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The map label for this gene is ygeY [H]

Identifier: 73538364

GI number: 73538364

Start: 1211211

End: 1212371

Strand: Direct

Name: ygeY [H]

Synonym: Reut_B4537

Alternate gene names: 73538364

Gene position: 1211211-1212371 (Clockwise)

Preceding gene: 73538363

Following gene: 73538365

Centisome position: 44.43

GC content: 68.39

Gene sequence:

>1161_bases
ATGAACAACCAGACAGACAATCTCAGCGACGTCATTGCGCTGACGCGCGAGATGGTGCGCATTCCGAGCCTCTCCGGCCG
CGAAGGCGACGTGGCCGCGCTTCTGGCGCGCCGCATGACCGAAGCCGGCTTCACATCGGTCACGACAGACGGCAACGGCA
GCGTGCTCGGGCTGATCGGCCCGGAGGACGCCGAGGTGGCCCTGCTCTTCGACGGCCACATGGACGTCGTCCCCGTCACA
GGACAGTGGCGCTTCGACCCGTTCGGCGGCACGATCCATGACGGCCGGCTGTACGGGCGCGGCACCACCGACATGAAAGG
CGGCATCGCCGCGGCCATCTGCGGCGTGGCGGCCGCCGCGCGTGAACGGCCGCTGCGCCGCCGCATCGCCGTGTCCGCCA
GTGTGCTCGAGGAGATCATCGAGGGGCACGCGCTGGCATCGGTACTCGACCGTTGCCAGCCGGCGGCCGTGGTGATCTGC
GAGCCGTCGAAGCTGCAGATCAAGCGCGGGCAGAAGGGCCGGCTTGAGATCCTGCTGACGTTCCACGGCAAACCCGCCCA
TGCGGCGACGCCCCACCTTGGCGTGAATCCGCTTCAGGCTGCCGCGCGCGCATTGACGGCGCTCGAAGGGCTGAATCTGC
CGACCGACCGCGTGCTCGGCGCCGCACTGCTCGTGCCGACCGATATCGTCTCGGCGCCCTATCCTTCGATCTCGATGATC
CCGACTTCGACCACGATCCGCTTCGATCGCCGCACGCTCGATGGCGAGACGCGCGAGGACGTGCTTGGGCAGATCGACGC
CTGCCTGCGCACAGCGGGCCTGCACGATTTCACGCTGGCCGTGTCGGATGACGAGGTGCGGACGTTCACCGGCGAATCGG
CGCGGCCGACGCGCTGGCTGCCCGCGTGGCAGCAACCGGACAGCACGCCGCTCGTGCAGGCCGCCACGCGAGCCGTCACG
CAAGCCGGCCGCTCCCCGCAAGTCGGCACCTGGGCGTTCTGCACGAACGGGTCCGAGTCTGCGGGGCGGCGCCGGATTCC
GACCATCGGACTCGGTCCGGGGTGTGAAGAGGATGCGCACACCATCGATGAATCAATCGCGCTTGAACAGCTGGATGGTG
CGCGGGAGATCTTTCGCAACCTGGTGTTGGAGATGGCGTGA

Upstream 100 bases:

>100_bases
GGCATGTACTTCCTCGCCTCCTTCACCGTGATCGGCGCGCTGCTGGTGCTGCGCGTGCCGGCAACGCTGGTCAACCGCTG
ATTGCACAGGACGTACCACG

Downstream 100 bases:

>100_bases
TGGCGCGCGGCGCTTGCATGAAGCGCCGCGTCATCCCCCGCCCTGGTGAAAGCGGCTGGGCCGCAGCGCCCGCCAAGAGC
GATAACCTGGCCCCCGACCA

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MNNQTDNLSDVIALTREMVRIPSLSGREGDVAALLARRMTEAGFTSVTTDGNGSVLGLIGPEDAEVALLFDGHMDVVPVT
GQWRFDPFGGTIHDGRLYGRGTTDMKGGIAAAICGVAAAARERPLRRRIAVSASVLEEIIEGHALASVLDRCQPAAVVIC
EPSKLQIKRGQKGRLEILLTFHGKPAHAATPHLGVNPLQAAARALTALEGLNLPTDRVLGAALLVPTDIVSAPYPSISMI
PTSTTIRFDRRTLDGETREDVLGQIDACLRTAGLHDFTLAVSDDEVRTFTGESARPTRWLPAWQQPDSTPLVQAATRAVT
QAGRSPQVGTWAFCTNGSESAGRRRIPTIGLGPGCEEDAHTIDESIALEQLDGAREIFRNLVLEMA

