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The map label for this gene is yvoA [H]

Identifier: 73537344

GI number: 73537344

Start: 49418

End: 50248

Strand: Direct

Name: yvoA [H]

Synonym: Reut_B3509

Alternate gene names: 73537344

Gene position: 49418-50248 (Clockwise)

Preceding gene: 73537341

Following gene: 73537345

Centisome position: 1.81

GC content: 66.67

Gene sequence:

>831_bases
ATGTGCCTGGGCGGCCTTTGCAACAGACAGGCGAATCAGCCTGGACTTCCCATGCCGGAACACCCTTCGACCGAACTCCT
TTCCCGCAGCCGCCAGCCCGTCTATCTGCAGCTGGCGACCATCTTCCGTCGGCAGATCGAAAGCGGCGCCTGGGTGCCCG
GCGCGCAGATCCCGTCGCTCGACGCGCTGTGCCGCCAGTACGGCGTGGCGCGAATGACCATGCACCAGGCGCTGTCGATG
CTCGACGAGGAGGGTCTGCTGGAGCGCTCGCGGGGCCGTGGGACATTCGTCAAGGCGGGCAGCCGGACGCAGCGGCGCGT
GTCGCTATCCACTAGCTGGGACGAGGCTGTCGCCGTTGGCGATGCCATTGATACGGAAGCGTTGGTCGAATCCCGCGGGA
ACGTGGCGTTGCCCGCTGACCTTGGCCTGCCATGCAGCGGGCAGCGTGCCGCCGAATACCATTTCCTGCGCCGCCTGCAT
CGCGCAGACGGGCGGCCTTTTGCGATGTGCGAGGTGTACATCGAGGCCGGCGTCTTCGCACGCGAGCCCGATGCCTTCCG
GCATGGCGCTTCGGTGCAGGTACTCGACCGTTTTCCCGGCCTGCAGGTCAGCGCGGCGCGACAGCGCCTGACCATTGTCG
CGGCCGGGGCGGAATCCGCGGTCGGGCTCGATCTTGCCGTGGGCGCGCCAGTGGCCGAACTACGCCGCTACGCCTGCGTC
GACGATGTGATCGTCTACTACGCCCGCATCGAATTCCCCACGGAGTTCGTCTGTCTCGATTTTGATCTGCTGGCCTCCTC
CGGCCCGCAGTCTGATGCCAACCCGTCTTGA

Upstream 100 bases:

>100_bases
CGCAGACATGGTGTGGATCAAGGAGCGCTTCGGGTGGTAAACCCTAGTAGTCTAGGTTTATATACCTTTATAAAGTTTCG
GCACGCCGCCCGGCGTATAA

Downstream 100 bases:

>100_bases
ATCACGAAACCGACTCATGGAAACTTCCCAAGCGATGAACGGCGCCGAAAGCCTGGTCAAGACTCTGCTGTCCAGCGGTG
TGGATACCTGCTTTGCCAAT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MCLGGLCNRQANQPGLPMPEHPSTELLSRSRQPVYLQLATIFRRQIESGAWVPGAQIPSLDALCRQYGVARMTMHQALSM
LDEEGLLERSRGRGTFVKAGSRTQRRVSLSTSWDEAVAVGDAIDTEALVESRGNVALPADLGLPCSGQRAAEYHFLRRLH
RADGRPFAMCEVYIEAGVFAREPDAFRHGASVQVLDRFPGLQVSAARQRLTIVAAGAESAVGLDLAVGAPVAELRRYACV
DDVIVYYARIEFPTEFVCLDFDLLASSGPQSDANPS

Sequences:

>Translated_276_residues
MCLGGLCNRQANQPGLPMPEHPSTELLSRSRQPVYLQLATIFRRQIESGAWVPGAQIPSLDALCRQYGVARMTMHQALSM
LDEEGLLERSRGRGTFVKAGSRTQRRVSLSTSWDEAVAVGDAIDTEALVESRGNVALPADLGLPCSGQRAAEYHFLRRLH
RADGRPFAMCEVYIEAGVFAREPDAFRHGASVQVLDRFPGLQVSAARQRLTIVAAGAESAVGLDLAVGAPVAELRRYACV
DDVIVYYARIEFPTEFVCLDFDLLASSGPQSDANPS
>Mature_276_residues
MCLGGLCNRQANQPGLPMPEHPSTELLSRSRQPVYLQLATIFRRQIESGAWVPGAQIPSLDALCRQYGVARMTMHQALSM
LDEEGLLERSRGRGTFVKAGSRTQRRVSLSTSWDEAVAVGDAIDTEALVESRGNVALPADLGLPCSGQRAAEYHFLRRLH
RADGRPFAMCEVYIEAGVFAREPDAFRHGASVQVLDRFPGLQVSAARQRLTIVAAGAESAVGLDLAVGAPVAELRRYACV
DDVIVYYARIEFPTEFVCLDFDLLASSGPQSDANPS

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786950, Length=230, Percent_Identity=26.5217391304348, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87082252, Length=212, Percent_Identity=26.4150943396226, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 30032; Mature: 30032

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLGGLCNRQANQPGLPMPEHPSTELLSRSRQPVYLQLATIFRRQIESGAWVPGAQIPSL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCH
DALCRQYGVARMTMHQALSMLDEEGLLERSRGRGTFVKAGSRTQRRVSLSTSWDEAVAVG
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCHHHHHHC
DAIDTEALVESRGNVALPADLGLPCSGQRAAEYHFLRRLHRADGRPFAMCEVYIEAGVFA
CCCCHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHEEEHHCCCCC
REPDAFRHGASVQVLDRFPGLQVSAARQRLTIVAAGAESAVGLDLAVGAPVAELRRYACV
CCCHHHHCCCCEEEHHHCCCCEEHHHHCEEEEEEECCCCCCCEEEECCCCHHHHHHHHHH
DDVIVYYARIEFPTEFVCLDFDLLASSGPQSDANPS
HHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MCLGGLCNRQANQPGLPMPEHPSTELLSRSRQPVYLQLATIFRRQIESGAWVPGAQIPSL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCH
DALCRQYGVARMTMHQALSMLDEEGLLERSRGRGTFVKAGSRTQRRVSLSTSWDEAVAVG
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCHHHHHHC
DAIDTEALVESRGNVALPADLGLPCSGQRAAEYHFLRRLHRADGRPFAMCEVYIEAGVFA
CCCCHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHEEEHHCCCCC
REPDAFRHGASVQVLDRFPGLQVSAARQRLTIVAAGAESAVGLDLAVGAPVAELRRYACV
CCCHHHHCCCCEEEHHHCCCCEEHHHHCEEEEEEECCCCCCCEEEECCCCHHHHHHHHHH
DDVIVYYARIEFPTEFVCLDFDLLASSGPQSDANPS
HHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]