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The map label for this gene is yngJ [H]

Identifier: 73537751

GI number: 73537751

Start: 548409

End: 549560

Strand: Direct

Name: yngJ [H]

Synonym: Reut_B3917

Alternate gene names: 73537751

Gene position: 548409-549560 (Clockwise)

Preceding gene: 73537750

Following gene: 73537752

Centisome position: 20.12

GC content: 67.36

Gene sequence:

>1152_bases
ATGAATCCCTACCTCAACGAAGACCTGCAGGCGCTGGCCGAGCATGCGCGCCGGTTTGCCGATGCGTGCATCGCACCCGG
TTTCCTGGAGCGCGACAAGACGCGCGTGCTGGACCGCTCGCTGATGCGGCAGATGGGCGAGATGGGCTTCATCGGCCCCG
AGCTGCCCGAAGCGTACGGCGGGCAGGGCATGGGTTGCCTGGCCGCCGGCGTGATCCATGAAGCGGTTGCGCGTGCGGAC
CTGAGCATGTCGTATGTCAACCTGCTGGCGTCGCTGAACGGTCAGATCCTCGCGCAGCATGCCTTGCCTGAAGTGGGGAG
GCCGTGGCTGCAGCGCCTCACCCGGGGCGAGGCGCTGTTCGCAATTGCGCTGACCGAGCCGCGCGGCGGATCGGACGCGG
GCAGCCTGCGGCTGCGCATGGAACGCGTCGGCGACAGTTACGTGCTCAACGGCGAGAAGACGTCGATTTCGGCAGCCGAC
CAGGCCGACGCCGCGGTCGTGTTTGCGCGTACGGGAAGCGTCGAGGACGGCGCGCGCGGCATTTCCGCCGTGCTGGTGCC
GATGGATCTGCCCGGCGTGACGCGCAACCGCTTTGATTGCCACGGCCAGCGCGCGATCGGGCGCGGCTCGATCTTCTTCG
AGAACGTGCGCGTGCCGGCGGACCATCTGCTGGGCACGGAAGGTCAGGGCTTTGTGCAGGTGATGCAGGGTTTCGATTTC
TCACGTGCGCTGATCGGGTTGCAGGTCCTGGCGGTGGCGCAGGCAGCGCTCGATGAGACGTGGGAATACGTGGCCGAACG
CCAGGCATTCGGCAAGCCGCTGTCGGCGTTCCAGGGCGTATCGCATCCGCTTGCGGATTTCGAGACGCAGGTCACCGCAG
CGCGCCTGCTTTGCCTGCAGACGCTCTGGCTCAAGGACCACGGCCTGCCGCATACGTCCGAGGCTGCCATGTGCAAGTGG
TGGGCACCGAAGCTGGCGTACGACGTGGTGCACCAGTGCCTGCTGTCCTTCGGGCATGGCGGCTATGACCGCGGCGTGAT
GGAGCAGCGACTGCGCGATGTGCTGGGCTTCCAGATCGGCGACGGCACGGCCCAGATCATGAAGACCATCATCGCGCGCC
ACCGTGCCGGGCGCGCTGCGGTGCCGGCCTGA

Upstream 100 bases:

>100_bases
AGGAATCACGCGAAGGCGTCAAGGCATTCCAGGAAAAGCGCAAGCCCGAATTCCGCAAGTACGCGAAGTAAGGCGCCGAC
AGGCAGATCGAGGAAACATC

Downstream 100 bases:

>100_bases
GGCCGCGCACAAGCCGGGCCATCGACATAAGAACACAGGAGACAAGCCATGGATTTCGACGCGGTACTGATTGCGCCGCG
CCGCGCGGCGAGCGTGGCGG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MNPYLNEDLQALAEHARRFADACIAPGFLERDKTRVLDRSLMRQMGEMGFIGPELPEAYGGQGMGCLAAGVIHEAVARAD
LSMSYVNLLASLNGQILAQHALPEVGRPWLQRLTRGEALFAIALTEPRGGSDAGSLRLRMERVGDSYVLNGEKTSISAAD
QADAAVVFARTGSVEDGARGISAVLVPMDLPGVTRNRFDCHGQRAIGRGSIFFENVRVPADHLLGTEGQGFVQVMQGFDF
SRALIGLQVLAVAQAALDETWEYVAERQAFGKPLSAFQGVSHPLADFETQVTAARLLCLQTLWLKDHGLPHTSEAAMCKW
WAPKLAYDVVHQCLLSFGHGGYDRGVMEQRLRDVLGFQIGDGTAQIMKTIIARHRAGRAAVPA

