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The map label for this gene is ompR [H]

Identifier: 73537743

GI number: 73537743

Start: 541271

End: 542014

Strand: Direct

Name: ompR [H]

Synonym: Reut_B3909

Alternate gene names: 73537743

Gene position: 541271-542014 (Clockwise)

Preceding gene: 73537736

Following gene: 73537744

Centisome position: 19.85

GC content: 65.73

Gene sequence:

>744_bases
ATGGACGCACACGTCGACCACATCCTGATCGTCGATGACGACCGGGAAATCCGCGAACTGGTCTCCACCTATCTCACCAA
GAATGGCCTGCGCACCACGGTGGCGCCCGATGGGCGGCACATGCGCGCGTTCCTGGAAGCCAATACCGTGGACCTGATCG
TGCTCGACGTGATGATGCCCGGCGACGACGGCCTGGTGCTGTGCCGCGAACTGCGCGCGGGCAAGCACAAGGCTACGCCG
ATCCTGATGCTGACCGCACGCGACGACGAGACCGACCGCATCATCGGACTCGAGATGGGCGCCGACGACTACCTGGCCAA
GCCGTTTGCGGCGCGCGAATTGCTGGCGCGCATCAAGGCCGTGTTGCGTCGCACGCGGATGCTGCCGCCGAACCTGCAGA
TCACTGAAGCCGCGCAGGTCCTGGCATTCGGGGACTGGGAGCTCGATACCACCGCGCGGCACCTGATCGACCGCGACGGC
ACGATCGTCGCGTTGAGCGGCGCCGAGTACCGGCTGCTGCGCGTGTTCGTCGATCATCCGCAGCGCGTGCTGAACCGCGA
CCAGCTGCTCAACCTCACGCAGGGCCGCGAGGCCGAGATGTTCGAGCGCTCGGTCGACTTGCTGGTCAGCCGCCTGCGCC
AGCGCCTCAACGACGATGCGCGCGAACCCAAACATATCAAGACCGTGCGCAACGAGGGCTACGTGTTCTCGATGCCCGTG
GAAATCCGGGAGGCACGCCAGTGA

Upstream 100 bases:

>100_bases
GGCCGCCAGATACATGGCGATACACGCGCGCCGGCCGACCCCCATACAATGCTGGCAAAGCAGGCTGCCCGTTCACTTTC
TCTTTGCCGAGGCAACAACG

Downstream 100 bases:

>100_bases
CCTTGACCTTGCCGCGCTGGGAGTGGCCCCGCACGCTCGGCGCGCGGCTGTTCCTGATCCTGCTCGCCGGCCTGGTTGTC
GCGCACGGCTTGTCGTTTGG

Product: response regulator receiver:transcriptional regulatory protein, C-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MDAHVDHILIVDDDREIRELVSTYLTKNGLRTTVAPDGRHMRAFLEANTVDLIVLDVMMPGDDGLVLCRELRAGKHKATP
ILMLTARDDETDRIIGLEMGADDYLAKPFAARELLARIKAVLRRTRMLPPNLQITEAAQVLAFGDWELDTTARHLIDRDG
TIVALSGAEYRLLRVFVDHPQRVLNRDQLLNLTQGREAEMFERSVDLLVSRLRQRLNDDAREPKHIKTVRNEGYVFSMPV
EIREARQ

Sequences:

>Translated_247_residues
MDAHVDHILIVDDDREIRELVSTYLTKNGLRTTVAPDGRHMRAFLEANTVDLIVLDVMMPGDDGLVLCRELRAGKHKATP
ILMLTARDDETDRIIGLEMGADDYLAKPFAARELLARIKAVLRRTRMLPPNLQITEAAQVLAFGDWELDTTARHLIDRDG
TIVALSGAEYRLLRVFVDHPQRVLNRDQLLNLTQGREAEMFERSVDLLVSRLRQRLNDDAREPKHIKTVRNEGYVFSMPV
EIREARQ
>Mature_247_residues
MDAHVDHILIVDDDREIRELVSTYLTKNGLRTTVAPDGRHMRAFLEANTVDLIVLDVMMPGDDGLVLCRELRAGKHKATP
ILMLTARDDETDRIIGLEMGADDYLAKPFAARELLARIKAVLRRTRMLPPNLQITEAAQVLAFGDWELDTTARHLIDRDG
TIVALSGAEYRLLRVFVDHPQRVLNRDQLLNLTQGREAEMFERSVDLLVSRLRQRLNDDAREPKHIKTVRNEGYVFSMPV
EIREARQ

Specific function: The N-terminus of this protein is required for the transcriptional expression of both major outer membrane protein genes ompF and ompC; its C-terminal moiety mediates the multimerization of the ompR protein. As a multimer, it turns on the expression of th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=44.5414847161572, Blast_Score=196, Evalue=1e-51,
Organism=Escherichia coli, GI1790863, Length=235, Percent_Identity=36.1702127659575, Blast_Score=157, Evalue=5e-40,
Organism=Escherichia coli, GI1786599, Length=231, Percent_Identity=38.0952380952381, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1787229, Length=238, Percent_Identity=36.5546218487395, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI145693140, Length=237, Percent_Identity=36.7088607594937, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1788394, Length=236, Percent_Identity=35.1694915254237, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=36.2068965517241, Blast_Score=130, Evalue=8e-32,
Organism=Escherichia coli, GI1786911, Length=234, Percent_Identity=36.7521367521368, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1786784, Length=232, Percent_Identity=35.7758620689655, Blast_Score=127, Evalue=5e-31,
Organism=Escherichia coli, GI1790860, Length=229, Percent_Identity=33.6244541484716, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI87082012, Length=229, Percent_Identity=33.1877729257642, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1787375, Length=233, Percent_Identity=30.9012875536481, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1789402, Length=230, Percent_Identity=33.4782608695652, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1790552, Length=229, Percent_Identity=33.1877729257642, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1790299, Length=130, Percent_Identity=30.7692307692308, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1788550, Length=165, Percent_Identity=28.4848484848485, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787487, Length=102, Percent_Identity=33.3333333333333, Blast_Score=61, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=108, Percent_Identity=35.1851851851852, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 28227; Mature: 28227

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAHVDHILIVDDDREIRELVSTYLTKNGLRTTVAPDGRHMRAFLEANTVDLIVLDVMMP
CCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCHHHHHEECCCCEEEEEEEEEEC
GDDGLVLCRELRAGKHKATPILMLTARDDETDRIIGLEMGADDYLAKPFAARELLARIKA
CCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEECCCHHHHCCHHHHHHHHHHHH
VLRRTRMLPPNLQITEAAQVLAFGDWELDTTARHLIDRDGTIVALSGAEYRLLRVFVDHP
HHHHHHCCCCCCCHHHHHHEEEECCCCCHHHHHHHHCCCCCEEEECCCCEEEHHHHHHCH
QRVLNRDQLLNLTQGREAEMFERSVDLLVSRLRQRLNDDAREPKHIKTVRNEGYVFSMPV
HHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCH
EIREARQ
HHHCCCC
>Mature Secondary Structure
MDAHVDHILIVDDDREIRELVSTYLTKNGLRTTVAPDGRHMRAFLEANTVDLIVLDVMMP
CCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCHHHHHEECCCCEEEEEEEEEEC
GDDGLVLCRELRAGKHKATPILMLTARDDETDRIIGLEMGADDYLAKPFAARELLARIKA
CCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEECCCHHHHCCHHHHHHHHHHHH
VLRRTRMLPPNLQITEAAQVLAFGDWELDTTARHLIDRDGTIVALSGAEYRLLRVFVDHP
HHHHHHCCCCCCCHHHHHHEEEECCCCCHHHHHHHHCCCCCEEEECCCCEEEHHHHHHCH
QRVLNRDQLLNLTQGREAEMFERSVDLLVSRLRQRLNDDAREPKHIKTVRNEGYVFSMPV
HHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCH
EIREARQ
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]