGAGCGGACATCTGACGC
GGCTCAGTGAAGGCGGGCTGCTCGCCGTGGAGACGCGCGGGCGCAATCGCTACTATCGGCTGGCGGCGCCCGAGATCGGC
GTGGCGATTGAAGCGCTGGCTTCCGCCTCGCTCGCGAGCCGGCCGCCGCGGCTGCGTGATGTGCCGGTGTCGCGCGCGGC
GCCGCCTGCGTTGCGGCAGGCACGCACTTGCTACGATCATCTGGCTGGCGAACTCGCCGTTGGCCTGTTCGAGCGCATGA
CGCGCGCCGGCTGGCTGCTCGTGAACGGCAATGCCGTGGACCTCAGCGGCGACGGCGCGCAAGCCATGTCGCGGCTTGGC
GTCAACGTCGAGGCCGCGCGCCGCAAGCGGCGCCAGTTCGCGTGCACCTGCCCCGACTGGAGCGAGCGCAAGCCGCATCT
CGGCGGCGCACTCGGTGCCGCGCTGCTCGGCAACCTGCTTGAACGCGGCTGGATCGAGGCGACGCCCGCGTCGCGCGCGC
TGCGGGTGACGCCGCTCGGCCAGCGAGAAATCGGCGGCATCGCGGCCTGA

Upstream 100 bases:

>100_bases
AGAACAGGGTTTTGATGTGCAAGCAGGACATTAATGTCCGAGATCACGCCGACTGCAAATCCCTCTATACTCCATTCCAT
CATTCATCCCCCTATGAATC

Downstream 100 bases:

>100_bases
AGGCCCCGCAACACAGACATACCCAATACAGACATACCCAATAAGGAGAACGAACATGGTCACACCATTGGACGACCACA
TCCAGGACGCCATCCAGCGC

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MEYTPGISQLAGLLADPGRAAMLWALMDGSARPAGELALIAGLSASSASGHLTRLSEGGLLAVETRGRNRYYRLAAPEIG
VAIEALASASLASRPPRLRDVPVSRAAPPALRQARTCYDHLAGELAVGLFERMTRAGWLLVNGNAVDLSGDGAQAMSRLG
VNVEAARRKRRQFACTCPDWSERKPHLGGALGAALLGNLLERGWIEATPASRALRVTPLGQREIGGIAA

Sequences:

>Translated_229_residues
MEYTPGISQLAGLLADPGRAAMLWALMDGSARPAGELALIAGLSASSASGHLTRLSEGGLLAVETRGRNRYYRLAAPEIG
VAIEALASASLASRPPRLRDVPVSRAAPPALRQARTCYDHLAGELAVGLFERMTRAGWLLVNGNAVDLSGDGAQAMSRLG
VNVEAARRKRRQFACTCPDWSERKPHLGGALGAALLGNLLERGWIEATPASRALRVTPLGQREIGGIAA
>Mature_229_residues
MEYTPGISQLAGLLADPGRAAMLWALMDGSARPAGELALIAGLSASSASGHLTRLSEGGLLAVETRGRNRYYRLAAPEIG
VAIEALASASLASRPPRLRDVPVSRAAPPALRQARTCYDHLAGELAVGLFERMTRAGWLLVNGNAVDLSGDGAQAMSRLG
VNVEAARRKRRQFACTCPDWSERKPHLGGALGAALLGNLLERGWIEATPASRALRVTPLGQREIGGIAA

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 24052; Mature: 24052

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYTPGISQLAGLLADPGRAAMLWALMDGSARPAGELALIAGLSASSASGHLTRLSEGGL
CCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEECCCCE
LAVETRGRNRYYRLAAPEIGVAIEALASASLASRPPRLRDVPVSRAAPPALRQARTCYDH
EEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LAGELAVGLFERMTRAGWLLVNGNAVDLSGDGAQAMSRLGVNVEAARRKRRQFACTCPDW
HHHHHHHHHHHHHHHCCEEEECCCEEEECCCHHHHHHHHCCCHHHHHHHHHCEEECCCCC
SERKPHLGGALGAALLGNLLERGWIEATPASRALRVTPLGQREIGGIAA
CCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MEYTPGISQLAGLLADPGRAAMLWALMDGSARPAGELALIAGLSASSASGHLTRLSEGGL
CCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEECCCCE
LAVETRGRNRYYRLAAPEIGVAIEALASASLASRPPRLRDVPVSRAAPPALRQARTCYDH
EEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LAGELAVGLFERMTRAGWLLVNGNAVDLSGDGAQAMSRLGVNVEAARRKRRQFACTCPDW
HHHHHHHHHHHHHHHCCEEEECCCEEEECCCHHHHHHHHCCCHHHHHHHHHCEEECCCCC
SERKPHLGGALGAALLGNLLERGWIEATPASRALRVTPLGQREIGGIAA
CCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]