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The map label for this gene is ydaM [H]

Identifier: 73538774

GI number: 73538774

Start: 1676082

End: 1677422

Strand: Reverse

Name: ydaM [H]

Synonym: Reut_B4949

Alternate gene names: 73538774

Gene position: 1677422-1676082 (Counterclockwise)

Preceding gene: 73538775

Following gene: 73538773

Centisome position: 61.53

GC content: 65.85

Gene sequence:

>1341_bases
ATGGGAACCATGGACACCGTGTCGCTAGTCAACCACGTACTTCTCGCGGCCTCGCTGTGCATCATCGCGCTGCTGGTGAT
CTACACGGCGCGGCACTACGTGTTCACGCTGAATCGCCTGTTTGGCCGCCAGCGCCAGCCCTACCTCGATATCGAGCATG
GGGTATGGCCGCAGGTCGTGGTCTGCGTCGCCGCGCATAACGAAGAGCGCGTGATCGCGGATTGCCTGAACGCGCTGCTG
GAGGTCGACTATCCGCACGACAGAATGACGATCATGCCGGTCAACGACCGGTCCACAGACGGCACGCGGCAGATCATTGA
CGATATCGCGGCGAAGCATCCGGGCCGCTTCTCGTTGTTTCACCGCACCGAGGGGCGCCCCGGCAAGGCGGCGGCCTTGC
GCGACGCGACCGCGCTGATCGAGGCCGAGATCATGATCGTGTTCGACGCCGACTACCTGCCCGCGCGTGGCCTGATCAAG
CAGCTCGTGGCACCGTTTTTCGATCCGGAGGTCGGCGCGATCATGGGCCGCGTGGTGCCGGTCAACGCCGGTGCCAACCT
GCTGACGCGCCTGCTCGACCTGGAACGCGCGGGCGGCTACCAGGTCGACCAGACCGCGCGCATGAACCTCGGGCTGGTGC
CGCAATACGGCGGCACCGTGGGCGGCATTCGCTGCCGTGCGCTGGCCGAGATTGGGGGCTGGAATATCGACACGCTCGCC
GAAGACACCGATGTCACGTTCCGCCTGCTGCAGCGCGGCTGGAAGACGGTCTATCAGAACCGCTCCGAGTGCTATGAAGA
GGTGCCGGAGGTGTGGCCCGTGCGGGTCCGTCAGATCAGCCGCTGGTCGCGCGGTCACAACCAGGTGATGGTGAACAATA
TCTGGAAGCTGGTCACGAACCGGCGCATCAGCCTGCGCGAGCGGGTCGACGGCGCGCTGCTGTTGCTGATCTTCATCATG
CCGCCGATCCAGCTGCTCGGCTGGGTGATTGCCGCCATCCTGTTCTACATCGCGGCGCAGTCGATCGTGTCGGGCTGGGT
GTTCCTGACTGCGTTGCTTTGCTATGGCGGGCTGGGCAGCAATGCGGCGTTCTTCGAGATCGCTGCGGCCACCTACCTCG
ACGGCCACCGCAACCGCATCCGCCTGTTGCCGCTGAACCTGTTCGGCTTCCTGGTCAGCATGGTGGCGATCTCGCGCGCG
GCCCTCACGCAGATCGCCGACGCATGGCGCAAGCGCGAGCTGGTCTGGGACAAGACCGAACGCTTCCGTACGCCGGTCCC
GGGCGCCACCGGCGCCGTGCCGGCAGCCTCCGACACCAAACCGGGCGGAGAGGCGCGATGA

Upstream 100 bases:

>100_bases
TTCCTGCACGACCAGCAGGCGGCGGCGTGACCGCCATGACGCTTTCCGCTCCGGCCCGCCATGCCCGCCCTGCGGCGCAC
CACGGGGCGGCCGCATTCTG

Downstream 100 bases:

>100_bases
CGGCAAACTACTTCCTGCTCGCGGGCGCCGTGCTGGGCCTGTTGCTGCTGCCGTTCGTGCCCGCGCTTTCCGAATGGCTG
CGGCCGACCGACTTCGCGCC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MGTMDTVSLVNHVLLAASLCIIALLVIYTARHYVFTLNRLFGRQRQPYLDIEHGVWPQVVVCVAAHNEERVIADCLNALL
EVDYPHDRMTIMPVNDRSTDGTRQIIDDIAAKHPGRFSLFHRTEGRPGKAAALRDATALIEAEIMIVFDADYLPARGLIK
QLVAPFFDPEVGAIMGRVVPVNAGANLLTRLLDLERAGGYQVDQTARMNLGLVPQYGGTVGGIRCRALAEIGGWNIDTLA
EDTDVTFRLLQRGWKTVYQNRSECYEEVPEVWPVRVRQISRWSRGHNQVMVNNIWKLVTNRRISLRERVDGALLLLIFIM
PPIQLLGWVIAAILFYIAAQSIVSGWVFLTALLCYGGLGSNAAFFEIAAATYLDGHRNRIRLLPLNLFGFLVSMVAISRA
ALTQIADAWRKRELVWDKTERFRTPVPGATGAVPAASDTKPGGEAR

