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The map label for this gene is ndoA [H]

Identifier: 73538546

GI number: 73538546

Start: 1422036

End: 1422350

Strand: Direct

Name: ndoA [H]

Synonym: Reut_B4721

Alternate gene names: 73538546

Gene position: 1422036-1422350 (Clockwise)

Preceding gene: 73538545

Following gene: 73538547

Centisome position: 52.16

GC content: 65.08

Gene sequence:

>315_bases
ATGACCGAAACCTGGATCGAGGCAGCGGCGCTATCCGGCGTGCCGCAGGACGACGTGATCGCCGTGGCCGTGCAAGGCAA
GGAGATCGCGCTGTACAGCGTGGACGGCGACGTCTATGCGACCGACAACATCTGCACGCACGGCCACGCACGCCTGTGCG
AAGGCTTTCTTGAGGGGCACGAGATCGAGTGCCCGCTTCACCAGGGCAGGTTCGACATCCGCAACGGAGCGGCCATGTGC
GCGCCGCTGACCGAGGGCATCCGCATCTATCCCGTGCGGATCGAGGGCGGCAAGGTCTTCGTGGACCTCGGTTAA

Upstream 100 bases:

>100_bases
ACGGACGGCCGAAGGCTGGAAGTTCGCGTCACGCCTCTGCATATTCGACAGCGAGATGATCCTCAACTCGCTGATCTACC
CCATCTGACAAGGAGCCCTC

Downstream 100 bases:

>100_bases
CACGCCTGCGTCAGAACCAGAGGAACTCCGCATGCATGACGAACAACCGCGCGGCGCGACCGCTAACGTGCCGACCAGCA
CGATCGTCATCGTTGGCGCA

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MTETWIEAAALSGVPQDDVIAVAVQGKEIALYSVDGDVYATDNICTHGHARLCEGFLEGHEIECPLHQGRFDIRNGAAMC
APLTEGIRIYPVRIEGGKVFVDLG

Sequences:

>Translated_104_residues
MTETWIEAAALSGVPQDDVIAVAVQGKEIALYSVDGDVYATDNICTHGHARLCEGFLEGHEIECPLHQGRFDIRNGAAMC
APLTEGIRIYPVRIEGGKVFVDLG
>Mature_103_residues
TETWIEAAALSGVPQDDVIAVAVQGKEIALYSVDGDVYATDNICTHGHARLCEGFLEGHEIECPLHQGRFDIRNGAAMCA
PLTEGIRIYPVRIEGGKVFVDLG

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. This subunit is a 2Fe-2S ferredoxin that transfers electrons

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=99, Percent_Identity=39.3939393939394, Blast_Score=83, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.-.-.-

Molecular weight: Translated: 11214; Mature: 11083

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETWIEAAALSGVPQDDVIAVAVQGKEIALYSVDGDVYATDNICTHGHARLCEGFLEGH
CCCHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCEEEECCEECCCCHHHHHHHHCCC
EIECPLHQGRFDIRNGAAMCAPLTEGIRIYPVRIEGGKVFVDLG
EEECCCCCCEEEECCCCEEEEECCCCEEEEEEEECCCEEEEEEC
>Mature Secondary Structure 
TETWIEAAALSGVPQDDVIAVAVQGKEIALYSVDGDVYATDNICTHGHARLCEGFLEGH
CCHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCEEEECCEECCCCHHHHHHHHCCC
EIECPLHQGRFDIRNGAAMCAPLTEGIRIYPVRIEGGKVFVDLG
EEECCCCCCEEEECCCCEEEEECCCCEEEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA