BacMap

Definition	Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence.
Accession	NC_007348
Length	2,726,152

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The map label for this gene is yxnA [H]

Identifier: 73538903

GI number: 73538903

Start: 1816603

End: 1817616

Strand: Reverse

Name: yxnA [H]

Synonym: Reut_B5078

Alternate gene names: 73538903

Gene position: 1817616-1816603 (Counterclockwise)

Preceding gene: 73538908

Following gene: 73538901

Centisome position: 66.67

GC content: 68.34

Gene sequence:

>1014_bases
ATGAAAGTCTCTCTGAAGAAAATCGGGTCGCAGGTCATCGTGCTGACTGGGGCCACCAGCGGTGTCGGCCTGGTTACTGC
GCGCAAGGCCGCGGCCATGGGCGCCCGGCTCGTGCTGGTAGCCCGCAGCGAGGATTCGCTGCACAAGCTGGCCGAGGAAC
TGCGGGAGAAGGGTGCCGAGGTCATTACCGTGACCGCCGACGTGGGCCGGCACGAAGATGTGGCGCGCGTGGCGCATGCC
GCCATCGAGCGCTTTGCCGGGTTCGATACGTGGGTCAACAATGCTGGCGTGACGATCTTCGGCCGCCATGCCGATGTGCC
GCTCGAAGACCAGCGGCGCCTGTTCGACACCAACTACTGGGGCACCGTGCACGGCTCGCTGGCCGCCGCGGCGCACCTGC
GCGAGCGTGGCGGCGCGATCATCAACATCGGCAGCGAGGCCTCCGACGGGCCGCTGCCGCTGCAAAGCGCATACGCGGCA
TCGCAGCATGCGATCAAGGGCTTCACCGATTCCCTGCGGCTGGAGCTGGAGCAGGAAATGGCGCCGATCAGCGTCACGCT
GATCAAGCCCGCCGGGCTGGAAACGCCGCTGGCCATGCATGCCAAGAACTTCCTGGACGTGGAGCCGCGCCTGCCGCCGC
CACTCTATGATCCGGCACTGGCCGCGGAGGCGATCCTCTTTGCCGCCGAGCATCCGCGCCGCGACCTGTTTGTCGGCGGG
GCGGCCAAGGCGTTCTCCGCGGCTGCCTATCACGCGCCGCGCACATTCGACCAGGTCATGCGCCGCTTCATGGGCCGCGC
GCAGCAGACCCGGCATCCCGCCGGCCCGCTGGAGGACAACACGCTGTACGGCGGCGGCAACGACCTGCAGGAACGCACGG
GCAACCGTGTCGCCTTGCAGTCATGCCCTTACACGACGAGTGCGCGCCATCCCGTGCTGACCACGGCGCTCGTTGTCGGC
GCGTCGGCCGCACTGGCCGCGGTGATGCAGGTTCGCCGCGGACGGCATGACTAG

Upstream 100 bases:

>100_bases
TGCGGGATAAAGGCCCTGCATATCGGTCGAGCGTCGCCGGCAGTGGGTCCCGGATGCCGGCGATCGTCGTTCCCTTGCCG
GGGCATCAGGAAGCAAGCAG

Downstream 100 bases:

>100_bases
GCCTGGCACGCATTGCCACCGTTGCCGGCCCTCAGCCGGCCCGGTACGCTTCAAGGCGGTTGTACAACGTCTTCAGGCTG
ATGCCGAGTGCCCGCGCGGC

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKVSLKKIGSQVIVLTGATSGVGLVTARKAAAMGARLVLVARSEDSLHKLAEELREKGAEVITVTADVGRHEDVARVAHA
AIERFAGFDTWVNNAGVTIFGRHADVPLEDQRRLFDTNYWGTVHGSLAAAAHLRERGGAIINIGSEASDGPLPLQSAYAA
SQHAIKGFTDSLRLELEQEMAPISVTLIKPAGLETPLAMHAKNFLDVEPRLPPPLYDPALAAEAILFAAEHPRRDLFVGG
AAKAFSAAAYHAPRTFDQVMRRFMGRAQQTRHPAGPLEDNTLYGGGNDLQERTGNRVALQSCPYTTSARHPVLTTALVVG
ASAALAAVMQVRRGRHD

