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The map label for this gene is ydfM [H]

Identifier: 73538994

GI number: 73538994

Start: 1910613

End: 1911524

Strand: Reverse

Name: ydfM [H]

Synonym: Reut_B5170

Alternate gene names: 73538994

Gene position: 1911524-1910613 (Counterclockwise)

Preceding gene: 73538995

Following gene: 73538991

Centisome position: 70.12

GC content: 58.44

Gene sequence:

>912_bases
ATGCAAAAGCAAGATGGATTGAGTCCTGACGCGGACGAAATGCCAGGGAGTCAGGCTGCGGCAAGACGAAGCACGCTCGT
GAGCGTCGCGGTCAATGTCGGCCTGACACTCGCCCAGGTTGCCGCCGGAATCTTTGCTGGCTCCCAGGCACTGGTGGCCG
ACGCCATTCACTCCCTTTCGGATCTGGTTTCGGATTTCGTTGTCCTGTATGCCAGCCACCATAGCAAGAAAGCGCCAAGC
GACTCCTATCATTATGGGCACCAGCGTTTCGAGACTGCTGCCTCGCTGATACTTGGACTTCTCTTGCTAGTTGTCGGCGT
CGGCATGCTGTCAAACGCCGTACTCAAGCTTGAACATCCGGATTCAATCCAGCCAGTACGAATAGTCGGGCTTTGGGTCG
CCCTGGGTGCGCTGGCAACCAAGGAATTGTTGTTTCGCTATATGCTCGCGATCGCCGAACGAGTCCGTTCGAGCATGCTG
GTTGCAAATGCCTGGCACGCTCGGTCGGATGCAGCATCTTCGCTGGTGGTGGCGCTGGGGATCCTGGGCAATACCCTGGG
TTACCACCTGCTGGATCCGATCGCGGCACTCGTGGTTGGCCTGATGGTGACAAGAATGGGCTGGCAGTTTTCCCGGAGTG
CCTTGCGGGACCTGATGGATCGTGCGATCGACGCGGAGACGGTAACGGCGATTCGAAATGCCATGCTGGAAACGCCAGGC
GTGCTCGGTGCGCACGATGTGCGGACCCGGAAGATGGGTGACATGATTCTCGTGGACGTCCACCTTGACATCAATGCAGC
GGCGAGCGTGAGACAGGGGCATGACATTGCGCTTGAGGCGAGACGGCGAGTGATGAGCCGCAAAGATGTCCTCAACGTCA
TGACGCACGTTGATCCGGTCGACGTGGCATGA

Upstream 100 bases:

>100_bases
GGCTGGTGGTCTCCCAAGGTTGCCGCCGCCGGCCCAGCTTGGTCAAGGTGTCGCGCAGGCGCTAATATTTGGCTTGTCGT
CGAATCACAAGGCACTGTCA

Downstream 100 bases:

>100_bases
AATCTTGTGGTCAACCGACCAAATGCACTTGGCGGAACTGGTATGAGGAATTGCGATTTTTTCTCACAGAGATAATCAGG
TGCATTTTCTCTTTAGTCCT

Product: cation efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MQKQDGLSPDADEMPGSQAAARRSTLVSVAVNVGLTLAQVAAGIFAGSQALVADAIHSLSDLVSDFVVLYASHHSKKAPS
DSYHYGHQRFETAASLILGLLLLVVGVGMLSNAVLKLEHPDSIQPVRIVGLWVALGALATKELLFRYMLAIAERVRSSML
VANAWHARSDAASSLVVALGILGNTLGYHLLDPIAALVVGLMVTRMGWQFSRSALRDLMDRAIDAETVTAIRNAMLETPG
VLGAHDVRTRKMGDMILVDVHLDINAAASVRQGHDIALEARRRVMSRKDVLNVMTHVDPVDVA

Sequences:

>Translated_303_residues
MQKQDGLSPDADEMPGSQAAARRSTLVSVAVNVGLTLAQVAAGIFAGSQALVADAIHSLSDLVSDFVVLYASHHSKKAPS
DSYHYGHQRFETAASLILGLLLLVVGVGMLSNAVLKLEHPDSIQPVRIVGLWVALGALATKELLFRYMLAIAERVRSSML
VANAWHARSDAASSLVVALGILGNTLGYHLLDPIAALVVGLMVTRMGWQFSRSALRDLMDRAIDAETVTAIRNAMLETPG
VLGAHDVRTRKMGDMILVDVHLDINAAASVRQGHDIALEARRRVMSRKDVLNVMTHVDPVDVA
>Mature_303_residues
MQKQDGLSPDADEMPGSQAAARRSTLVSVAVNVGLTLAQVAAGIFAGSQALVADAIHSLSDLVSDFVVLYASHHSKKAPS
DSYHYGHQRFETAASLILGLLLLVVGVGMLSNAVLKLEHPDSIQPVRIVGLWVALGALATKELLFRYMLAIAERVRSSML
VANAWHARSDAASSLVVALGILGNTLGYHLLDPIAALVVGLMVTRMGWQFSRSALRDLMDRAIDAETVTAIRNAMLETPG
VLGAHDVRTRKMGDMILVDVHLDINAAASVRQGHDIALEARRRVMSRKDVLNVMTHVDPVDVA

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=270, Percent_Identity=25.5555555555556, Blast_Score=94, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI115533508, Length=279, Percent_Identity=26.5232974910394, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115533506, Length=279, Percent_Identity=26.5232974910394, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6325032, Length=225, Percent_Identity=31.5555555555556, Blast_Score=118, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6323831, Length=231, Percent_Identity=30.7359307359307, Blast_Score=99, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 32475; Mature: 32475

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKQDGLSPDADEMPGSQAAARRSTLVSVAVNVGLTLAQVAAGIFAGSQALVADAIHSLS
CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DLVSDFVVLYASHHSKKAPSDSYHYGHQRFETAASLILGLLLLVVGVGMLSNAVLKLEHP
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC
DSIQPVRIVGLWVALGALATKELLFRYMLAIAERVRSSMLVANAWHARSDAASSLVVALG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGNTLGYHLLDPIAALVVGLMVTRMGWQFSRSALRDLMDRAIDAETVTAIRNAMLETPG
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
VLGAHDVRTRKMGDMILVDVHLDINAAASVRQGHDIALEARRRVMSRKDVLNVMTHVDPV
CCCCHHHHHHHCCCEEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
DVA
CCC
>Mature Secondary Structure
MQKQDGLSPDADEMPGSQAAARRSTLVSVAVNVGLTLAQVAAGIFAGSQALVADAIHSLS
CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DLVSDFVVLYASHHSKKAPSDSYHYGHQRFETAASLILGLLLLVVGVGMLSNAVLKLEHP
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC
DSIQPVRIVGLWVALGALATKELLFRYMLAIAERVRSSMLVANAWHARSDAASSLVVALG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGNTLGYHLLDPIAALVVGLMVTRMGWQFSRSALRDLMDRAIDAETVTAIRNAMLETPG
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
VLGAHDVRTRKMGDMILVDVHLDINAAASVRQGHDIALEARRRVMSRKDVLNVMTHVDPV
CCCCHHHHHHHCCCEEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
DVA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]