Sequences:

>Translated_446_residues
MGTMDTVSLVNHVLLAASLCIIALLVIYTARHYVFTLNRLFGRQRQPYLDIEHGVWPQVVVCVAAHNEERVIADCLNALL
EVDYPHDRMTIMPVNDRSTDGTRQIIDDIAAKHPGRFSLFHRTEGRPGKAAALRDATALIEAEIMIVFDADYLPARGLIK
QLVAPFFDPEVGAIMGRVVPVNAGANLLTRLLDLERAGGYQVDQTARMNLGLVPQYGGTVGGIRCRALAEIGGWNIDTLA
EDTDVTFRLLQRGWKTVYQNRSECYEEVPEVWPVRVRQISRWSRGHNQVMVNNIWKLVTNRRISLRERVDGALLLLIFIM
PPIQLLGWVIAAILFYIAAQSIVSGWVFLTALLCYGGLGSNAAFFEIAAATYLDGHRNRIRLLPLNLFGFLVSMVAISRA
ALTQIADAWRKRELVWDKTERFRTPVPGATGAVPAASDTKPGGEAR
>Mature_445_residues
GTMDTVSLVNHVLLAASLCIIALLVIYTARHYVFTLNRLFGRQRQPYLDIEHGVWPQVVVCVAAHNEERVIADCLNALLE
VDYPHDRMTIMPVNDRSTDGTRQIIDDIAAKHPGRFSLFHRTEGRPGKAAALRDATALIEAEIMIVFDADYLPARGLIKQ
LVAPFFDPEVGAIMGRVVPVNAGANLLTRLLDLERAGGYQVDQTARMNLGLVPQYGGTVGGIRCRALAEIGGWNIDTLAE
DTDVTFRLLQRGWKTVYQNRSECYEEVPEVWPVRVRQISRWSRGHNQVMVNNIWKLVTNRRISLRERVDGALLLLIFIMP
PIQLLGWVIAAILFYIAAQSIVSGWVFLTALLCYGGLGSNAAFFEIAAATYLDGHRNRIRLLPLNLFGFLVSMVAISRAA
LTQIADAWRKRELVWDKTERFRTPVPGATGAVPAASDTKPGGEAR

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=247, Percent_Identity=29.5546558704453, Blast_Score=108, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 49637; Mature: 49506

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTMDTVSLVNHVLLAASLCIIALLVIYTARHYVFTLNRLFGRQRQPYLDIEHGVWPQVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHE
VCVAAHNEERVIADCLNALLEVDYPHDRMTIMPVNDRSTDGTRQIIDDIAAKHPGRFSLF
EEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
HRTEGRPGKAAALRDATALIEAEIMIVFDADYLPARGLIKQLVAPFFDPEVGAIMGRVVP
ECCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHCCEEE
VNAGANLLTRLLDLERAGGYQVDQTARMNLGLVPQYGGTVGGIRCRALAEIGGWNIDTLA
ECCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHCC
EDTDVTFRLLQRGWKTVYQNRSECYEEVPEVWPVRVRQISRWSRGHNQVMVNNIWKLVTN
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHC
RRISLRERVDGALLLLIFIMPPIQLLGWVIAAILFYIAAQSIVSGWVFLTALLCYGGLGS
CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NAAFFEIAAATYLDGHRNRIRLLPLNLFGFLVSMVAISRAALTQIADAWRKRELVWDKTE
CCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RFRTPVPGATGAVPAASDTKPGGEAR
HHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GTMDTVSLVNHVLLAASLCIIALLVIYTARHYVFTLNRLFGRQRQPYLDIEHGVWPQVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHE
VCVAAHNEERVIADCLNALLEVDYPHDRMTIMPVNDRSTDGTRQIIDDIAAKHPGRFSLF
EEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
HRTEGRPGKAAALRDATALIEAEIMIVFDADYLPARGLIKQLVAPFFDPEVGAIMGRVVP
ECCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHCCEEE
VNAGANLLTRLLDLERAGGYQVDQTARMNLGLVPQYGGTVGGIRCRALAEIGGWNIDTLA
ECCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHCC
EDTDVTFRLLQRGWKTVYQNRSECYEEVPEVWPVRVRQISRWSRGHNQVMVNNIWKLVTN
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHC
RRISLRERVDGALLLLIFIMPPIQLLGWVIAAILFYIAAQSIVSGWVFLTALLCYGGLGS
CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NAAFFEIAAATYLDGHRNRIRLLPLNLFGFLVSMVAISRAALTQIADAWRKRELVWDKTE
CCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RFRTPVPGATGAVPAASDTKPGGEAR
HHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]