Sequences:

>Translated_337_residues
MKVSLKKIGSQVIVLTGATSGVGLVTARKAAAMGARLVLVARSEDSLHKLAEELREKGAEVITVTADVGRHEDVARVAHA
AIERFAGFDTWVNNAGVTIFGRHADVPLEDQRRLFDTNYWGTVHGSLAAAAHLRERGGAIINIGSEASDGPLPLQSAYAA
SQHAIKGFTDSLRLELEQEMAPISVTLIKPAGLETPLAMHAKNFLDVEPRLPPPLYDPALAAEAILFAAEHPRRDLFVGG
AAKAFSAAAYHAPRTFDQVMRRFMGRAQQTRHPAGPLEDNTLYGGGNDLQERTGNRVALQSCPYTTSARHPVLTTALVVG
ASAALAAVMQVRRGRHD
>Mature_337_residues
MKVSLKKIGSQVIVLTGATSGVGLVTARKAAAMGARLVLVARSEDSLHKLAEELREKGAEVITVTADVGRHEDVARVAHA
AIERFAGFDTWVNNAGVTIFGRHADVPLEDQRRLFDTNYWGTVHGSLAAAAHLRERGGAIINIGSEASDGPLPLQSAYAA
SQHAIKGFTDSLRLELEQEMAPISVTLIKPAGLETPLAMHAKNFLDVEPRLPPPLYDPALAAEAILFAAEHPRRDLFVGG
AAKAFSAAAYHAPRTFDQVMRRFMGRAQQTRHPAGPLEDNTLYGGGNDLQERTGNRVALQSCPYTTSARHPVLTTALVVG
ASAALAAVMQVRRGRHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=197, Percent_Identity=36.0406091370558, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4503817, Length=190, Percent_Identity=31.0526315789474, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI7706318, Length=178, Percent_Identity=32.5842696629214, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI157739938, Length=183, Percent_Identity=30.6010928961749, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI109715829, Length=232, Percent_Identity=27.1551724137931, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI32455239, Length=201, Percent_Identity=31.8407960199005, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI5031765, Length=201, Percent_Identity=31.8407960199005, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI32483357, Length=195, Percent_Identity=29.2307692307692, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI4758504, Length=251, Percent_Identity=29.0836653386454, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI38348362, Length=178, Percent_Identity=30.3370786516854, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI83715985, Length=245, Percent_Identity=29.3877551020408, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI38424085, Length=178, Percent_Identity=30.3370786516854, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI40807363, Length=241, Percent_Identity=26.9709543568465, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI126723191, Length=171, Percent_Identity=28.6549707602339, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI150247226, Length=216, Percent_Identity=28.7037037037037, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=27.5132275132275, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI5031737, Length=192, Percent_Identity=27.0833333333333, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI40254986, Length=179, Percent_Identity=25.6983240223464, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI40548397, Length=201, Percent_Identity=28.3582089552239, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI214010158, Length=201, Percent_Identity=28.3582089552239, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI214010156, Length=201, Percent_Identity=28.3582089552239, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI22758144, Length=201, Percent_Identity=28.3582089552239, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1788459, Length=209, Percent_Identity=30.622009569378, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082100, Length=196, Percent_Identity=33.6734693877551, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787820, Length=182, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI2367365, Length=189, Percent_Identity=30.1587301587302, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI87082160, Length=187, Percent_Identity=28.8770053475936, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1787335, Length=191, Percent_Identity=29.3193717277487, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1787905, Length=138, Percent_Identity=26.0869565217391, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI71997402, Length=168, Percent_Identity=31.547619047619, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17544670, Length=255, Percent_Identity=24.3137254901961, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI193203117, Length=274, Percent_Identity=25.1824817518248, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17507613, Length=212, Percent_Identity=26.4150943396226, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI32563809, Length=212, Percent_Identity=26.4150943396226, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193203115, Length=275, Percent_Identity=25.0909090909091, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=174, Percent_Identity=28.1609195402299, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17570069, Length=174, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=196, Percent_Identity=29.5918367346939, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17564282, Length=274, Percent_Identity=23.3576642335766, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71994600, Length=177, Percent_Identity=28.8135593220339, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17562906, Length=258, Percent_Identity=24.8062015503876, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17560220, Length=256, Percent_Identity=24.609375, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI72000259, Length=254, Percent_Identity=24.8031496062992, Blast_Score=68, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17560676, Length=195, Percent_Identity=26.1538461538462, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193204405, Length=200, Percent_Identity=26.5, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=228, Percent_Identity=28.9473684210526, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24644339, Length=199, Percent_Identity=30.1507537688442, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI23397609, Length=192, Percent_Identity=30.7291666666667, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28571526, Length=201, Percent_Identity=30.3482587064677, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21357041, Length=167, Percent_Identity=31.7365269461078, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24580925, Length=208, Percent_Identity=28.3653846153846, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI28571387, Length=237, Percent_Identity=26.5822784810127, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281364494, Length=245, Percent_Identity=30.6122448979592, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21358495, Length=196, Percent_Identity=26.0204081632653, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI116007236, Length=197, Percent_Identity=29.4416243654822, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21356301, Length=190, Percent_Identity=27.3684210526316, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24648944, Length=233, Percent_Identity=27.4678111587983, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI17737361, Length=243, Percent_Identity=30.0411522633745, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24641232, Length=204, Percent_Identity=27.4509803921569, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI116007238, Length=207, Percent_Identity=27.536231884058, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24640442, Length=188, Percent_Identity=29.7872340425532, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24584752, Length=200, Percent_Identity=29.5, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36081; Mature: 36081

