Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_007348 |
Length | 2,726,152 |
Click here to switch to the map view.
The map label for this gene is czcB [H]
Identifier: 73537802
GI number: 73537802
Start: 605131
End: 606354
Strand: Reverse
Name: czcB [H]
Synonym: Reut_B3969
Alternate gene names: 73537802
Gene position: 606354-605131 (Counterclockwise)
Preceding gene: 73537803
Following gene: 73537801
Centisome position: 22.24
GC content: 66.58
Gene sequence:
>1224_bases ATGGCAATCACCAAGACCCAACGCAACGCGATCGTTGCCATCATCGGCGTCGGCGTGCTGGCTGGCGCCGCACTACTCTT CAGCGGCCGTGGTCCCGGCGACGACCACGATCACGGCGAACACGCCGCGGAGCCGAGCAGCAACGAAAGTGGAAAGGAAG ACAAGGCCACCGCATCGGCCAACGACGCGCATGCCGCCGACCGCATCGCCATGACGCCCGAGCAGATCCGCAGCGCCGGA CTGGAATTGCACACAGCCGGCCCCGGCCGCGTGCAGGCCGCCGTGCAGTTTCCCGGCGAAATCCGCTTCAATGAAGACCG CACCGCCCACGTCGTGCCGCGCGTGGTCGGCGTAGCCGAGTCCGTGCCGGCCGTGCTGGGTCAGCGCGTGAAGAAGGGAG AACTGCTTGCGGTACTGGCCAGTACACAGCTTTCGGATCAGCGCAGCGAACTGCTGGCTGCGCAGAAGCGGCTGGAACTC GCCCGCACGACCTATACGCGCGAGAAGCGCCTGTGGGAGGACAAGATCTCGGCCGAACAGGATTTTCTGGCCGCGCGCAC CGCGCTGCAGGAAGCCGAGATCGCGGTGCGGAACGCGACCCAGAAGCTCACCGCAATCGGCGCCCGGCCGGCGTCGGCCG GACTCAACAAGTTCGAGTTGCGCGCGCCGTTCGACGGCATCGTCGTCGAAAAGCACCTCGCACTCGGCGAAGCGGTAGCG GCGGACACGACCGTCTTTACGATTTCCGATCTCGCCACCGTGTGGGCTGAGTTCGTGATCGCGCCGAAGGACCTGAGCCA GGTACGGCTCGGCGAGAAAGTCAGCATCGCTTCCACCGCGTTCGACGGCACTGCCACGGGCACCGTGTCCTACGTGGGCT CGCTGCTCGGCCAGCAGACACGCACCGCGACCGCGCGCGTAACGCTGTCGAACCCGGACATGGCATGGCGCCCCGGCCTC TTCGTTACGGTCAGCGTGGCCGGACAGGAAACCGAAGTCCCCGTCGTCGTCGAAAGCGAAGCCGTGCAGACTGAAAGCAG CCAGCCAATGGTCTATGTCGAGGTCCCAGGCGGCTTTGAGGCGCGCCCGGTCGCCACGGGACGCAGCGACGGCAAACGGA TCGAGATCGTCAAGGGGCTGGAGCCAGGCGCACGCTACGTCGCACGCAACAGTTTCGTGCTGAAGGCCGAGCAAGGCAAG GCCGGCGCCGAGCACGCCCACTGA
Upstream 100 bases:
>100_bases CAGGCACGGGTGCGCTATCTCGGGGCCGTGGCCGCGACCTACCAGGCCGCCACGGCCATCGACCGCATGCTCGGCCGCTG AGCGGCTACCAAGGATTCCC
Downstream 100 bases:
>100_bases TCCGCAGGAGCTGACCATGTTCGAACGCATCATCCGCTTTGCCATCGAGCAGCGCTGGCTGGTCCTGCTGGCAGTGCTTG GCATAGCGCTGCTGGGCCTC
Product: secretion protein HlyD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MAITKTQRNAIVAIIGVGVLAGAALLFSGRGPGDDHDHGEHAAEPSSNESGKEDKATASANDAHAADRIAMTPEQIRSAG LELHTAGPGRVQAAVQFPGEIRFNEDRTAHVVPRVVGVAESVPAVLGQRVKKGELLAVLASTQLSDQRSELLAAQKRLEL ARTTYTREKRLWEDKISAEQDFLAARTALQEAEIAVRNATQKLTAIGARPASAGLNKFELRAPFDGIVVEKHLALGEAVA ADTTVFTISDLATVWAEFVIAPKDLSQVRLGEKVSIASTAFDGTATGTVSYVGSLLGQQTRTATARVTLSNPDMAWRPGL FVTVSVAGQETEVPVVVESEAVQTESSQPMVYVEVPGGFEARPVATGRSDGKRIEIVKGLEPGARYVARNSFVLKAEQGK AGAEHAH
Sequences:
>Translated_407_residues MAITKTQRNAIVAIIGVGVLAGAALLFSGRGPGDDHDHGEHAAEPSSNESGKEDKATASANDAHAADRIAMTPEQIRSAG LELHTAGPGRVQAAVQFPGEIRFNEDRTAHVVPRVVGVAESVPAVLGQRVKKGELLAVLASTQLSDQRSELLAAQKRLEL ARTTYTREKRLWEDKISAEQDFLAARTALQEAEIAVRNATQKLTAIGARPASAGLNKFELRAPFDGIVVEKHLALGEAVA ADTTVFTISDLATVWAEFVIAPKDLSQVRLGEKVSIASTAFDGTATGTVSYVGSLLGQQTRTATARVTLSNPDMAWRPGL FVTVSVAGQETEVPVVVESEAVQTESSQPMVYVEVPGGFEARPVATGRSDGKRIEIVKGLEPGARYVARNSFVLKAEQGK AGAEHAH >Mature_406_residues AITKTQRNAIVAIIGVGVLAGAALLFSGRGPGDDHDHGEHAAEPSSNESGKEDKATASANDAHAADRIAMTPEQIRSAGL ELHTAGPGRVQAAVQFPGEIRFNEDRTAHVVPRVVGVAESVPAVLGQRVKKGELLAVLASTQLSDQRSELLAAQKRLELA RTTYTREKRLWEDKISAEQDFLAARTALQEAEIAVRNATQKLTAIGARPASAGLNKFELRAPFDGIVVEKHLALGEAVAA DTTVFTISDLATVWAEFVIAPKDLSQVRLGEKVSIASTAFDGTATGTVSYVGSLLGQQTRTATARVTLSNPDMAWRPGLF VTVSVAGQETEVPVVVESEAVQTESSQPMVYVEVPGGFEARPVATGRSDGKRIEIVKGLEPGARYVARNSFVLKAEQGKA GAEHAH
Specific function: CzcA and CzcB together would act in zinc efflux nearly as effectively as the complete czc efflux system (CzcABC). The CzcB protein is thought to funnel zinc cations to the CzcA transport protein [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=377, Percent_Identity=24.6684350132626, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1789929, Length=353, Percent_Identity=22.0963172804533, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005695 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 43077; Mature: 42946
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITKTQRNAIVAIIGVGVLAGAALLFSGRGPGDDHDHGEHAAEPSSNESGKEDKATASA CCCCCCCCCEEEEEEHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NDAHAADRIAMTPEQIRSAGLELHTAGPGRVQAAVQFPGEIRFNEDRTAHVVPRVVGVAE CCCHHHHHHCCCHHHHHHCCCEEEECCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHHH SVPAVLGQRVKKGELLAVLASTQLSDQRSELLAAQKRLELARTTYTREKRLWEDKISAEQ HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DFLAARTALQEAEIAVRNATQKLTAIGARPASAGLNKFELRAPFDGIVVEKHLALGEAVA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEEECCCCCEEEEHHHHHHHHHH ADTTVFTISDLATVWAEFVIAPKDLSQVRLGEKVSIASTAFDGTATGTVSYVGSLLGQQT CCCEEEEHHHHHHHHHHHEECCCCHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCC RTATARVTLSNPDMAWRPGLFVTVSVAGQETEVPVVVESEAVQTESSQPMVYVEVPGGFE CCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCHHCCCCCCCEEEEECCCCCC ARPVATGRSDGKRIEIVKGLEPGARYVARNSFVLKAEQGKAGAEHAH CCEECCCCCCCCEEEEEECCCCCHHHEECCCEEEEECCCCCCCCCCC >Mature Secondary Structure AITKTQRNAIVAIIGVGVLAGAALLFSGRGPGDDHDHGEHAAEPSSNESGKEDKATASA CCCCCCCCEEEEEEHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NDAHAADRIAMTPEQIRSAGLELHTAGPGRVQAAVQFPGEIRFNEDRTAHVVPRVVGVAE CCCHHHHHHCCCHHHHHHCCCEEEECCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHHH SVPAVLGQRVKKGELLAVLASTQLSDQRSELLAAQKRLELARTTYTREKRLWEDKISAEQ HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DFLAARTALQEAEIAVRNATQKLTAIGARPASAGLNKFELRAPFDGIVVEKHLALGEAVA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEEECCCCCEEEEHHHHHHHHHH ADTTVFTISDLATVWAEFVIAPKDLSQVRLGEKVSIASTAFDGTATGTVSYVGSLLGQQT CCCEEEEHHHHHHHHHHHEECCCCHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCC RTATARVTLSNPDMAWRPGLFVTVSVAGQETEVPVVVESEAVQTESSQPMVYVEVPGGFE CCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCHHCCCCCCCEEEEECCCCCC ARPVATGRSDGKRIEIVKGLEPGARYVARNSFVLKAEQGKAGAEHAH CCEECCCCCCCCEEEEEECCCCCHHHEECCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8829543 [H]