Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
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Accession | NC_007348 |
Length | 2,726,152 |
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The map label for this gene is 73538767
Identifier: 73538767
GI number: 73538767
Start: 1667695
End: 1669371
Strand: Reverse
Name: 73538767
Synonym: Reut_B4942
Alternate gene names: NA
Gene position: 1669371-1667695 (Counterclockwise)
Preceding gene: 73538768
Following gene: 73538766
Centisome position: 61.24
GC content: 72.33
Gene sequence:
>1677_bases ATGCGTAAGGCCGCCGCGGCAAGTGCCGGAATCGCTCTGGCATTGTGGCTGGCGGCGTCCGGGCCGGCGCAAGCGGGCGC GGCCGGTGCGGAAGGCGCCGATTTCATCTACGTGGTCGAACGTGGCGACAACCTGTTCAACGTGGCTGAGCGCTTCATGG CCAGCGCCGAAGGCTGGCGCGTGCTTCAGGCACGCAATGGCGTGGCTGATCCTTTTCGGCTGGCGCCCGGCACGCGCCTG CGCATCCCGCTTGGGCAGATTCCCGAGCAGCCCGGTGCGGCGCGCGTGGTCTTCGTCAACGGGCAGGCGCAGGCCGATGG CGAGCCGCTGCGCGCGGGCATGGCGCTGCGCGAGGCCGCGCGCATCGTGACCGCGGCCGGCAGCACCCTCACGCTGGAGC TGCCTGACCGCACGCGCGTGACGCTGCCGCCGGCCACGACCGTGACGGTGCGGCGCCTGCGCACGTTCCGCAAGTCCGGA CTGACCGATACGGTGATCGGCATCGAGCGCGGCCAGGCCGACACGCGTGTCGCGCCCGAGGGCGGCGGCGTGGGCCGCTT CGAACTGCATACGCCGATGATGGTGACTGGTGTTCGCGGCACGCGCTACCGCGTGTCCGCCGATGCCGCGGGCAGCCGCA GCGAGGTACTGGAAGGCCGCGTCGGCGTCAGTCTTGCGCGTGCGGCGGCGGCATCCGGCACGGCGGTGGCGGCTGGTTAC GGCATCGGTGTGGCGGCAGGCGCCGCCCTGTCGCGACCCGTTGCGCTGCTGCCCGCGCCCCAACTGCAACCGCTGCCTGA CACGGTCCTTGGGCCGGCTGCGGACGCCGCGTGGCAACCCGTGCAGGGCGCCGCCGGCTATCGCGTCTCGGTCGCGCGCG ATGCCGCGCATACCGAGCTGGTCTGGACAGGCGAAACGGCGGACACGCGTGTCGGCCTGGATGGCCTGCCCGAAGGATCG CTCTACCTTGCTGTGAGCGCCATTGACGCGCAGCGCCTGACCGGAAAGCCGGCATCCGTGCCGTTTGCGGTGCGGCTGAA TCCGGCAGCGCCATTCACGTTGCAGCCGGCCGCCGGCACCGTGCGCTATGGCGAATCGGTCGCGTTTGAGTGGGCGGCCG TGGGCGCCGCGGCATCCTACGAACTCGCCGTGTCCGCCGATGCGGGGTTTGCCGCGACCGCAGCCACACAGCAAGCCCGG TCGGAGCACGCGGCACAGAAACTTGGGCCGGGCGCCTGGTTCTGGCGTGTGCGCTCGCTGGACGCGGCCGGGCGGCCCGG ACCATGGTCGGCCGCCGTGCCGTTCACGCTAGAGCCCGCGCCGCCCATGCCGACGCTGCGCGACGACGGCGACAGCCTGC GCATCGGCTGGCCCGCGGACGCGCGGGCGACGGCGGGATACCGCGTGCAGATCGCCGAGGACGCCGGCTTTACCCGCATG GTGGGGGACCAGCGCAGCGCCGACAACGAAGTGGCACTGCCGCGGCCACCGGCCGGTACCTACTATGTGCGCGTGGCGCG CGCCTTGCCGGACGGCAAGGAGCCAGAGACCTCATTCTCCGCGCCGCAGCGTCTCGACATCGTCGCGCTCCTGCGTGACG GACAGGGCGTCACGATCCGGCTCGGCAACGGCGCCCGCGACGAAGGCGGCCATGACGCCGGTATCCGCATCCGGTAA
Upstream 100 bases:
>100_bases CGCATCAAGCTGGCATTGCGGCCCGAGAACGGCGTGAGGCTCACGTCGATCTATTCGCACGGCTACCGTTTCGAAGAGGC AGATGCCGGGGACGATGGCC
