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The map label for this gene is ydhJ [C]

Identifier: 73538995

GI number: 73538995

Start: 1911790

End: 1912977

Strand: Reverse

Name: ydhJ [C]

Synonym: Reut_B5171

Alternate gene names: 73538995

Gene position: 1912977-1911790 (Counterclockwise)

Preceding gene: 73538996

Following gene: 73538994

Centisome position: 70.17

GC content: 64.23

Gene sequence:

>1188_bases
ATGCGGTGGTCAAGAGTCAAGACGTTCCTGATGGCGGGTGCTGCCATGATTGCGGCAGGCCTTGGCTATCTGCTGATGCC
AGAGCCGGTGGAAGTGGAGGTGGTCAAGCCGTCCGTTGGTGCGATGGCAGTCATCACAACCGAGGAGGGAGAGACCCGCA
GCAGGGAACGCTACGTTGTTGCCGCACCTGTCGCAGGAAGGCTAATGCGGATCAGCTTGCGGGAGGGCGACTGGGTGCAT
GAAGGGGAAGTGGTGGCAGAACTCGCGCCCCTGCCGCTCACGGCCCAGGAACGCGAAGAAGCCCAAGCACGGGTGGCTGC
GGCGCGTGCGGCATACCGTGAGGCGCAAGAGCGCGTCCGGCATGCCGCCGAAGACCACGCTCAGGCGCAGCGCGAACTGC
AGCGTGTCGAGAGGCTGGTGCGGGAGCGCTTCCTGTCTCCCCAGGCAGGGGAGCAGGCCGCCAACGCCACCATTACCGCC
GGCAATGATCTCGCCGCGGCGCGCGCCCGCGCCAGCACCGCCTTGCAGGAGGTCCGCGTGGCAGAAGCCGGCCTGCTGGC
CATCGAGGAGCACAAACGGGGGCGCTGGCCGGTCGTGTCGGTTCATGCACCGTTCACCGGAGCCGTATTATCCATTCCGG
AGCGCAGCGAGCGGGTTGTCGCTGCGGGCGAGCCCTTGCTGACGATCGGCAATCCACACGACTTGGAGATCGTGGTCGAA
CTACTGTCAACGGAAGCAGTCAAGGTGCGGCCGCAGATGCCGGCGCGCCTGGAAGGATGGGGCGGCGAGCAAGCGGTACA
AGGCAAGGTTCGGCTCGTGGAGCCCCATGCGTTCACCAAGGTATCCGCACTGGGCATAGAAGAAAAGCGGACCCGGGTGA
TTATCGACGTTATTGATCCACCCTCTGGGCTGGGCGACGGATTTCGCGTCATAGCGAGCGTTGTGCTGTGGCAGACCGAT
CACGCGACAAAGTTGCCCGCGAGTTCGCTGTACCGTTGCGGCGGTGCCCAATGGTGTGTGTTTCGGCTTGAGGGCGACCG
GGTGCGCAGGACGGAGGTCAGGATTGGTCACCGGAATTCGGATGAGGTGGAACTGCTTTCTCCCTTGACCGGCGGCGTAC
AAGTAGTTCGATACCCGCAAAGCAGCCTTCAGGATGGCCAGCGGGTAAAGCTGCGTACCGACCCCTAG

Upstream 100 bases:

>100_bases
CTGCCGGCCATCGGCGCCGCGGCCGTGGCGGCACTGCTTGTCCAGCAGCGGCTGCGACGGCTGGACCTGATCGCAGTGCT
GAAAACCAGAGAGTAAGGCG

Downstream 100 bases:

>100_bases
TCCATTGTGTCGGTCGAAATGCACCCCGAATCGACTGCGCCCCTAGGTTACATGCCATGTCGCCGATGTTCGCAACGGCC
GCGCCGTTGCCGCGGATGGC

Product: secretion protein HlyD

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD; HlyD Family Secretion Protein; Multidrug Resistance Efflux Pump-Like Protein; Membrane Fusion Protein AcrA; Membrane Fusion Protein

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MRWSRVKTFLMAGAAMIAAGLGYLLMPEPVEVEVVKPSVGAMAVITTEEGETRSRERYVVAAPVAGRLMRISLREGDWVH
EGEVVAELAPLPLTAQEREEAQARVAAARAAYREAQERVRHAAEDHAQAQRELQRVERLVRERFLSPQAGEQAANATITA
GNDLAAARARASTALQEVRVAEAGLLAIEEHKRGRWPVVSVHAPFTGAVLSIPERSERVVAAGEPLLTIGNPHDLEIVVE
LLSTEAVKVRPQMPARLEGWGGEQAVQGKVRLVEPHAFTKVSALGIEEKRTRVIIDVIDPPSGLGDGFRVIASVVLWQTD
HATKLPASSLYRCGGAQWCVFRLEGDRVRRTEVRIGHRNSDEVELLSPLTGGVQVVRYPQSSLQDGQRVKLRTDP

