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The map label for this gene is ocd2 [H]

Identifier: 73537596

GI number: 73537596

Start: 358055

End: 358987

Strand: Direct

Name: ocd2 [H]

Synonym: Reut_B3761

Alternate gene names: 73537596

Gene position: 358055-358987 (Clockwise)

Preceding gene: 73537591

Following gene: 73537597

Centisome position: 13.13

GC content: 68.27

Gene sequence:

>933_bases
ATGCAGCACATCACAGACGCGATGATCGACGCCCACGTCAGTCCCGAAGACGCCCGGCAAGTCATGGAAGCGGCGTTTGC
CAGCTTTGGCCGGGGCGATGCGGCCATGCAGGAGCGCATCCGCACCGAGGCGGGTGGCGTCAAATTGTCCACGCTGGGCG
CGGTGATTCCGCAGCAGGGTTTTGCAGGCGCCAAGGTTTACACCACCATCAACGGCCAGTTCTCTTTTGTCATTCTGATC
TTCTCGACGGAGGACGGCCGTCCGCTTGCGTCATTCGATGCGGGCGCCATCACGCGCCTGCGGACGGCCGCGTGCACCAC
GCTTGCGGCGCAGCGGCTTGTGCGGCCGGGCGCGCGCACGCTGGCGCTTTTCGGCGCCGGCACGCAGGGCGTTCAGCACG
CGCGCCAGCTCAGCGCCACGCTGGGGCTCCAACGCATCCTCGTGTCCGATCCGCATGCCGATGCCGGCATGCCCGCACGC
CTGTCGGCGCAATGCGGCATTCCGGTTGTAGTGTCCGAGCCCGATGCTGCGGTGGCCGAGGCCGATATCGTGGTCACCGC
CTCGCGCGCGACCACGCCGCTGTTCGCGGGTGCGTCGCTGCGGCCGGGCGCCTTCGTAGCCGCCATCGGCTCAAGCCTGC
CGCATACGCGCGAACTCGACGACACGGCGCTGCGTCGGGCCGCCGCCGTGGTGGTCGAGTGGCGTCCGCAATCCACGCGC
GAGGCCGGCGACATCGTACTGGCCGATCCGCAAGCGCTGCCGACGGAAAAGATCGTCGAGCTCGGCGACGTCGTGCTCGG
CAAGGTTTCGCCGCGACAGCGCGACGACGACATCGTCATCTACAAGTCCGTGGGTGTCGGCCTGGAGGACGTTGCGTTGG
CCGGTTTTGCGTGGTCGCGCATTGCCGGCGCAGTGGAGCTTCGCGTCGCCTGA

Upstream 100 bases:

>100_bases
CTGGACGGAACAGCGTGCCTCACGGATGAGCATGAGGCGTGCCTGGAACCAGACCCCGGTCTTCCGTCCTGACAACCCAA
ACCCAACCAGCGGAGCCCCC

Downstream 100 bases:

>100_bases
TTCATCTACGGCTCTTGCCGGGTAAACCCCGGCGTGACGAGTCAACGAAGCGCTTGCCGTCCCGCATTAATTGTATATAG
TATACAAGAATGCCGATGCG

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MQHITDAMIDAHVSPEDARQVMEAAFASFGRGDAAMQERIRTEAGGVKLSTLGAVIPQQGFAGAKVYTTINGQFSFVILI
FSTEDGRPLASFDAGAITRLRTAACTTLAAQRLVRPGARTLALFGAGTQGVQHARQLSATLGLQRILVSDPHADAGMPAR
LSAQCGIPVVVSEPDAAVAEADIVVTASRATTPLFAGASLRPGAFVAAIGSSLPHTRELDDTALRRAAAVVVEWRPQSTR
EAGDIVLADPQALPTEKIVELGDVVLGKVSPRQRDDDIVIYKSVGVGLEDVALAGFAWSRIAGAVELRVA

Sequences:

>Translated_310_residues
MQHITDAMIDAHVSPEDARQVMEAAFASFGRGDAAMQERIRTEAGGVKLSTLGAVIPQQGFAGAKVYTTINGQFSFVILI
FSTEDGRPLASFDAGAITRLRTAACTTLAAQRLVRPGARTLALFGAGTQGVQHARQLSATLGLQRILVSDPHADAGMPAR
LSAQCGIPVVVSEPDAAVAEADIVVTASRATTPLFAGASLRPGAFVAAIGSSLPHTRELDDTALRRAAAVVVEWRPQSTR
EAGDIVLADPQALPTEKIVELGDVVLGKVSPRQRDDDIVIYKSVGVGLEDVALAGFAWSRIAGAVELRVA
>Mature_310_residues
MQHITDAMIDAHVSPEDARQVMEAAFASFGRGDAAMQERIRTEAGGVKLSTLGAVIPQQGFAGAKVYTTINGQFSFVILI
FSTEDGRPLASFDAGAITRLRTAACTTLAAQRLVRPGARTLALFGAGTQGVQHARQLSATLGLQRILVSDPHADAGMPAR
LSAQCGIPVVVSEPDAAVAEADIVVTASRATTPLFAGASLRPGAFVAAIGSSLPHTRELDDTALRRAAAVVVEWRPQSTR
EAGDIVLADPQALPTEKIVELGDVVLGKVSPRQRDDDIVIYKSVGVGLEDVALAGFAWSRIAGAVELRVA

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI62241008, Length=225, Percent_Identity=31.5555555555556, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI4503065, Length=225, Percent_Identity=31.5555555555556, Blast_Score=102, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 32426; Mature: 32426

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHITDAMIDAHVSPEDARQVMEAAFASFGRGDAAMQERIRTEAGGVKLSTLGAVIPQQG
CCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEHHHHHCCCCC
FAGAKVYTTINGQFSFVILIFSTEDGRPLASFDAGAITRLRTAACTTLAAQRLVRPGART
CCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
LALFGAGTQGVQHARQLSATLGLQRILVSDPHADAGMPARLSAQCGIPVVVSEPDAAVAE
EEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEECCCCCEEEECCCCCCCEE
ADIVVTASRATTPLFAGASLRPGAFVAAIGSSLPHTRELDDTALRRAAAVVVEWRPQSTR
CEEEEEECCCCCCEEECCCCCCCHHHEECCCCCCCCCCCHHHHHHHHEEEEEEECCCCCC
EAGDIVLADPQALPTEKIVELGDVVLGKVSPRQRDDDIVIYKSVGVGLEDVALAGFAWSR
CCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
IAGAVELRVA
HCCEEEEEEC
>Mature Secondary Structure
MQHITDAMIDAHVSPEDARQVMEAAFASFGRGDAAMQERIRTEAGGVKLSTLGAVIPQQG
CCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEHHHHHCCCCC
FAGAKVYTTINGQFSFVILIFSTEDGRPLASFDAGAITRLRTAACTTLAAQRLVRPGART
CCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
LALFGAGTQGVQHARQLSATLGLQRILVSDPHADAGMPARLSAQCGIPVVVSEPDAAVAE
EEEECCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEECCCCCEEEECCCCCCCEE
ADIVVTASRATTPLFAGASLRPGAFVAAIGSSLPHTRELDDTALRRAAAVVVEWRPQSTR
CEEEEEECCCCCCEEECCCCCCCHHHEECCCCCCCCCCCHHHHHHHHEEEEEEECCCCCC
EAGDIVLADPQALPTEKIVELGDVVLGKVSPRQRDDDIVIYKSVGVGLEDVALAGFAWSR
CCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
IAGAVELRVA
HCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]