Definition Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence.
Accession NC_007348
Length 2,726,152

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The map label for this gene is dipZ [H]

Identifier: 73537742

GI number: 73537742

Start: 539278

End: 541074

Strand: Reverse

Name: dipZ [H]

Synonym: Reut_B3908

Alternate gene names: 73537742

Gene position: 541074-539278 (Counterclockwise)

Preceding gene: 73537747

Following gene: 73537741

Centisome position: 19.85

GC content: 69.45

Gene sequence:

>1797_bases
ATGACCTTGCTGATCCTCGCCTACCTGGGCGGTGCCCTGACCATCCTGAGTCCATGCATCCTGCCCGTCTTGCCCTTTGT
CCTGAGCCGCACGGGGCAGCCGTTCCTGCGCGGCCGGCTGCCGATGCTGGCCGGGATGGCGCTGACCTTCGCCGTAGTCG
CGTCGCTGGCGTCCGCCGGCGGCGCCTGGGCCGTGCGCGCCAATGCCTACGGCCGCATCGGTGCGCTGGCGCTGCTGGCC
TTGTTCGGGCTCTCGCTGCTCTTGCCCAAGGTGGCGGACACGCTCGCCCGCCCGGCCGTGGCGCTCGGCAACCGGCTGGC
AGGCCGCGCCGGGTCGAATGGCGAGGCATCGGCTTCACCGTGGGGCTCGCTGCTGCTCGGCATCGCCACCGGCATGCTGT
GGGCGCCTTGCGCGGGGCCGATCCTGGGTCTCGTGCTCACTGGCGCCGCGCTGAACGGCGCCAGCGTATCAACGTCGCTG
GCGCTCGCGGCCTATGCCGCCGGTGCGGCGACGTCGCTCGCGGCCGCGCTTGGCCTCGGCGGCCGGGTTTTCGCGGCCAT
GAAGCGGAGCCTGGGCGCCAGCGAATGGCTGCGCCGCGGTCTGGGCGCAGGCGTGCTCGGGAGCGTGGTGATCATCGGGC
TGGGCGCCGACACCGGCCTGCTGGCGCGATGGTCCGCCAGCGGCCCGGCGCGTCTTGAGCAGGCACTGGTTGACGCGCTG
CACAAGGACCGCCCGGCGCCGCAGGCGGCCAATGAAGTACCGGCTCCCGGCAACGGCATGCTGCTGGCCGCCAACGACAC
GCGCGTCGGTTTCCCGACTCCCCTGCCGGCCCTCCCTGTAGAAGGCCGGTTACCCGCCCTCGACGGCGCGGTGCAATGGC
TCAACTCGCCGCCGCTGTCGCGCGAGCAGCTGCAGGGCAAGGTCACGCTGGTCTACTTCTGGACCTATTCCTGCATCAAC
TGCATTCGTACCCTGCCCTACCTTCGTGCGTGGGCGGACAAGTACAAGGATCAGGGCCTGACCGTCGTCGGTGTGCATAC
GCCCGAGTTCGCGTTCGAAAGATCGACGGATAACGTCCGGCGCGCGGTGGCGGACTTCCGCATTGGCTTTCCCGTGGCCG
TCGACAGCGACTACCGCATCTGGCGCGCGTTCCACAACAGCTACTGGCCCGCCGCGTACTTTGTCGATGCGCGCGGCAAT
ATCCGCCACCACCAGTTCGGCGAGGGCGATTACGCGAAATCCGAACGCGTCATCCAGACGCTGCTGACGGAAGCCGGTAG
CCGTGCGGTGGCCGGCGATGTCGTCTCCCCCGATGCCGCCGGTGCACAGGCGGCGCCGGACCTGCACAACGTGCGCTCCG
AAGAAACCTATATCGGCTACAGCCAGGCAACGAACTTCGCCTCGCCGGGCGAGGTGCGGCCCGACGCTTCTCGGCAGTAC
ACCGTTGGCAAGCTGCTCCTGAACGAGTGGGGCTTGTCGGGCCAATGGACGGTCGGCCCCGAGCAGGCGACGCTGGATCG
GGCCGACGGCACCATCCGCTACCGCTTCCATGCACGCGACCTGCATCTGGTACTGGGGCCGGCAGCCAATGGCCAGGCCG
TCCGCTTCGTCGTGACGATCGACGGCAAGCCGCCGGGCAAGAGCCATGGTGCCGACACGGACGCCGGCGGCAATGGCGCC
GTCACGCAGACGCGGCTCTACCAGCTTGTGCGGCAGGCTGGCGAAGTCGGGGAGCATACGTTCGAGATCCGCTTCCTGGA
CGCTGGCGCGCAGGCCTACGCCTTCACTTTCGGCTAG