Sequences:

>Translated_383_residues
MNPYLNEDLQALAEHARRFADACIAPGFLERDKTRVLDRSLMRQMGEMGFIGPELPEAYGGQGMGCLAAGVIHEAVARAD
LSMSYVNLLASLNGQILAQHALPEVGRPWLQRLTRGEALFAIALTEPRGGSDAGSLRLRMERVGDSYVLNGEKTSISAAD
QADAAVVFARTGSVEDGARGISAVLVPMDLPGVTRNRFDCHGQRAIGRGSIFFENVRVPADHLLGTEGQGFVQVMQGFDF
SRALIGLQVLAVAQAALDETWEYVAERQAFGKPLSAFQGVSHPLADFETQVTAARLLCLQTLWLKDHGLPHTSEAAMCKW
WAPKLAYDVVHQCLLSFGHGGYDRGVMEQRLRDVLGFQIGDGTAQIMKTIIARHRAGRAAVPA
>Mature_383_residues
MNPYLNEDLQALAEHARRFADACIAPGFLERDKTRVLDRSLMRQMGEMGFIGPELPEAYGGQGMGCLAAGVIHEAVARAD
LSMSYVNLLASLNGQILAQHALPEVGRPWLQRLTRGEALFAIALTEPRGGSDAGSLRLRMERVGDSYVLNGEKTSISAAD
QADAAVVFARTGSVEDGARGISAVLVPMDLPGVTRNRFDCHGQRAIGRGSIFFENVRVPADHLLGTEGQGFVQVMQGFDF
SRALIGLQVLAVAQAALDETWEYVAERQAFGKPLSAFQGVSHPLADFETQVTAARLLCLQTLWLKDHGLPHTSEAAMCKW
WAPKLAYDVVHQCLLSFGHGGYDRGVMEQRLRDVLGFQIGDGTAQIMKTIIARHRAGRAAVPA