Downstream 100 bases:
>100_bases GTCGGGGCGACGTGCGCCGGATGCCGCCTTCGGGCGTCGCACGCTCGTCGAATGGGCCTTGCTGCTGGCTGCCGTGCTGG CGCTGGTGACGGTCGTCGCG
Product: peptidoglycan-binding LysM
Products: NA
Alternate protein names: LysM Domain-Containing Protein; LysM Cell Wall-Like Protein; LysM Domain-Containing; LysM Motif-Containing Protein; LysM Domain Protein
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MRKAAAASAGIALALWLAASGPAQAGAAGAEGADFIYVVERGDNLFNVAERFMASAEGWRVLQARNGVADPFRLAPGTRL RIPLGQIPEQPGAARVVFVNGQAQADGEPLRAGMALREAARIVTAAGSTLTLELPDRTRVTLPPATTVTVRRLRTFRKSG LTDTVIGIERGQADTRVAPEGGGVGRFELHTPMMVTGVRGTRYRVSADAAGSRSEVLEGRVGVSLARAAAASGTAVAAGY GIGVAAGAALSRPVALLPAPQLQPLPDTVLGPAADAAWQPVQGAAGYRVSVARDAAHTELVWTGETADTRVGLDGLPEGS LYLAVSAIDAQRLTGKPASVPFAVRLNPAAPFTLQPAAGTVRYGESVAFEWAAVGAAASYELAVSADAGFAATAATQQAR SEHAAQKLGPGAWFWRVRSLDAAGRPGPWSAAVPFTLEPAPPMPTLRDDGDSLRIGWPADARATAGYRVQIAEDAGFTRM VGDQRSADNEVALPRPPAGTYYVRVARALPDGKEPETSFSAPQRLDIVALLRDGQGVTIRLGNGARDEGGHDAGIRIR
Sequences:
>Translated_558_residues MRKAAAASAGIALALWLAASGPAQAGAAGAEGADFIYVVERGDNLFNVAERFMASAEGWRVLQARNGVADPFRLAPGTRL RIPLGQIPEQPGAARVVFVNGQAQADGEPLRAGMALREAARIVTAAGSTLTLELPDRTRVTLPPATTVTVRRLRTFRKSG LTDTVIGIERGQADTRVAPEGGGVGRFELHTPMMVTGVRGTRYRVSADAAGSRSEVLEGRVGVSLARAAAASGTAVAAGY GIGVAAGAALSRPVALLPAPQLQPLPDTVLGPAADAAWQPVQGAAGYRVSVARDAAHTELVWTGETADTRVGLDGLPEGS LYLAVSAIDAQRLTGKPASVPFAVRLNPAAPFTLQPAAGTVRYGESVAFEWAAVGAAASYELAVSADAGFAATAATQQAR SEHAAQKLGPGAWFWRVRSLDAAGRPGPWSAAVPFTLEPAPPMPTLRDDGDSLRIGWPADARATAGYRVQIAEDAGFTRM VGDQRSADNEVALPRPPAGTYYVRVARALPDGKEPETSFSAPQRLDIVALLRDGQGVTIRLGNGARDEGGHDAGIRIR >Mature_558_residues MRKAAAASAGIALALWLAASGPAQAGAAGAEGADFIYVVERGDNLFNVAERFMASAEGWRVLQARNGVADPFRLAPGTRL RIPLGQIPEQPGAARVVFVNGQAQADGEPLRAGMALREAARIVTAAGSTLTLELPDRTRVTLPPATTVTVRRLRTFRKSG LTDTVIGIERGQADTRVAPEGGGVGRFELHTPMMVTGVRGTRYRVSADAAGSRSEVLEGRVGVSLARAAAASGTAVAAGY GIGVAAGAALSRPVALLPAPQLQPLPDTVLGPAADAAWQPVQGAAGYRVSVARDAAHTELVWTGETADTRVGLDGLPEGS LYLAVSAIDAQRLTGKPASVPFAVRLNPAAPFTLQPAAGTVRYGESVAFEWAAVGAAASYELAVSADAGFAATAATQQAR SEHAAQKLGPGAWFWRVRSLDAAGRPGPWSAAVPFTLEPAPPMPTLRDDGDSLRIGWPADARATAGYRVQIAEDAGFTRM VGDQRSADNEVALPRPPAGTYYVRVARALPDGKEPETSFSAPQRLDIVALLRDGQGVTIRLGNGARDEGGHDAGIRIR
Specific function: Unknown
COG id: COG4254
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57852; Mature: 57852