Upstream 100 bases:

>100_bases
GGCCAGGGCTGCACAAAGCGGTACAAAACCGCCGGTTGGCGACACATGCCGGCCACGCGAAGGGAGTCTGATTGGGCCAA
GCCAACAAACGGACCGCATC

Downstream 100 bases:

>100_bases
CCGCCGGGCCGCTCAGCAGCTGATTCGCCAACGGAATCCACGCAATCCGCAGCCACGAATCGCCGCTTCGGTGCCGACCT
GCAACGGTCTGGCCACGAAA

Product: cytochrome c biogenesis protein, transmembrane region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 598; Mature: 597

Protein sequence:

>598_residues
MTLLILAYLGGALTILSPCILPVLPFVLSRTGQPFLRGRLPMLAGMALTFAVVASLASAGGAWAVRANAYGRIGALALLA
LFGLSLLLPKVADTLARPAVALGNRLAGRAGSNGEASASPWGSLLLGIATGMLWAPCAGPILGLVLTGAALNGASVSTSL
ALAAYAAGAATSLAAALGLGGRVFAAMKRSLGASEWLRRGLGAGVLGSVVIIGLGADTGLLARWSASGPARLEQALVDAL
HKDRPAPQAANEVPAPGNGMLLAANDTRVGFPTPLPALPVEGRLPALDGAVQWLNSPPLSREQLQGKVTLVYFWTYSCIN
CIRTLPYLRAWADKYKDQGLTVVGVHTPEFAFERSTDNVRRAVADFRIGFPVAVDSDYRIWRAFHNSYWPAAYFVDARGN
IRHHQFGEGDYAKSERVIQTLLTEAGSRAVAGDVVSPDAAGAQAAPDLHNVRSEETYIGYSQATNFASPGEVRPDASRQY
TVGKLLLNEWGLSGQWTVGPEQATLDRADGTIRYRFHARDLHLVLGPAANGQAVRFVVTIDGKPPGKSHGADTDAGGNGA
VTQTRLYQLVRQAGEVGEHTFEIRFLDAGAQAYAFTFG

Sequences:

>Translated_598_residues
MTLLILAYLGGALTILSPCILPVLPFVLSRTGQPFLRGRLPMLAGMALTFAVVASLASAGGAWAVRANAYGRIGALALLA
LFGLSLLLPKVADTLARPAVALGNRLAGRAGSNGEASASPWGSLLLGIATGMLWAPCAGPILGLVLTGAALNGASVSTSL
ALAAYAAGAATSLAAALGLGGRVFAAMKRSLGASEWLRRGLGAGVLGSVVIIGLGADTGLLARWSASGPARLEQALVDAL
HKDRPAPQAANEVPAPGNGMLLAANDTRVGFPTPLPALPVEGRLPALDGAVQWLNSPPLSREQLQGKVTLVYFWTYSCIN
CIRTLPYLRAWADKYKDQGLTVVGVHTPEFAFERSTDNVRRAVADFRIGFPVAVDSDYRIWRAFHNSYWPAAYFVDARGN
IRHHQFGEGDYAKSERVIQTLLTEAGSRAVAGDVVSPDAAGAQAAPDLHNVRSEETYIGYSQATNFASPGEVRPDASRQY
TVGKLLLNEWGLSGQWTVGPEQATLDRADGTIRYRFHARDLHLVLGPAANGQAVRFVVTIDGKPPGKSHGADTDAGGNGA
VTQTRLYQLVRQAGEVGEHTFEIRFLDAGAQAYAFTFG
>Mature_597_residues
TLLILAYLGGALTILSPCILPVLPFVLSRTGQPFLRGRLPMLAGMALTFAVVASLASAGGAWAVRANAYGRIGALALLAL
FGLSLLLPKVADTLARPAVALGNRLAGRAGSNGEASASPWGSLLLGIATGMLWAPCAGPILGLVLTGAALNGASVSTSLA
LAAYAAGAATSLAAALGLGGRVFAAMKRSLGASEWLRRGLGAGVLGSVVIIGLGADTGLLARWSASGPARLEQALVDALH
KDRPAPQAANEVPAPGNGMLLAANDTRVGFPTPLPALPVEGRLPALDGAVQWLNSPPLSREQLQGKVTLVYFWTYSCINC
IRTLPYLRAWADKYKDQGLTVVGVHTPEFAFERSTDNVRRAVADFRIGFPVAVDSDYRIWRAFHNSYWPAAYFVDARGNI
RHHQFGEGDYAKSERVIQTLLTEAGSRAVAGDVVSPDAAGAQAAPDLHNVRSEETYIGYSQATNFASPGEVRPDASRQYT
VGKLLLNEWGLSGQWTVGPEQATLDRADGTIRYRFHARDLHLVLGPAANGQAVRFVVTIDGKPPGKSHGADTDAGGNGAV
TQTRLYQLVRQAGEVGEHTFEIRFLDAGAQAYAFTFG

