Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_007348 |
Length | 2,726,152 |
Click here to switch to the map view.
The map label for this gene is 73538425
Identifier: 73538425
GI number: 73538425
Start: 1283633
End: 1284631
Strand: Reverse
Name: 73538425
Synonym: Reut_B4598
Alternate gene names: NA
Gene position: 1284631-1283633 (Counterclockwise)
Preceding gene: 73538426
Following gene: 73538424
Centisome position: 47.12
GC content: 65.67
Gene sequence:
>999_bases GTGGCAAGCTTCCCACTATGTGCCGTCCGCAAGCTGATGGCGCTCTTTGCGCTACTCGCAATGCTGGCGGGTATCGCAGC GCCGCCGGCGCAGGCCGCATATCCCGACAAGCCCATTCGCATCGTCGTGCCGTTTTCCCCGGGCGGCGGCACGGACCTGA TCTCGCGCGCCATGGGCGTCGCGATGGGCCAGGACCTGGGCCAACCTGTGGTCATCGACAATCGACCCGGCGGCGGAACC ATCATCGGTACGGATAACGTCGCCAAGGCTCCCCCAGACGGCTACACGCTGGTCATGGCGACGTTCGCGCATGCCGTCAA CCCTAGTTTGCAGCCGAAGCTGCCTTACCAGACCGACAAGGCCTTCGCGCCAGTCATGCTGATCGGCCGGTCGCCCAATG TGCTCGTCGTGCGGGCCGACAGTCCGTACAAGTCAGTGCGGGACATCATCAATGCTGCCCGCGCAAAGCCGGGGCAGCTC TCGTTCGCATCCCAGGGCCCCGGCACATCAGCGCATCTGGCTGGCGAGTTGTTCAAAAGCCTGGCCAGGATCGACCTCAA CCACATCCCGTACAAGGGGGCCGGCCCTGCCATCACCGATCTCCTCGGCGGGCAGGTGGACATGATGTTTGCGACGGCGT CGGCTGTGGGCAACCTGCTCGAATCGGGCAAGCTGCGTGCGCTCGGGGTAACCACGTCTCAACGCTCCACCAGCGCCGAC CTGGCGCAGGTGCCGACCATCGCCGAGGCCGGCGTACCGGAATACGTCGCGGAGAGCTGGTATGGGCTGTTCGTCCCGGC CGGTACGCCCGCGCCCGTGATCGCCCGCTTGAACGCCGCGGCCCGAAAGGCTGTGACGGCTGATGCATTCCGCAAACGCG TAGCGTCGGAGGGTCTGATCGTCTCGCCCGGAACGCCTGAAGATCTCGCCCGCTACGTGCTCGGAGAGCAGGCGCGCTGG AGCAAGGTCGTCAAGGACGCCCACATCACCCTTAACTGA
Upstream 100 bases:
>100_bases CATAGCGTGGAATTGCACTGCAGACCTTTTGACGCACCGCGCTTAACCTGTTTCTGCAGCCGGCACATCGTGCCGGCGAC TCAGACGACAGGAGACCACC
Downstream 100 bases:
>100_bases CATCCTCCGCAACATCATCCAGGCACCCATCATGAGCGAATACCAACTGATCCATCTCGAAGACCGTGCAGGCATCGCAG TCCTGACGCTGAACCGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MASFPLCAVRKLMALFALLAMLAGIAAPPAQAAYPDKPIRIVVPFSPGGGTDLISRAMGVAMGQDLGQPVVIDNRPGGGT IIGTDNVAKAPPDGYTLVMATFAHAVNPSLQPKLPYQTDKAFAPVMLIGRSPNVLVVRADSPYKSVRDIINAARAKPGQL SFASQGPGTSAHLAGELFKSLARIDLNHIPYKGAGPAITDLLGGQVDMMFATASAVGNLLESGKLRALGVTTSQRSTSAD LAQVPTIAEAGVPEYVAESWYGLFVPAGTPAPVIARLNAAARKAVTADAFRKRVASEGLIVSPGTPEDLARYVLGEQARW SKVVKDAHITLN
Sequences:
>Translated_332_residues MASFPLCAVRKLMALFALLAMLAGIAAPPAQAAYPDKPIRIVVPFSPGGGTDLISRAMGVAMGQDLGQPVVIDNRPGGGT IIGTDNVAKAPPDGYTLVMATFAHAVNPSLQPKLPYQTDKAFAPVMLIGRSPNVLVVRADSPYKSVRDIINAARAKPGQL SFASQGPGTSAHLAGELFKSLARIDLNHIPYKGAGPAITDLLGGQVDMMFATASAVGNLLESGKLRALGVTTSQRSTSAD LAQVPTIAEAGVPEYVAESWYGLFVPAGTPAPVIARLNAAARKAVTADAFRKRVASEGLIVSPGTPEDLARYVLGEQARW SKVVKDAHITLN >Mature_331_residues ASFPLCAVRKLMALFALLAMLAGIAAPPAQAAYPDKPIRIVVPFSPGGGTDLISRAMGVAMGQDLGQPVVIDNRPGGGTI IGTDNVAKAPPDGYTLVMATFAHAVNPSLQPKLPYQTDKAFAPVMLIGRSPNVLVVRADSPYKSVRDIINAARAKPGQLS FASQGPGTSAHLAGELFKSLARIDLNHIPYKGAGPAITDLLGGQVDMMFATASAVGNLLESGKLRALGVTTSQRSTSADL AQVPTIAEAGVPEYVAESWYGLFVPAGTPAPVIARLNAAARKAVTADAFRKRVASEGLIVSPGTPEDLARYVLGEQARWS KVVKDAHITLN
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34555; Mature: 34424
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFPLCAVRKLMALFALLAMLAGIAAPPAQAAYPDKPIRIVVPFSPGGGTDLISRAMGV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH AMGQDLGQPVVIDNRPGGGTIIGTDNVAKAPPDGYTLVMATFAHAVNPSLQPKLPYQTDK HHHHCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC AFAPVMLIGRSPNVLVVRADSPYKSVRDIINAARAKPGQLSFASQGPGTSAHLAGELFKS CCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHH LARIDLNHIPYKGAGPAITDLLGGQVDMMFATASAVGNLLESGKLRALGVTTSQRSTSAD HHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCH LAQVPTIAEAGVPEYVAESWYGLFVPAGTPAPVIARLNAAARKAVTADAFRKRVASEGLI HHHCCCHHHCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE VSPGTPEDLARYVLGEQARWSKVVKDAHITLN ECCCCHHHHHHHHHCCHHHHHHHHHCCCEEEC >Mature Secondary Structure ASFPLCAVRKLMALFALLAMLAGIAAPPAQAAYPDKPIRIVVPFSPGGGTDLISRAMGV CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH AMGQDLGQPVVIDNRPGGGTIIGTDNVAKAPPDGYTLVMATFAHAVNPSLQPKLPYQTDK HHHHCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC AFAPVMLIGRSPNVLVVRADSPYKSVRDIINAARAKPGQLSFASQGPGTSAHLAGELFKS CCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHH LARIDLNHIPYKGAGPAITDLLGGQVDMMFATASAVGNLLESGKLRALGVTTSQRSTSAD HHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCH LAQVPTIAEAGVPEYVAESWYGLFVPAGTPAPVIARLNAAARKAVTADAFRKRVASEGLI HHHCCCHHHCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE VSPGTPEDLARYVLGEQARWSKVVKDAHITLN ECCCCHHHHHHHHHCCHHHHHHHHHCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]