| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is yfiQ [C]
Identifier: 73537537
GI number: 73537537
Start: 287233
End: 289410
Strand: Direct
Name: yfiQ [C]
Synonym: Reut_B3702
Alternate gene names: 73537537
Gene position: 287233-289410 (Clockwise)
Preceding gene: 73537536
Following gene: 73537538
Centisome position: 10.54
GC content: 70.02
Gene sequence:
>2178_bases ATGGTTGACCTGAATTCCCTGCTGTATCCGCGTTCGATCGCCGTGATTGGTGCTTCTACCCAGCCGGACAAAGTGGGCGG CATGCCCATCCGGCTGCTGCGCGAACTGGGCTATGCGGGACGCATCTATCCGGTCAACGCATCAGCGGCCGAAGTGCAGG GCTTGCCTGCCTATGGCTCGCTGTCAGATATCGGCGAACCGGTCGACCTGGCCATCATCGCGGTGCCGGCCAGCGCCAGC CAGGACGTGATGGCACAGCTTGCCGGCAACGGCACGCGCGCAGCGGTGGTGTTCACTTCAGGCTTCGCCGAGGCGGGCGG CGCCGGCGTGCAGATGCAGGAGCGCCTGGCCCGCAGCGCGCAGCAAGCCGGCATCACACTGCTGGGCCCCAACTGCCTTG GCGCCATGAATCTGCGCGAACGCGTGTTCGCCACGTTCTCGCCGATTGCGCTGAGCGGTACGCCGCCGGTCGGCGAAGTG GGCCTGGTGAGCCAGAGCGGGGCGTTCGGCGCCTATGCTTTTGCGCTCGCGCGTGAAGCGGGCCTCGGCCTGAGCCACTG GGTCACGACCGGCAACGAGGCCGGGCTGCAGGTGGCCGATGTGATCGAGTGGCTTGCCCATGATCCGAACACCCGCGTGA TCCTCGCCTATATCGAAGGCTGTCGCGATGGCGCCCGCCTGCGCCGGGCACTCGCCGCCGCGCGTGCAGCCGGCAAGCCG GTTGTAGTTACCAAGGTGGGCACGACCGAAGCCGGGGCACGTTCGGCGCAGTCGCATACGGCCAGCCTGGCCGGCGAAGA CGCGGTGTACCAGGCGGTGTTCGAAGCGTACGGCGTGCACCGCGCCCATACGCTGGAAGAGTTCTTCCGGCTCGGCTATG TGCTGTCGCGCGGCCGACGGCCGGCCACGTGGCAGCGCACCAGCGGTGGTGACGCCGATGTGGGCACGCCGCTGGGCATC GTCACGGTGTCGGGCGGCGTGGGCATCATGATGGCGGACCGCGCCGAAGAACTCGGCCTACCGCTGCCGCCGATGCCCGA CGACGCGGCCGCGGCACTGCGTACCGCGATACCGTTCGCGAGTACCGCCAATCCGATCGACGTCACGGGGCAGATCGTGG CGCAGCCGCGCGTTTTCATGGACGCCATCGCCGACGTGGCGCGCAGTGGCGCCTACGGCAGCGTGGCGGTCTTTCTCGCC GGCGGCGCTAATGCCCCGCGGTTCTGGCCGGAGTTGCAGCAAGCCATCGGCGCGCTGAGCGAAGCGGCGGACGCCGCGCC GCTGATGGTGTCCGGCCTCGTCGATGACGACAAGCGCGCCTGGCTCGAAGCGCGCGGCTGCCTGGTGTTCCGCGAACCGG GCCATGCGGTCGAAGCGGTCGCCACGCTGGCGCGTGCGGCCGCGCTCGAAGACGCGCGCGGAGATGACGCGATTGAGGGG CAAGCACAATCCGATCCGCAGGACGACCTGCTGCGCGACATTCCGCCAGCTGCCACCGCGCTGTCCGAGTACGAGGCCAT GCGTCTGCTCGCCGAGGCCGGCGTACCGGTCGCCCCGCACGACCTCGCACGTGACGCTGAAGAGGCCGTGCGCATTGCCG AACGTCTCGGCTACCCCGTCGTCGTCAAGCTGTGCTCGCGCGAGATCCTGCACAAGAGCGATGTGGGCGGCGTGGCGCTC AACCTCGCCAACGCGCAGGCGGTGCGCGATGCCTTTGGCCGCATGGCGCAGGCCGTGGCCGGTCTGCGCACGGACAAAGG CACACCGGTCGCGCTCGACGGCGTGCTGGTAGCGCGCATGGTGCGGGGCTGGGGCGAGGTCATGGTCGGCGTGCGGCGCG ATCCGGTATTCGGCCTGGTCGCGCTGGCCGGCATCGGCGGCACGGCCGTCGAGATCTTCCGCCAGACCGCCTGCGGACTG GCGCCGCTGTCGCGCGAACAGGCGCGCGCCATGCTGCACGCGAGCCGCGTCGCCGCGCTGTGCGAAGGGCACCGGGGCCA CCCGCAGGTGGACCTGAACGCTGCCGCGCAGGTGCTGGCCAGCGTGTCGCAGCTTGCCGCGGAGTTGGGCGACCGGCTTG ACACGATCGAGATCAATCCGTTCATCGTCACCGCGCCGGGACTGGTCGCCGCCGATGCGGTCGTCACGCTTCGCGCGGAC AGCCACGGCGCACTGTAG
Upstream 100 bases:
>100_bases GCTGATGGAAATGGTCCGCTCCATCGAGGCGGCCACCGGCCTGCAGCAATAGCGGCTGACGCCCAACATCCACAACAAGA CCCGCATTGGAGACGCTCGT
Downstream 100 bases:
>100_bases CGAACGCAATCCCATCCGAAGAAAAGGAGTCAGGATGCCCGCACAGACAGGCACCGGCTCCGCAGCAGACCCTCAATAAA ACAGGAGACAAAACATGCAA
Product: CoA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 725; Mature: 725