Sequences:

>Translated_386_residues
MNNQTDNLSDVIALTREMVRIPSLSGREGDVAALLARRMTEAGFTSVTTDGNGSVLGLIGPEDAEVALLFDGHMDVVPVT
GQWRFDPFGGTIHDGRLYGRGTTDMKGGIAAAICGVAAAARERPLRRRIAVSASVLEEIIEGHALASVLDRCQPAAVVIC
EPSKLQIKRGQKGRLEILLTFHGKPAHAATPHLGVNPLQAAARALTALEGLNLPTDRVLGAALLVPTDIVSAPYPSISMI
PTSTTIRFDRRTLDGETREDVLGQIDACLRTAGLHDFTLAVSDDEVRTFTGESARPTRWLPAWQQPDSTPLVQAATRAVT
QAGRSPQVGTWAFCTNGSESAGRRRIPTIGLGPGCEEDAHTIDESIALEQLDGAREIFRNLVLEMA
>Mature_386_residues
MNNQTDNLSDVIALTREMVRIPSLSGREGDVAALLARRMTEAGFTSVTTDGNGSVLGLIGPEDAEVALLFDGHMDVVPVT
GQWRFDPFGGTIHDGRLYGRGTTDMKGGIAAAICGVAAAARERPLRRRIAVSASVLEEIIEGHALASVLDRCQPAAVVIC
EPSKLQIKRGQKGRLEILLTFHGKPAHAATPHLGVNPLQAAARALTALEGLNLPTDRVLGAALLVPTDIVSAPYPSISMI
PTSTTIRFDRRTLDGETREDVLGQIDACLRTAGLHDFTLAVSDDEVRTFTGESARPTRWLPAWQQPDSTPLVQAATRAVT
QAGRSPQVGTWAFCTNGSESAGRRRIPTIGLGPGCEEDAHTIDESIALEQLDGAREIFRNLVLEMA

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1789236, Length=380, Percent_Identity=31.0526315789474, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1788816, Length=282, Percent_Identity=30.8510638297872, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1790395, Length=411, Percent_Identity=26.2773722627737, Blast_Score=95, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR017706
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 41218; Mature: 41218

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQTDNLSDVIALTREMVRIPSLSGREGDVAALLARRMTEAGFTSVTTDGNGSVLGLIG
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEEEC
PEDAEVALLFDGHMDVVPVTGQWRFDPFGGTIHDGRLYGRGTTDMKGGIAAAICGVAAAA
CCCCEEEEEEECCEEEEECCCCEEECCCCCEEECCEEEECCCCCCCCCHHHHHHHHHHHH
RERPLRRRIAVSASVLEEIIEGHALASVLDRCQPAAVVICEPSKLQIKRGQKGRLEILLT
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCEEEEEE
FHGKPAHAATPHLGVNPLQAAARALTALEGLNLPTDRVLGAALLVPTDIVSAPYPSISMI
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCCCEEEE
PTSTTIRFDRRTLDGETREDVLGQIDACLRTAGLHDFTLAVSDDEVRTFTGESARPTRWL
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCC
PAWQQPDSTPLVQAATRAVTQAGRSPQVGTWAFCTNGSESAGRRRIPTIGLGPGCEEDAH
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCHHHH
TIDESIALEQLDGAREIFRNLVLEMA
HHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNNQTDNLSDVIALTREMVRIPSLSGREGDVAALLARRMTEAGFTSVTTDGNGSVLGLIG
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEEEC
PEDAEVALLFDGHMDVVPVTGQWRFDPFGGTIHDGRLYGRGTTDMKGGIAAAICGVAAAA
CCCCEEEEEEECCEEEEECCCCEEECCCCCEEECCEEEECCCCCCCCCHHHHHHHHHHHH
RERPLRRRIAVSASVLEEIIEGHALASVLDRCQPAAVVICEPSKLQIKRGQKGRLEILLT
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCEEEEEE
FHGKPAHAATPHLGVNPLQAAARALTALEGLNLPTDRVLGAALLVPTDIVSAPYPSISMI
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCCCEEEE
PTSTTIRFDRRTLDGETREDVLGQIDACLRTAGLHDFTLAVSDDEVRTFTGESARPTRWL
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCC
PAWQQPDSTPLVQAATRAVTQAGRSPQVGTWAFCTNGSESAGRRRIPTIGLGPGCEEDAH
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCHHHH
TIDESIALEQLDGAREIFRNLVLEMA
HHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]