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSLKKIGSQVIVLTGATSGVGLVTARKAAAMGARLVLVARSEDSLHKLAEELREKGAE
CCCCHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCE
VITVTADVGRHEDVARVAHAAIERFAGFDTWVNNAGVTIFGRHADVPLEDQRRLFDTNYW
EEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCC
GTVHGSLAAAAHLRERGGAIINIGSEASDGPLPLQSAYAASQHAIKGFTDSLRLELEQEM
EEECHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCC
APISVTLIKPAGLETPLAMHAKNFLDVEPRLPPPLYDPALAAEAILFAAEHPRRDLFVGG
CCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECC
AAKAFSAAAYHAPRTFDQVMRRFMGRAQQTRHPAGPLEDNTLYGGGNDLQERTGNRVALQ
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHCCCEEEEE
SCPYTTSARHPVLTTALVVGASAALAAVMQVRRGRHD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKVSLKKIGSQVIVLTGATSGVGLVTARKAAAMGARLVLVARSEDSLHKLAEELREKGAE
CCCCHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCE
VITVTADVGRHEDVARVAHAAIERFAGFDTWVNNAGVTIFGRHADVPLEDQRRLFDTNYW
EEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCC
GTVHGSLAAAAHLRERGGAIINIGSEASDGPLPLQSAYAASQHAIKGFTDSLRLELEQEM
EEECHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCC
APISVTLIKPAGLETPLAMHAKNFLDVEPRLPPPLYDPALAAEAILFAAEHPRRDLFVGG
CCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECC
AAKAFSAAAYHAPRTFDQVMRRFMGRAQQTRHPAGPLEDNTLYGGGNDLQERTGNRVALQ
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHCCCEEEEE
SCPYTTSARHPVLTTALVVGASAALAAVMQVRRGRHD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]