Protein sequence:
>725_residues MVDLNSLLYPRSIAVIGASTQPDKVGGMPIRLLRELGYAGRIYPVNASAAEVQGLPAYGSLSDIGEPVDLAIIAVPASAS QDVMAQLAGNGTRAAVVFTSGFAEAGGAGVQMQERLARSAQQAGITLLGPNCLGAMNLRERVFATFSPIALSGTPPVGEV GLVSQSGAFGAYAFALAREAGLGLSHWVTTGNEAGLQVADVIEWLAHDPNTRVILAYIEGCRDGARLRRALAAARAAGKP VVVTKVGTTEAGARSAQSHTASLAGEDAVYQAVFEAYGVHRAHTLEEFFRLGYVLSRGRRPATWQRTSGGDADVGTPLGI VTVSGGVGIMMADRAEELGLPLPPMPDDAAAALRTAIPFASTANPIDVTGQIVAQPRVFMDAIADVARSGAYGSVAVFLA GGANAPRFWPELQQAIGALSEAADAAPLMVSGLVDDDKRAWLEARGCLVFREPGHAVEAVATLARAAALEDARGDDAIEG QAQSDPQDDLLRDIPPAATALSEYEAMRLLAEAGVPVAPHDLARDAEEAVRIAERLGYPVVVKLCSREILHKSDVGGVAL NLANAQAVRDAFGRMAQAVAGLRTDKGTPVALDGVLVARMVRGWGEVMVGVRRDPVFGLVALAGIGGTAVEIFRQTACGL APLSREQARAMLHASRVAALCEGHRGHPQVDLNAAAQVLASVSQLAAELGDRLDTIEINPFIVTAPGLVAADAVVTLRAD SHGAL
Sequences:
>Translated_725_residues MVDLNSLLYPRSIAVIGASTQPDKVGGMPIRLLRELGYAGRIYPVNASAAEVQGLPAYGSLSDIGEPVDLAIIAVPASAS QDVMAQLAGNGTRAAVVFTSGFAEAGGAGVQMQERLARSAQQAGITLLGPNCLGAMNLRERVFATFSPIALSGTPPVGEV GLVSQSGAFGAYAFALAREAGLGLSHWVTTGNEAGLQVADVIEWLAHDPNTRVILAYIEGCRDGARLRRALAAARAAGKP VVVTKVGTTEAGARSAQSHTASLAGEDAVYQAVFEAYGVHRAHTLEEFFRLGYVLSRGRRPATWQRTSGGDADVGTPLGI VTVSGGVGIMMADRAEELGLPLPPMPDDAAAALRTAIPFASTANPIDVTGQIVAQPRVFMDAIADVARSGAYGSVAVFLA GGANAPRFWPELQQAIGALSEAADAAPLMVSGLVDDDKRAWLEARGCLVFREPGHAVEAVATLARAAALEDARGDDAIEG QAQSDPQDDLLRDIPPAATALSEYEAMRLLAEAGVPVAPHDLARDAEEAVRIAERLGYPVVVKLCSREILHKSDVGGVAL NLANAQAVRDAFGRMAQAVAGLRTDKGTPVALDGVLVARMVRGWGEVMVGVRRDPVFGLVALAGIGGTAVEIFRQTACGL APLSREQARAMLHASRVAALCEGHRGHPQVDLNAAAQVLASVSQLAAELGDRLDTIEINPFIVTAPGLVAADAVVTLRAD SHGAL >Mature_725_residues MVDLNSLLYPRSIAVIGASTQPDKVGGMPIRLLRELGYAGRIYPVNASAAEVQGLPAYGSLSDIGEPVDLAIIAVPASAS QDVMAQLAGNGTRAAVVFTSGFAEAGGAGVQMQERLARSAQQAGITLLGPNCLGAMNLRERVFATFSPIALSGTPPVGEV GLVSQSGAFGAYAFALAREAGLGLSHWVTTGNEAGLQVADVIEWLAHDPNTRVILAYIEGCRDGARLRRALAAARAAGKP VVVTKVGTTEAGARSAQSHTASLAGEDAVYQAVFEAYGVHRAHTLEEFFRLGYVLSRGRRPATWQRTSGGDADVGTPLGI VTVSGGVGIMMADRAEELGLPLPPMPDDAAAALRTAIPFASTANPIDVTGQIVAQPRVFMDAIADVARSGAYGSVAVFLA GGANAPRFWPELQQAIGALSEAADAAPLMVSGLVDDDKRAWLEARGCLVFREPGHAVEAVATLARAAALEDARGDDAIEG QAQSDPQDDLLRDIPPAATALSEYEAMRLLAEAGVPVAPHDLARDAEEAVRIAERLGYPVVVKLCSREILHKSDVGGVAL NLANAQAVRDAFGRMAQAVAGLRTDKGTPVALDGVLVARMVRGWGEVMVGVRRDPVFGLVALAGIGGTAVEIFRQTACGL APLSREQARAMLHASRVAALCEGHRGHPQVDLNAAAQVLASVSQLAAELGDRLDTIEINPFIVTAPGLVAADAVVTLRAD SHGAL
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfiQ [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=737, Percent_Identity=26.729986431479, Blast_Score=189, Evalue=4e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014089 - InterPro: IPR013650 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR005809 - InterPro: IPR016102 [H]
Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 75107; Mature: 75107
