Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
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Accession | NC_007348 |
Length | 2,726,152 |
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The map label for this gene is eda [H]
Identifier: 73537857
GI number: 73537857
Start: 664709
End: 665350
Strand: Direct
Name: eda [H]
Synonym: Reut_B4024
Alternate gene names: 73537857
Gene position: 664709-665350 (Clockwise)
Preceding gene: 73537856
Following gene: 73537860
Centisome position: 24.38
GC content: 68.85
Gene sequence:
>642_bases ATGCAACTTCAACCTTCCCCGCTGCTCGCGCGGCTGGCCAATGTGCCAGTCATTCCTGTGCTGGAATTCGGTTCCGTCGA CGAAGCGCTGCATGTCAGCGAAGCGCTGGTGGCCGGCGGCCTGCCGCTGCTCGAAATCACGCTGCGCACGCCGGTCGCCA TGGATGCCATGCGCGCCGTGGCCGCCAAGATTCCGGGCGCCTGCGTGGGCGCCGGTACGGTGCTGACCGTGGAACAGCTC CACGCCGTGCGCGATGCCGGCGCGCAGTTCGCCGTATCTCCGGGCCTGACACCGACGCTGGCCGCTGGTGCGCAGGATGC AGGCATCTCGCTGCTGCCGGGCGTGGCCACGGCCAGCGAGGCCATGGCCGCCCTGGAGTCCGGTTTCACCTTCCTGAAGT TCTTCCCGGCCCAGGCCGCCGGCGGCGTGCCGATGCTCAAGTCGCTGTACGGGCCGCTGGCGCAACTGCGTTTCTGCCCC ACCGGAGGTATTGATGCAGCGCTGGCACCGAGCTATCTCGCCTTGCCCAATGTGGTGTGCGTGGGCGGTTCATGGGTGGT GCCGAAGGACGCCGTTGCTGCCGGCGACTGGGGCCGCATCCGCAAGCTCGCGGAAGACGCTGCGGCATTGCGCCGGGGCT GA
Upstream 100 bases:
>100_bases ATTCCTTCCGCGGAGACCGTGCTCGCCAGACTGGCGCAGTCGGTGTCCGTGATTGCCTGATCAGATCCACACTTCCTTGT CCGCAACGAACCTGACTGCC
Downstream 100 bases:
>100_bases GCCTCCGCATAGCCCGGAATGCAAAACGGCACGCCATGCGTGCCGTTTTGCCAGGGATGCGCTGTGCCCCGGATGCCGGG GCGTACCGCTTACTTGTGGC
Product: 2-keto-3-deoxy-phosphogluconate aldolase
Products: NA
Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase; 2-keto-4-hydroxyglutarate aldolase; KHG-aldolase; 2-dehydro-3-deoxy-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MQLQPSPLLARLANVPVIPVLEFGSVDEALHVSEALVAGGLPLLEITLRTPVAMDAMRAVAAKIPGACVGAGTVLTVEQL HAVRDAGAQFAVSPGLTPTLAAGAQDAGISLLPGVATASEAMAALESGFTFLKFFPAQAAGGVPMLKSLYGPLAQLRFCP TGGIDAALAPSYLALPNVVCVGGSWVVPKDAVAAGDWGRIRKLAEDAAALRRG
Sequences:
>Translated_213_residues MQLQPSPLLARLANVPVIPVLEFGSVDEALHVSEALVAGGLPLLEITLRTPVAMDAMRAVAAKIPGACVGAGTVLTVEQL HAVRDAGAQFAVSPGLTPTLAAGAQDAGISLLPGVATASEAMAALESGFTFLKFFPAQAAGGVPMLKSLYGPLAQLRFCP TGGIDAALAPSYLALPNVVCVGGSWVVPKDAVAAGDWGRIRKLAEDAAALRRG >Mature_213_residues MQLQPSPLLARLANVPVIPVLEFGSVDEALHVSEALVAGGLPLLEITLRTPVAMDAMRAVAAKIPGACVGAGTVLTVEQL HAVRDAGAQFAVSPGLTPTLAAGAQDAGISLLPGVATASEAMAALESGFTFLKFFPAQAAGGVPMLKSLYGPLAQLRFCP TGGIDAALAPSYLALPNVVCVGGSWVVPKDAVAAGDWGRIRKLAEDAAALRRG
Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KHG/KDPG aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1788156, Length=182, Percent_Identity=53.8461538461538, Blast_Score=196, Evalue=1e-51, Organism=Escherichia coli, GI48994954, Length=129, Percent_Identity=37.984496124031, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000887 - InterPro: IPR013785 [H]
Pfam domain/function: PF01081 Aldolase [H]
EC number: =4.1.3.16; =4.1.2.14 [H]
Molecular weight: Translated: 21571; Mature: 21571
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS00159 ALDOLASE_KDPG_KHG_1 ; PS00160 ALDOLASE_KDPG_KHG_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLQPSPLLARLANVPVIPVLEFGSVDEALHVSEALVAGGLPLLEITLRTPVAMDAMRAV CCCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH AAKIPGACVGAGTVLTVEQLHAVRDAGAQFAVSPGLTPTLAAGAQDAGISLLPGVATASE HHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCCCCCCEECCCCHHHHH AMAALESGFTFLKFFPAQAAGGVPMLKSLYGPLAQLRFCPTGGIDAALAPSYLALPNVVC HHHHHHCCCCEEEEECHHCCCCCHHHHHHHHHHHHEEECCCCCCCHHHCCCHHHCCCEEE VGGSWVVPKDAVAAGDWGRIRKLAEDAAALRRG ECCCEECCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQLQPSPLLARLANVPVIPVLEFGSVDEALHVSEALVAGGLPLLEITLRTPVAMDAMRAV CCCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH AAKIPGACVGAGTVLTVEQLHAVRDAGAQFAVSPGLTPTLAAGAQDAGISLLPGVATASE HHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCCCCCCEECCCCHHHHH AMAALESGFTFLKFFPAQAAGGVPMLKSLYGPLAQLRFCPTGGIDAALAPSYLALPNVVC HHHHHHCCCCEEEEECHHCCCCCHHHHHHHHHHHHEEECCCCCCCHHHCCCHHHCCCEEE VGGSWVVPKDAVAAGDWGRIRKLAEDAAALRRG ECCCEECCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]