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42476013, Length=133, Percent_Identity=36.8421052631579, Blast_Score=99, Evalue=9e-21,
Organism=Drosophila melanogaster, GI116007528, Length=125, Percent_Identity=36, Blast_Score=86, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR003834
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 62837; Mature: 62706

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLILAYLGGALTILSPCILPVLPFVLSRTGQPFLRGRLPMLAGMALTFAVVASLASAG
CEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCC
GAWAVRANAYGRIGALALLALFGLSLLLPKVADTLARPAVALGNRLAGRAGSNGEASASP
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCH
WGSLLLGIATGMLWAPCAGPILGLVLTGAALNGASVSTSLALAAYAAGAATSLAAALGLG
HHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GRVFAAMKRSLGASEWLRRGLGAGVLGSVVIIGLGADTGLLARWSASGPARLEQALVDAL
HHHHHHHHHHCCHHHHHHHCCCCCHHHEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHH
HKDRPAPQAANEVPAPGNGMLLAANDTRVGFPTPLPALPVEGRLPALDGAVQWLNSPPLS
HCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
REQLQGKVTLVYFWTYSCINCIRTLPYLRAWADKYKDQGLTVVGVHTPEFAFERSTDNVR
HHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHCCCCHHHHH
RAVADFRIGFPVAVDSDYRIWRAFHNSYWPAAYFVDARGNIRHHQFGEGDYAKSERVIQT
HHHHHHHCCCCEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH
LLTEAGSRAVAGDVVSPDAAGAQAAPDLHNVRSEETYIGYSQATNFASPGEVRPDASRQY
HHHHCCCCEEECCCCCCCCCCCCCCCHHHHCCCCCEEEEHHHCCCCCCCCCCCCCCCCCH
TVGKLLLNEWGLSGQWTVGPEQATLDRADGTIRYRFHARDLHLVLGPAANGQAVRFVVTI
HHHHHHHHHCCCCCEEECCCCHHHHCCCCCEEEEEEEECEEEEEECCCCCCCEEEEEEEE
DGKPPGKSHGADTDAGGNGAVTQTRLYQLVRQAGEVGEHTFEIRFLDAGAQAYAFTFG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEECC
>Mature Secondary Structure 
TLLILAYLGGALTILSPCILPVLPFVLSRTGQPFLRGRLPMLAGMALTFAVVASLASAG
EEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCC
GAWAVRANAYGRIGALALLALFGLSLLLPKVADTLARPAVALGNRLAGRAGSNGEASASP
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCH
WGSLLLGIATGMLWAPCAGPILGLVLTGAALNGASVSTSLALAAYAAGAATSLAAALGLG
HHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GRVFAAMKRSLGASEWLRRGLGAGVLGSVVIIGLGADTGLLARWSASGPARLEQALVDAL
HHHHHHHHHHCCHHHHHHHCCCCCHHHEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHH
HKDRPAPQAANEVPAPGNGMLLAANDTRVGFPTPLPALPVEGRLPALDGAVQWLNSPPLS
HCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
REQLQGKVTLVYFWTYSCINCIRTLPYLRAWADKYKDQGLTVVGVHTPEFAFERSTDNVR
HHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHCCCCHHHHH
RAVADFRIGFPVAVDSDYRIWRAFHNSYWPAAYFVDARGNIRHHQFGEGDYAKSERVIQT
HHHHHHHCCCCEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH
LLTEAGSRAVAGDVVSPDAAGAQAAPDLHNVRSEETYIGYSQATNFASPGEVRPDASRQY
HHHHCCCCEEECCCCCCCCCCCCCCCHHHHCCCCCEEEEHHHCCCCCCCCCCCCCCCCCH
TVGKLLLNEWGLSGQWTVGPEQATLDRADGTIRYRFHARDLHLVLGPAANGQAVRFVVTI
HHHHHHHHHCCCCCEEECCCCHHHHCCCCCEEEEEEEECEEEEEECCCCCCCEEEEEEEE
DGKPPGKSHGADTDAGGNGAVTQTRLYQLVRQAGEVGEHTFEIRFLDAGAQAYAFTFG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]