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDLNSLLYPRSIAVIGASTQPDKVGGMPIRLLRELGYAGRIYPVNASAAEVQGLPAYGS CCCCHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCC LSDIGEPVDLAIIAVPASASQDVMAQLAGNGTRAAVVFTSGFAEAGGAGVQMQERLARSA HHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH QQAGITLLGPNCLGAMNLRERVFATFSPIALSGTPPVGEVGLVSQSGAFGAYAFALAREA HHCCEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCCHHHHHHHHHHH GLGLSHWVTTGNEAGLQVADVIEWLAHDPNTRVILAYIEGCRDGARLRRALAAARAAGKP CCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCC VVVTKVGTTEAGARSAQSHTASLAGEDAVYQAVFEAYGVHRAHTLEEFFRLGYVLSRGRR EEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC PATWQRTSGGDADVGTPLGIVTVSGGVGIMMADRAEELGLPLPPMPDDAAAALRTAIPFA CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCHHHCCCCCCCCCCHHHHHHHHHCCCC STANPIDVTGQIVAQPRVFMDAIADVARSGAYGSVAVFLAGGANAPRFWPELQQAIGALS CCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH EAADAAPLMVSGLVDDDKRAWLEARGCLVFREPGHAVEAVATLARAAALEDARGDDAIEG HHCCCCCEEEECCCCCHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCC QAQSDPQDDLLRDIPPAATALSEYEAMRLLAEAGVPVAPHDLARDAEEAVRIAERLGYPV CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHH VVKLCSREILHKSDVGGVALNLANAQAVRDAFGRMAQAVAGLRTDKGTPVALDGVLVARM HHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHH VRGWGEVMVGVRRDPVFGLVALAGIGGTAVEIFRQTACGLAPLSREQARAMLHASRVAAL HHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH CEGHRGHPQVDLNAAAQVLASVSQLAAELGDRLDTIEINPFIVTAPGLVAADAVVTLRAD HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCEEECEEEEEECC SHGAL CCCCC >Mature Secondary Structure MVDLNSLLYPRSIAVIGASTQPDKVGGMPIRLLRELGYAGRIYPVNASAAEVQGLPAYGS CCCCHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCC LSDIGEPVDLAIIAVPASASQDVMAQLAGNGTRAAVVFTSGFAEAGGAGVQMQERLARSA HHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH QQAGITLLGPNCLGAMNLRERVFATFSPIALSGTPPVGEVGLVSQSGAFGAYAFALAREA HHCCEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCCHHHHHHHHHHH GLGLSHWVTTGNEAGLQVADVIEWLAHDPNTRVILAYIEGCRDGARLRRALAAARAAGKP CCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCC VVVTKVGTTEAGARSAQSHTASLAGEDAVYQAVFEAYGVHRAHTLEEFFRLGYVLSRGRR EEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC PATWQRTSGGDADVGTPLGIVTVSGGVGIMMADRAEELGLPLPPMPDDAAAALRTAIPFA CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCHHHCCCCCCCCCCHHHHHHHHHCCCC STANPIDVTGQIVAQPRVFMDAIADVARSGAYGSVAVFLAGGANAPRFWPELQQAIGALS CCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH EAADAAPLMVSGLVDDDKRAWLEARGCLVFREPGHAVEAVATLARAAALEDARGDDAIEG HHCCCCCEEEECCCCCHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCC QAQSDPQDDLLRDIPPAATALSEYEAMRLLAEAGVPVAPHDLARDAEEAVRIAERLGYPV CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHH VVKLCSREILHKSDVGGVALNLANAQAVRDAFGRMAQAVAGLRTDKGTPVALDGVLVARM HHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHH VRGWGEVMVGVRRDPVFGLVALAGIGGTAVEIFRQTACGLAPLSREQARAMLHASRVAAL HHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH CEGHRGHPQVDLNAAAQVLASVSQLAAELGDRLDTIEINPFIVTAPGLVAADAVVTLRAD HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCEEECEEEEEECC SHGAL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]