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKAAAASAGIALALWLAASGPAQAGAAGAEGADFIYVVERGDNLFNVAERFMASAEGWR CCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEE VLQARNGVADPFRLAPGTRLRIPLGQIPEQPGAARVVFVNGQAQADGEPLRAGMALREAA EEEECCCCCCCEECCCCCEEEECHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH RIVTAAGSTLTLELPDRTRVTLPPATTVTVRRLRTFRKSGLTDTVIGIERGQADTRVAPE HHEEECCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCC GGGVGRFELHTPMMVTGVRGTRYRVSADAAGSRSEVLEGRVGVSLARAAAASGTAVAAGY CCCCEEEEECCCEEEECCCCCEEEEECCCCCCHHHHHHCCCCHHHHHHHHCCCCEEEECC GIGVAAGAALSRPVALLPAPQLQPLPDTVLGPAADAAWQPVQGAAGYRVSVARDAAHTEL CCHHHHCHHHCCCEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEE VWTGETADTRVGLDGLPEGSLYLAVSAIDAQRLTGKPASVPFAVRLNPAAPFTLQPAAGT EEECCCCCCEECCCCCCCCCEEEEEEEECHHHHCCCCCCCEEEEEECCCCCEEECCCCCE VRYGESVAFEWAAVGAAASYELAVSADAGFAATAATQQARSEHAAQKLGPGAWFWRVRSL EECCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEC DAAGRPGPWSAAVPFTLEPAPPMPTLRDDGDSLRIGWPADARATAGYRVQIAEDAGFTRM CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEE VGDQRSADNEVALPRPPAGTYYVRVARALPDGKEPETSFSAPQRLDIVALLRDGQGVTIR CCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEE LGNGARDEGGHDAGIRIR ECCCCCCCCCCCCCCEEC >Mature Secondary Structure MRKAAAASAGIALALWLAASGPAQAGAAGAEGADFIYVVERGDNLFNVAERFMASAEGWR CCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEE VLQARNGVADPFRLAPGTRLRIPLGQIPEQPGAARVVFVNGQAQADGEPLRAGMALREAA EEEECCCCCCCEECCCCCEEEECHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH RIVTAAGSTLTLELPDRTRVTLPPATTVTVRRLRTFRKSGLTDTVIGIERGQADTRVAPE HHEEECCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCC GGGVGRFELHTPMMVTGVRGTRYRVSADAAGSRSEVLEGRVGVSLARAAAASGTAVAAGY CCCCEEEEECCCEEEECCCCCEEEEECCCCCCHHHHHHCCCCHHHHHHHHCCCCEEEECC GIGVAAGAALSRPVALLPAPQLQPLPDTVLGPAADAAWQPVQGAAGYRVSVARDAAHTEL CCHHHHCHHHCCCEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEE VWTGETADTRVGLDGLPEGSLYLAVSAIDAQRLTGKPASVPFAVRLNPAAPFTLQPAAGT EEECCCCCCEECCCCCCCCCEEEEEEEECHHHHCCCCCCCEEEEEECCCCCEEECCCCCE VRYGESVAFEWAAVGAAASYELAVSADAGFAATAATQQARSEHAAQKLGPGAWFWRVRSL EECCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEC DAAGRPGPWSAAVPFTLEPAPPMPTLRDDGDSLRIGWPADARATAGYRVQIAEDAGFTRM CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEE VGDQRSADNEVALPRPPAGTYYVRVARALPDGKEPETSFSAPQRLDIVALLRDGQGVTIR CCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEE LGNGARDEGGHDAGIRIR ECCCCCCCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA