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The map label for this gene is yhfR [C]

Identifier: 73538525

GI number: 73538525

Start: 1398082

End: 1398894

Strand: Direct

Name: yhfR [C]

Synonym: Reut_B4699

Alternate gene names: 73538525

Gene position: 1398082-1398894 (Clockwise)

Preceding gene: 73538513

Following gene: 73538526

Centisome position: 51.28

GC content: 62.36

Gene sequence:

>813_bases
ATGTCGGCTGTTACCGGAATCGGCGCCAGCACGGCAAAACCCATGGAAAACGAGATCGACGTCTACCCGCCTTCGCTTGC
GGCCACGCCACCGCGACACCTGGATCTGGCCCGAACGTTGATGCAGGAGATCGTCAATGGACGTCCGCGCATTGGCGAAT
TCCTTCCGACGGAAGCGGAGCTGTGCGAGCAGTGGAATCTGAGCCGCTACGCCGTGCGGCAGGCCATTCAGAAGCTAACA
AGCCTCGGCATGGTCAGCCGTCAGGCCGGTGTGGGCACGCGGGTCATCTCGGACCGGCCGCGGGAACGCTACATGCAGGT
CATGGACTCCCCGGCCGACCTGGCTGGCTATGCCAAGGGCACGACGCTGCGAACGTCTTCTTGCGAGCGGATCCAGGCGG
ATCCGGCCCAGGCCAGACTGCTGCGTAGCGACGTGGGAGCCGAATGGCTGCATATCGCCGGGATCCGGTATGGGGCGGAC
GCCAAGCGCGAGCCTATCGCCCTGGTGGACATCTATGTCGACCAGGCCTATAGCAGGTTGCCGGAACTAGGCGCAGTCCT
GAGCGTTCCCGTCTATACGATGATCGAGAAGGAATATGGCATCAAGGTGACCCGCGTCGAGCAGGAGTTGCAGGGGCTGT
TGATCGCCGATGCACAGGCCGAACTGCTGCAGGTCGAAGACCGCTCCGCCGGATTGCGCATCATCCGCACGTACTTTCTC
CGCGACAAGGTTATCGCTGTCACCACTGGCGTCCATCCGGCAAGCCGGTTCAGCTACTTGATGAGCTACCAGCTGACCCA
GGATGTCAGGTGA

Upstream 100 bases:

>100_bases
TCGTGCGATGCGAACGGAATAGTTACCGCCGCGATGACAGCACTATAGGACTTTGTTCGAATATTCGAATATTAGTAGAA
ACCCTGTGGCTTGCGCTATC

Downstream 100 bases:

>100_bases
TCACTACTCCCAAACATTGGCGGATGCGACAGCGTGGTTTTGCTTGGGGCAACCATCACGATGGACGCTACGGCGTACTC
GCCCCCGGAACTGGCCGTCA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; GntR-Family Transcriptional Regulator; GntR Family Regulatory Protein; Regulatory Protein GntR HTH; Gntr Family Transcriptional Regulator; Transcriptional Regulator Gntr Family; Transcriptional Regulator GntR Family Protein; Transcriptional Regulator GntR UbiC Families; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSAVTGIGASTAKPMENEIDVYPPSLAATPPRHLDLARTLMQEIVNGRPRIGEFLPTEAELCEQWNLSRYAVRQAIQKLT
SLGMVSRQAGVGTRVISDRPRERYMQVMDSPADLAGYAKGTTLRTSSCERIQADPAQARLLRSDVGAEWLHIAGIRYGAD
AKREPIALVDIYVDQAYSRLPELGAVLSVPVYTMIEKEYGIKVTRVEQELQGLLIADAQAELLQVEDRSAGLRIIRTYFL
RDKVIAVTTGVHPASRFSYLMSYQLTQDVR

Sequences:

>Translated_270_residues
MSAVTGIGASTAKPMENEIDVYPPSLAATPPRHLDLARTLMQEIVNGRPRIGEFLPTEAELCEQWNLSRYAVRQAIQKLT
SLGMVSRQAGVGTRVISDRPRERYMQVMDSPADLAGYAKGTTLRTSSCERIQADPAQARLLRSDVGAEWLHIAGIRYGAD
AKREPIALVDIYVDQAYSRLPELGAVLSVPVYTMIEKEYGIKVTRVEQELQGLLIADAQAELLQVEDRSAGLRIIRTYFL
RDKVIAVTTGVHPASRFSYLMSYQLTQDVR
>Mature_269_residues
SAVTGIGASTAKPMENEIDVYPPSLAATPPRHLDLARTLMQEIVNGRPRIGEFLPTEAELCEQWNLSRYAVRQAIQKLTS
LGMVSRQAGVGTRVISDRPRERYMQVMDSPADLAGYAKGTTLRTSSCERIQADPAQARLLRSDVGAEWLHIAGIRYGADA
KREPIALVDIYVDQAYSRLPELGAVLSVPVYTMIEKEYGIKVTRVEQELQGLLIADAQAELLQVEDRSAGLRIIRTYFLR
DKVIAVTTGVHPASRFSYLMSYQLTQDVR

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30009; Mature: 29878

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVTGIGASTAKPMENEIDVYPPSLAATPPRHLDLARTLMQEIVNGRPRIGEFLPTEAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
LCEQWNLSRYAVRQAIQKLTSLGMVSRQAGVGTRVISDRPRERYMQVMDSPADLAGYAKG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCHHHHHCCCC
TTLRTSSCERIQADPAQARLLRSDVGAEWLHIAGIRYGADAKREPIALVDIYVDQAYSRL
CEEECCCCHHHCCCHHHHHHHHHHCCCCHHHEECEEECCCCCCCCEEEEHHHHHHHHHHH
PELGAVLSVPVYTMIEKEYGIKVTRVEQELQGLLIADAQAELLQVEDRSAGLRIIRTYFL
HHHHHHHHHHHHHHHHHHHCCEEEHHHHHHCCEEEECCHHHHHHHCCCCCCHHHHHHHHH
RDKVIAVTTGVHPASRFSYLMSYQLTQDVR
HCCEEEEECCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAVTGIGASTAKPMENEIDVYPPSLAATPPRHLDLARTLMQEIVNGRPRIGEFLPTEAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
LCEQWNLSRYAVRQAIQKLTSLGMVSRQAGVGTRVISDRPRERYMQVMDSPADLAGYAKG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCHHHHHCCCC
TTLRTSSCERIQADPAQARLLRSDVGAEWLHIAGIRYGADAKREPIALVDIYVDQAYSRL
CEEECCCCHHHCCCHHHHHHHHHHCCCCHHHEECEEECCCCCCCCEEEEHHHHHHHHHHH
PELGAVLSVPVYTMIEKEYGIKVTRVEQELQGLLIADAQAELLQVEDRSAGLRIIRTYFL
HHHHHHHHHHHHHHHHHHHCCEEEHHHHHHCCEEEECCHHHHHHHCCCCCCHHHHHHHHH
RDKVIAVTTGVHPASRFSYLMSYQLTQDVR
HCCEEEEECCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA