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The map label for this gene is omp32 [H]

Identifier: 73538696

GI number: 73538696

Start: 1586804

End: 1587919

Strand: Reverse

Name: omp32 [H]

Synonym: Reut_B4871

Alternate gene names: 73538696

Gene position: 1587919-1586804 (Counterclockwise)

Preceding gene: 73538697

Following gene: 73538695

Centisome position: 58.25

GC content: 66.49

Gene sequence:

>1116_bases
ATGAAACGCAAGAGCATTCACCGTGCCGGCCAGGGGTTCCTGGCGCTGGCGGCGCTGGCGGCGTTGCCTGCGGTCGCCAC
CGCGCAATCCGTGACGCTTTATGGCGTCGTGGACACCGGCGTCGAGTACGTGGGTTCGATCGGCGCCAAGAAGGACAGCG
TGGTACGCATACCGAACGTCACGGGTACCGTGCCGTCGCGCTGGGGCCTGCGTGGCACGGAGGACCTCGGTGGCGGCCTG
AAGAGCGTGTTCGTGCTGGAATCGGGGTTTGCTGCGGACTCCGGCACGTCGGGCCAGGGTGGCCGGCTGTTCGGCCGCCA
GGCACTCGTTGGCTTGTCCGGCAACTGGGGACAGGTCGCGCTGGGACGCCAGTACACGATGCTGTTCTGGGCGATGCTGG
ACGCGGATATCCTCGGGCCGCAGGTCTACGGCACCGGTTCGCTGGACAGCTACATTCCCAACGCGCGGGCCGACAACGCA
GTTTCGTACAAGGGCACCTTCGGCGGCCTGACTCTGGGCGCGACCTACAGCTTCGGACGCGACACCGTCAACGCGGGCCC
CAGCCCGGTCGGTACGAACTGCGCGGGCGAGAATCCGGCTGACAAGTCCGCTTGCCGCGAATGGTCCGCGCTGATCCAGT
ATGCGACCGCAAACTGGGGCGTGTCGGCGGCATACGACTCGTTGCGCGGCGGGCCGGGCGCGTTTGCCGGCCTGACCAGC
AGCGGACTGAAGGATGACCGGCTCTCCGTCAGCGGCTACGCCTTGTTTGATCGCACGAAGATCGGTGTCGGGGTGCTCAG
TCGCAACAATGAAGGAAGTCCGACCGCGCGCAGCGAACTGTATTACGCCGGCGCAGCGTATGACGTGACGCCTGCCTTCA
CGATCGCGGGCCAGGTCAACTACCTGAGGTATCGCCACAGCGACAACAAGGCGCTGCTCTACGCGCTGCGCGGGACGTAC
GCGCTGTCGAAACGGACGTCGGTCTACGGCACGGCCGGCTACATCAACAACGACGGTCAGCTCGCGCTGTCCGTGAGCAG
CGGTGCCGCGGGCGGCAATCCCACGCCGGGCGGCTCCCAATTCGGCTTCATGGCGGGTGTGAAGCACGTCTTCTAG

Upstream 100 bases:

>100_bases
ATCTCGGCCGTTGCCGCATTGCTGCTGTTGCAGCGGCCCGCGGCTAAAGACTGACCAGGGCAACAAGAGATCACAAGAGA
AGGAAGGAGAAAGCGAGACA

Downstream 100 bases:

>100_bases
ACGCGCCGTCACGTCATGGCATATCCCAGGTAAGGGTTTTCACGAGGTCGGTCGGATTTCGCTTGCAATATCAGGTAACC
TGATATTAAATTGATTCCAC

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MKRKSIHRAGQGFLALAALAALPAVATAQSVTLYGVVDTGVEYVGSIGAKKDSVVRIPNVTGTVPSRWGLRGTEDLGGGL
KSVFVLESGFAADSGTSGQGGRLFGRQALVGLSGNWGQVALGRQYTMLFWAMLDADILGPQVYGTGSLDSYIPNARADNA
VSYKGTFGGLTLGATYSFGRDTVNAGPSPVGTNCAGENPADKSACREWSALIQYATANWGVSAAYDSLRGGPGAFAGLTS
SGLKDDRLSVSGYALFDRTKIGVGVLSRNNEGSPTARSELYYAGAAYDVTPAFTIAGQVNYLRYRHSDNKALLYALRGTY
ALSKRTSVYGTAGYINNDGQLALSVSSGAAGGNPTPGGSQFGFMAGVKHVF

Sequences:

