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The map label for this gene is ssuC [H]

Identifier: 73538791

GI number: 73538791

Start: 1693765

End: 1694328

Strand: Reverse

Name: ssuC [H]

Synonym: Reut_B4966

Alternate gene names: 73538791

Gene position: 1694328-1693765 (Counterclockwise)

Preceding gene: 73538792

Following gene: 73538790

Centisome position: 62.15

GC content: 65.6

Gene sequence:

>564_bases
ATGGATATGCGCCGGCCGCATAAGGCCCAGCGATATCATTCCTTGACCCTGCCATTGCCCGTTCCCTGCAGTGCAAGGCT
CGTGCCCGCTGCGCAGTGCCATCCCGTCCTGCTGCCGCTGGCGCTGCTGTGGTTCGGCCTCGGCAGCAAGAGCCTGATCT
TTGTGCTGATCCACTCGGTGCTGTGGCCGCTCGCGCTCAATACCTATGCGGGATTTCGCAGCGTACCGGAGACGCTGCGC
ATGGCCGGGCGCAACTACGGGCTGCGCGGCGTGCGCTACGTGGTGCTGATCCTCGTGCCGGCTGCACTGCCCGCGATCCT
GTCGGGGCTGAAGATCGGCTGGGCCTTTGCCTGGCGCACGCTGATCGCGGCGGAGCTGGTGTTCGGCGCATCGTCGGGGC
AGGGCGGGTTGGGCTGGTTTATCTTCCAGAACCGCAACGAGCTTTACACGGACCGCGTATTCGCCGGCCTGGCTACGGTG
ATCCTGATCGGCTTGCTGGTCGAAGGGCTGGTGTTCACGACGCTGGAGCGGCTGACCGTGCGGCGCTGGGGCATGCAGCA
TTAG

Upstream 100 bases:

>100_bases
GCCAGCCAACCGGGTGCTGCACGCACTGGTAAGGCTGATCGAGGACAAGCAGCAACACGGCTGATTGCTGTCCAGATGTG
GGGGTGGCAAATGTCCCGAC

Downstream 100 bases:

>100_bases
TTGCCCTGTCCATCAAGCGGGAGTAGTGTACGGCTCCGATATCAACGGCCATCGCCACACTCATCGGAGTCCCGCATGAC
AGAGATCCACCACGCCGCCG

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MDMRRPHKAQRYHSLTLPLPVPCSARLVPAAQCHPVLLPLALLWFGLGSKSLIFVLIHSVLWPLALNTYAGFRSVPETLR
MAGRNYGLRGVRYVVLILVPAALPAILSGLKIGWAFAWRTLIAAELVFGASSGQGGLGWFIFQNRNELYTDRVFAGLATV
ILIGLLVEGLVFTTLERLTVRRWGMQH

Sequences:

>Translated_187_residues
MDMRRPHKAQRYHSLTLPLPVPCSARLVPAAQCHPVLLPLALLWFGLGSKSLIFVLIHSVLWPLALNTYAGFRSVPETLR
MAGRNYGLRGVRYVVLILVPAALPAILSGLKIGWAFAWRTLIAAELVFGASSGQGGLGWFIFQNRNELYTDRVFAGLATV
ILIGLLVEGLVFTTLERLTVRRWGMQH
>Mature_187_residues
MDMRRPHKAQRYHSLTLPLPVPCSARLVPAAQCHPVLLPLALLWFGLGSKSLIFVLIHSVLWPLALNTYAGFRSVPETLR
MAGRNYGLRGVRYVVLILVPAALPAILSGLKIGWAFAWRTLIAAELVFGASSGQGGLGWFIFQNRNELYTDRVFAGLATV
ILIGLLVEGLVFTTLERLTVRRWGMQH

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=148, Percent_Identity=33.7837837837838, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1786564, Length=118, Percent_Identity=37.2881355932203, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 20743; Mature: 20743

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMRRPHKAQRYHSLTLPLPVPCSARLVPAAQCHPVLLPLALLWFGLGSKSLIFVLIHSV
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
LWPLALNTYAGFRSVPETLRMAGRNYGLRGVRYVVLILVPAALPAILSGLKIGWAFAWRT
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIAAELVFGASSGQGGLGWFIFQNRNELYTDRVFAGLATVILIGLLVEGLVFTTLERLTV
HHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRWGMQH
HHCCCCC
>Mature Secondary Structure
MDMRRPHKAQRYHSLTLPLPVPCSARLVPAAQCHPVLLPLALLWFGLGSKSLIFVLIHSV
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
LWPLALNTYAGFRSVPETLRMAGRNYGLRGVRYVVLILVPAALPAILSGLKIGWAFAWRT
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIAAELVFGASSGQGGLGWFIFQNRNELYTDRVFAGLATVILIGLLVEGLVFTTLERLTV
HHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRWGMQH
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]