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=376, Percent_Identity=35.3723404255319, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI4501859, Length=377, Percent_Identity=31.2997347480106, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI226958412, Length=376, Percent_Identity=30.0531914893617, Blast_Score=171, Evalue=9e-43,
Organism=Homo sapiens, GI4557231, Length=379, Percent_Identity=30.0791556728232, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI187960098, Length=379, Percent_Identity=30.0791556728232, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI4501857, Length=365, Percent_Identity=29.041095890411, Blast_Score=165, Evalue=7e-41,
Organism=Homo sapiens, GI226958414, Length=336, Percent_Identity=30.952380952381, Blast_Score=163, Evalue=2e-40,
Organism=Homo sapiens, GI7656849, Length=376, Percent_Identity=29.7872340425532, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI21361497, Length=367, Percent_Identity=31.6076294277929, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI76496475, Length=390, Percent_Identity=27.4358974358974, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI4503943, Length=385, Percent_Identity=27.7922077922078, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI4557235, Length=390, Percent_Identity=27.4358974358974, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI7669494, Length=308, Percent_Identity=29.8701298701299, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI38505218, Length=249, Percent_Identity=31.3253012048193, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI48976061, Length=291, Percent_Identity=27.4914089347079, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI211971008, Length=291, Percent_Identity=27.4914089347079, Blast_Score=83, Evalue=4e-16,
Organism=Escherichia coli, GI87081958, Length=354, Percent_Identity=26.5536723163842, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI1786223, Length=311, Percent_Identity=25.7234726688103, Blast_Score=117, Evalue=9e-28,
Organism=Caenorhabditis elegans, GI17508101, Length=372, Percent_Identity=32.5268817204301, Blast_Score=181, Evalue=6e-46,
Organism=Caenorhabditis elegans, GI17570075, Length=384, Percent_Identity=31.25, Blast_Score=174, Evalue=9e-44,
Organism=Caenorhabditis elegans, GI17506239, Length=372, Percent_Identity=30.3763440860215, Blast_Score=173, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17569725, Length=380, Percent_Identity=28.9473684210526, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17534899, Length=377, Percent_Identity=28.6472148541114, Blast_Score=166, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17538396, Length=375, Percent_Identity=30.1333333333333, Blast_Score=165, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI71990804, Length=296, Percent_Identity=32.0945945945946, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17551932, Length=344, Percent_Identity=31.9767441860465, Blast_Score=148, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI17533517, Length=372, Percent_Identity=29.5698924731183, Blast_Score=147, Evalue=8e-36,
Organism=Caenorhabditis elegans, GI17505929, Length=343, Percent_Identity=31.1953352769679, Blast_Score=141, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI71982178, Length=276, Percent_Identity=28.6231884057971, Blast_Score=124, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI71985184, Length=356, Percent_Identity=28.3707865168539, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI32563615, Length=230, Percent_Identity=30.4347826086957, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17534353, Length=378, Percent_Identity=25.1322751322751, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI71985192, Length=312, Percent_Identity=28.525641025641, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17531909, Length=235, Percent_Identity=29.3617021276596, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17562446, Length=298, Percent_Identity=30.8724832214765, Blast_Score=98, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24646207, Length=370, Percent_Identity=36.2162162162162, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI21356377, Length=374, Percent_Identity=33.9572192513369, Blast_Score=191, Evalue=6e-49,
Organism=Drosophila melanogaster, GI24666513, Length=373, Percent_Identity=31.6353887399464, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24660351, Length=379, Percent_Identity=30.3430079155673, Blast_Score=162, Evalue=3e-40,
Organism=Drosophila melanogaster, GI21355753, Length=378, Percent_Identity=30.952380952381, Blast_Score=158, Evalue=5e-39,
Organism=Drosophila melanogaster, GI281363737, Length=367, Percent_Identity=28.0653950953678, Blast_Score=126, Evalue=3e-29,
Organism=Drosophila melanogaster, GI19920834, Length=383, Percent_Identity=26.8929503916449, Blast_Score=112, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.-

Molecular weight: Translated: 41551; Mature: 41551

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPYLNEDLQALAEHARRFADACIAPGFLERDKTRVLDRSLMRQMGEMGFIGPELPEAYG
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHC
GQGMGCLAAGVIHEAVARADLSMSYVNLLASLNGQILAQHALPEVGRPWLQRLTRGEALF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCEEE
AIALTEPRGGSDAGSLRLRMERVGDSYVLNGEKTSISAADQADAAVVFARTGSVEDGARG
EEEEECCCCCCCCHHHEEHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
ISAVLVPMDLPGVTRNRFDCHGQRAIGRGSIFFENVRVPADHLLGTEGQGFVQVMQGFDF
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCHHHHHHHCCCH
SRALIGLQVLAVAQAALDETWEYVAERQAFGKPLSAFQGVSHPLADFETQVTAARLLCLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
TLWLKDHGLPHTSEAAMCKWWAPKLAYDVVHQCLLSFGHGGYDRGVMEQRLRDVLGFQIG
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCEECC
DGTAQIMKTIIARHRAGRAAVPA
CCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNPYLNEDLQALAEHARRFADACIAPGFLERDKTRVLDRSLMRQMGEMGFIGPELPEAYG
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHC
GQGMGCLAAGVIHEAVARADLSMSYVNLLASLNGQILAQHALPEVGRPWLQRLTRGEALF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCEEE
AIALTEPRGGSDAGSLRLRMERVGDSYVLNGEKTSISAADQADAAVVFARTGSVEDGARG
EEEEECCCCCCCCHHHEEHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
ISAVLVPMDLPGVTRNRFDCHGQRAIGRGSIFFENVRVPADHLLGTEGQGFVQVMQGFDF
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCHHHHHHHCCCH
SRALIGLQVLAVAQAALDETWEYVAERQAFGKPLSAFQGVSHPLADFETQVTAARLLCLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
TLWLKDHGLPHTSEAAMCKWWAPKLAYDVVHQCLLSFGHGGYDRGVMEQRLRDVLGFQIG
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCEECC
DGTAQIMKTIIARHRAGRAAVPA
CCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]