Sequences:

>Translated_395_residues
MRWSRVKTFLMAGAAMIAAGLGYLLMPEPVEVEVVKPSVGAMAVITTEEGETRSRERYVVAAPVAGRLMRISLREGDWVH
EGEVVAELAPLPLTAQEREEAQARVAAARAAYREAQERVRHAAEDHAQAQRELQRVERLVRERFLSPQAGEQAANATITA
GNDLAAARARASTALQEVRVAEAGLLAIEEHKRGRWPVVSVHAPFTGAVLSIPERSERVVAAGEPLLTIGNPHDLEIVVE
LLSTEAVKVRPQMPARLEGWGGEQAVQGKVRLVEPHAFTKVSALGIEEKRTRVIIDVIDPPSGLGDGFRVIASVVLWQTD
HATKLPASSLYRCGGAQWCVFRLEGDRVRRTEVRIGHRNSDEVELLSPLTGGVQVVRYPQSSLQDGQRVKLRTDP
>Mature_395_residues
MRWSRVKTFLMAGAAMIAAGLGYLLMPEPVEVEVVKPSVGAMAVITTEEGETRSRERYVVAAPVAGRLMRISLREGDWVH
EGEVVAELAPLPLTAQEREEAQARVAAARAAYREAQERVRHAAEDHAQAQRELQRVERLVRERFLSPQAGEQAANATITA
GNDLAAARARASTALQEVRVAEAGLLAIEEHKRGRWPVVSVHAPFTGAVLSIPERSERVVAAGEPLLTIGNPHDLEIVVE
LLSTEAVKVRPQMPARLEGWGGEQAVQGKVRLVEPHAFTKVSALGIEEKRTRVIIDVIDPPSGLGDGFRVIASVVLWQTD
HATKLPASSLYRCGGAQWCVFRLEGDRVRRTEVRIGHRNSDEVELLSPLTGGVQVVRYPQSSLQDGQRVKLRTDP

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43242; Mature: 43242

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWSRVKTFLMAGAAMIAAGLGYLLMPEPVEVEVVKPSVGAMAVITTEEGETRSRERYVV
CCHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCEEE
AAPVAGRLMRISLREGDWVHEGEVVAELAPLPLTAQEREEAQARVAAARAAYREAQERVR
ECCCCCEEEEEEECCCCCEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HAAEDHAQAQRELQRVERLVRERFLSPQAGEQAANATITAGNDLAAARARASTALQEVRV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCEEEECCCCHHHHHHHHHHHHHHHHH
AEAGLLAIEEHKRGRWPVVSVHAPFTGAVLSIPERSERVVAAGEPLLTIGNPHDLEIVVE
HHHCEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCEEEECCCCEEEECCCCCHHHHHH
LLSTEAVKVRPQMPARLEGWGGEQAVQGKVRLVEPHAFTKVSALGIEEKRTRVIIDVIDP
HHCCCCEEECCCCCCCCCCCCCCCEECCCEEEECCCCHHEEHHCCCCCCCCEEEEEEECC
PSGLGDGFRVIASVVLWQTDHATKLPASSLYRCGGAQWCVFRLEGDRVRRTEVRIGHRNS
CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEEECCCEEEEEEEEECCCCC
DEVELLSPLTGGVQVVRYPQSSLQDGQRVKLRTDP
CCEEEECCCCCCEEEEECCCHHCCCCCEEEEECCC
>Mature Secondary Structure
MRWSRVKTFLMAGAAMIAAGLGYLLMPEPVEVEVVKPSVGAMAVITTEEGETRSRERYVV
CCHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCEEE
AAPVAGRLMRISLREGDWVHEGEVVAELAPLPLTAQEREEAQARVAAARAAYREAQERVR
ECCCCCEEEEEEECCCCCEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HAAEDHAQAQRELQRVERLVRERFLSPQAGEQAANATITAGNDLAAARARASTALQEVRV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCEEEECCCCHHHHHHHHHHHHHHHHH
AEAGLLAIEEHKRGRWPVVSVHAPFTGAVLSIPERSERVVAAGEPLLTIGNPHDLEIVVE
HHHCEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCEEEECCCCEEEECCCCCHHHHHH
LLSTEAVKVRPQMPARLEGWGGEQAVQGKVRLVEPHAFTKVSALGIEEKRTRVIIDVIDP
HHCCCCEEECCCCCCCCCCCCCCCEECCCEEEECCCCHHEEHHCCCCCCCCEEEEEEECC
PSGLGDGFRVIASVVLWQTDHATKLPASSLYRCGGAQWCVFRLEGDRVRRTEVRIGHRNS
CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEEECCCEEEEEEEEECCCCC
DEVELLSPLTGGVQVVRYPQSSLQDGQRVKLRTDP
CCEEEECCCCCCEEEEECCCHHCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA