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The map label for this gene is cyoA [H]

Identifier: 73538406

GI number: 73538406

Start: 1259155

End: 1260075

Strand: Reverse

Name: cyoA [H]

Synonym: Reut_B4579

Alternate gene names: 73538406

Gene position: 1260075-1259155 (Counterclockwise)

Preceding gene: 73538408

Following gene: 73538405

Centisome position: 46.22

GC content: 66.34

Gene sequence:

>921_bases
ATGCGCAAATCCATCGCCGCCCTCGCGCTGTTGCTGGGCGGCTGTTCATTTGAACTGCTGTCCCCGAAAGGCCCGGTCGG
CGCGCAGGAGCGCGACCTGATCCTGCTGGCGACCGGCCTGATGCTGACGGTCGTGATCCCGGTAATTGTCCTCACGCTGT
ACTTCGCCTGGCGTTACCGCGAGACCAACACCAAGGCGGAGTACGCGCCGCGCTGGTCCCATTCGACGGCGATCGAAGTG
GTGGTGTGGGGCATCCCGTGCGTGATCGTGGCGGCGCTCGGCATCATCATCTGGGAGACGACGCACAGGCTGGACCCGTA
CCGGCCGCTCGAAGCGAAAGTCACGCCGGTCGAGGTCGACGTGGTGGCGATGGACTGGAAGTGGCTGTTCATCTATCCGC
AATATGGCGTCGCCTCGCTGAACGAGCTGGCCGTGCCGGTCGGCACGCCAGTCAACTTCCGCATCACCGCGGAATCGACC
ATGAATGCGCTGTTCATCCCGCAGCTCGGCAGCATGGTGTACGCGATGAGCGGCATGCAGACGAAGCTGCATCTGCTGGC
CGACACGCCGGGCGTCTACGACGGCCGCTCTGCTGCCTACAGCGGTGCCGGCTTTTCCGACATGCATTTCAAGACGTACG
CCACGTCGCGCGAGGCCTTCGACGCCTGGATCGCGCGCGCCCGCGCTTCCGGCCAGGCGCTCGACGAACGCGCCTATGGC
GCGCTCAAGCGCCCCAGCAGCAAGGACCCGGTCACCCTGTATGCCAGCGTATCGCCGCGGCTGTTCCAGGCCGTGGTCGA
TCAGTACATGCCCGGCATGGACGGCGTGTGCCGCTCCGACAGCCCGGCCACGCTGCAAGCGGCGCTCTCTCTGCCCGCGC
CGGCTACCCCTATCTCCGCGACCCCCGCGACCATTCGCTAA

Upstream 100 bases:

>100_bases
TTGTAGGTGGATAGTCACCGAAAAGTTTGCCTTGTATGGATGTTGTCTTACCTTACCATCGCGACCGCCCCAGGTAAATC
CATACAAAGGTTTGTCAAAG

Downstream 100 bases:

>100_bases
GCCATGTTTGGAAAACTCACCCTCGCGGCCATCCCCACCCACGAGCCCATCATCATGGGCACGCTGGTGGCGGTGCTGCT
GCTCGGCGGCGCCCTGGTGG

Product: cytochrome O ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MRKSIAALALLLGGCSFELLSPKGPVGAQERDLILLATGLMLTVVIPVIVLTLYFAWRYRETNTKAEYAPRWSHSTAIEV
VVWGIPCVIVAALGIIIWETTHRLDPYRPLEAKVTPVEVDVVAMDWKWLFIYPQYGVASLNELAVPVGTPVNFRITAEST
MNALFIPQLGSMVYAMSGMQTKLHLLADTPGVYDGRSAAYSGAGFSDMHFKTYATSREAFDAWIARARASGQALDERAYG
ALKRPSSKDPVTLYASVSPRLFQAVVDQYMPGMDGVCRSDSPATLQAALSLPAPATPISATPATIR

Sequences:

>Translated_306_residues
MRKSIAALALLLGGCSFELLSPKGPVGAQERDLILLATGLMLTVVIPVIVLTLYFAWRYRETNTKAEYAPRWSHSTAIEV
VVWGIPCVIVAALGIIIWETTHRLDPYRPLEAKVTPVEVDVVAMDWKWLFIYPQYGVASLNELAVPVGTPVNFRITAEST
MNALFIPQLGSMVYAMSGMQTKLHLLADTPGVYDGRSAAYSGAGFSDMHFKTYATSREAFDAWIARARASGQALDERAYG
ALKRPSSKDPVTLYASVSPRLFQAVVDQYMPGMDGVCRSDSPATLQAALSLPAPATPISATPATIR
>Mature_306_residues
MRKSIAALALLLGGCSFELLSPKGPVGAQERDLILLATGLMLTVVIPVIVLTLYFAWRYRETNTKAEYAPRWSHSTAIEV
VVWGIPCVIVAALGIIIWETTHRLDPYRPLEAKVTPVEVDVVAMDWKWLFIYPQYGVASLNELAVPVGTPVNFRITAEST
MNALFIPQLGSMVYAMSGMQTKLHLLADTPGVYDGRSAAYSGAGFSDMHFKTYATSREAFDAWIARARASGQALDERAYG
ALKRPSSKDPVTLYASVSPRLFQAVVDQYMPGMDGVCRSDSPATLQAALSLPAPATPISATPATIR

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=269, Percent_Identity=50.1858736059479, Blast_Score=298, Evalue=2e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 33272; Mature: 33272

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSIAALALLLGGCSFELLSPKGPVGAQERDLILLATGLMLTVVIPVIVLTLYFAWRYR
CCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEE
ETNTKAEYAPRWSHSTAIEVVVWGIPCVIVAALGIIIWETTHRLDPYRPLEAKVTPVEVD
CCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHEECHHHCCCCCCCCCCCCCEEEEE
VVAMDWKWLFIYPQYGVASLNELAVPVGTPVNFRITAESTMNALFIPQLGSMVYAMSGMQ
EEEEEEEEEEEECCCCCCCHHHEEEECCCCEEEEEEECCCCCEEEHHHHHHHHHHHCCCC
TKLHLLADTPGVYDGRSAAYSGAGFSDMHFKTYATSREAFDAWIARARASGQALDERAYG
EEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEHHCCHHHHHHHHHHHHCCCCHHHHHHHH
ALKRPSSKDPVTLYASVSPRLFQAVVDQYMPGMDGVCRSDSPATLQAALSLPAPATPISA
HHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
TPATIR
CCCCCC
>Mature Secondary Structure
MRKSIAALALLLGGCSFELLSPKGPVGAQERDLILLATGLMLTVVIPVIVLTLYFAWRYR
CCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEE
ETNTKAEYAPRWSHSTAIEVVVWGIPCVIVAALGIIIWETTHRLDPYRPLEAKVTPVEVD
CCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHEECHHHCCCCCCCCCCCCCEEEEE
VVAMDWKWLFIYPQYGVASLNELAVPVGTPVNFRITAESTMNALFIPQLGSMVYAMSGMQ
EEEEEEEEEEEECCCCCCCHHHEEEECCCCEEEEEEECCCCCEEEHHHHHHHHHHHCCCC
TKLHLLADTPGVYDGRSAAYSGAGFSDMHFKTYATSREAFDAWIARARASGQALDERAYG
EEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEHHCCHHHHHHHHHHHHCCCCHHHHHHHH
ALKRPSSKDPVTLYASVSPRLFQAVVDQYMPGMDGVCRSDSPATLQAALSLPAPATPISA
HHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
TPATIR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]