>Translated_371_residues
MKRKSIHRAGQGFLALAALAALPAVATAQSVTLYGVVDTGVEYVGSIGAKKDSVVRIPNVTGTVPSRWGLRGTEDLGGGL
KSVFVLESGFAADSGTSGQGGRLFGRQALVGLSGNWGQVALGRQYTMLFWAMLDADILGPQVYGTGSLDSYIPNARADNA
VSYKGTFGGLTLGATYSFGRDTVNAGPSPVGTNCAGENPADKSACREWSALIQYATANWGVSAAYDSLRGGPGAFAGLTS
SGLKDDRLSVSGYALFDRTKIGVGVLSRNNEGSPTARSELYYAGAAYDVTPAFTIAGQVNYLRYRHSDNKALLYALRGTY
ALSKRTSVYGTAGYINNDGQLALSVSSGAAGGNPTPGGSQFGFMAGVKHVF
>Mature_371_residues
MKRKSIHRAGQGFLALAALAALPAVATAQSVTLYGVVDTGVEYVGSIGAKKDSVVRIPNVTGTVPSRWGLRGTEDLGGGL
KSVFVLESGFAADSGTSGQGGRLFGRQALVGLSGNWGQVALGRQYTMLFWAMLDADILGPQVYGTGSLDSYIPNARADNA
VSYKGTFGGLTLGATYSFGRDTVNAGPSPVGTNCAGENPADKSACREWSALIQYATANWGVSAAYDSLRGGPGAFAGLTS
SGLKDDRLSVSGYALFDRTKIGVGVLSRNNEGSPTARSELYYAGAAYDVTPAFTIAGQVNYLRYRHSDNKALLYALRGTY
ALSKRTSVYGTAGYINNDGQLALSVSSGAAGGNPTPGGSQFGFMAGVKHVF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38417; Mature: 38417

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKSIHRAGQGFLALAALAALPAVATAQSVTLYGVVDTGVEYVGSIGAKKDSVVRIPNV
CCCCHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHCCCCCCCCEEECCCC
TGTVPSRWGLRGTEDLGGGLKSVFVLESGFAADSGTSGQGGRLFGRQALVGLSGNWGQVA
CCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCEEEEEECCCCCEEE
LGRQYTMLFWAMLDADILGPQVYGTGSLDSYIPNARADNAVSYKGTFGGLTLGATYSFGR
ECCHHHHHHHHHHHHHHCCCEEEECCCHHHHCCCCCCCCCEEECCCCCCEEEEEEECCCC
DTVNAGPSPVGTNCAGENPADKSACREWSALIQYATANWGVSAAYDSLRGGPGAFAGLTS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC
SGLKDDRLSVSGYALFDRTKIGVGVLSRNNEGSPTARSELYYAGAAYDVTPAFTIAGQVN
CCCCCCCEEECEEEEEECCEECEEEEECCCCCCCCHHCEEEEECCEECCCCEEEEECCEE
YLRYRHSDNKALLYALRGTYALSKRTSVYGTAGYINNDGQLALSVSSGAAGGNPTPGGSQ
EEEEEECCCCEEEEEEECCEEECCCCEEEEECCEECCCCCEEEEEECCCCCCCCCCCCCC
FGFMAGVKHVF
CHHHHHHHHCC
>Mature Secondary Structure
MKRKSIHRAGQGFLALAALAALPAVATAQSVTLYGVVDTGVEYVGSIGAKKDSVVRIPNV
CCCCHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHCCCCCCCCEEECCCC
TGTVPSRWGLRGTEDLGGGLKSVFVLESGFAADSGTSGQGGRLFGRQALVGLSGNWGQVA
CCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCEEECCEEEEEECCCCCEEE
LGRQYTMLFWAMLDADILGPQVYGTGSLDSYIPNARADNAVSYKGTFGGLTLGATYSFGR
ECCHHHHHHHHHHHHHHCCCEEEECCCHHHHCCCCCCCCCEEECCCCCCEEEEEEECCCC
DTVNAGPSPVGTNCAGENPADKSACREWSALIQYATANWGVSAAYDSLRGGPGAFAGLTS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC
SGLKDDRLSVSGYALFDRTKIGVGVLSRNNEGSPTARSELYYAGAAYDVTPAFTIAGQVN
CCCCCCCEEECEEEEEECCEECEEEEECCCCCCCCHHCEEEEECCEECCCCEEEEECCEE
YLRYRHSDNKALLYALRGTYALSKRTSVYGTAGYINNDGQLALSVSSGAAGGNPTPGGSQ
EEEEEECCCCEEEEEEECCEEECCCCEEEEECCEECCCCCEEEEEECCCCCCCCCCCCCC
FGFMAGVKHVF
CHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]