Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
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Accession | NC_007348 |
Length | 2,726,152 |
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The map label for this gene is 73537329
Identifier: 73537329
GI number: 73537329
Start: 30692
End: 32032
Strand: Direct
Name: 73537329
Synonym: Reut_B3494
Alternate gene names: NA
Gene position: 30692-32032 (Clockwise)
Preceding gene: 73537328
Following gene: 73537330
Centisome position: 1.13
GC content: 64.73
Gene sequence:
>1341_bases ATGCCGCATCCACGTCTTTCCGTGTCGCGTTCGCCGGCGAACGCCATTGCCGCGGTCGCCATCGCCATGGCCCTGGCCGG GTGCGGCGAATCGGCAAAGCTTCCGTCGGAAGCGGGCTTCGGCCCCACGCCGCAATTGCCGCCGCCCGATAAGACGCTCA TTCCAACCATCCATATCGCACCTGCAAAAGGGTGGGCGGACGGCGCGCGGCCGACGGCTGCCGAGGGTTTGTCCGTGGCG GCGTTTGCCGACAAGCTCGATCATCCGCGCTGGGTCTACGTGCTGCCCAATGGAGACGTGCTCGTTGCAGAGACCAACGC GCCGCCGAAACCGGATGACCACAAGGGCGTTCGCGGCTGGGTCATGAAGAAGGTCCAGGAGCGCGCGGGTGCGGGCACGC CCAGCGCCAACCGCATCACGCTGCTGCGGGACACCAATGGCGACGGCGTGGCCGACGAGCGTTCGGTATTCCTCAAGGAC CTGCACTCGCCGTTTGGCATGGTGCTCGTGGGCAATGACTTCTACGTGGCCGATACCGATGCCGTGCTGCGTTTTCCGTA CCAGCCAGGACAAACCAGCATCACGGCATCCCCGCAAAAGGTAGTGGACCTGCCGGCAGGCACGATCAACCACCACTGGA CCAAGAACATCATCGCGAGCCCGGATGGCAGCAAGCTCTATGTGACGGTCGGTTCAAACAGCAATGCGGGCGAGAACGGC ATCGACAAGGAGGCAGGCCGCGCCGCGATCTGGGAGGTGGATCGCAAGACCGGACAGCACCGCATCTTCGCAAGCGGCCT GCGCAATCCCAACGGCATGGCGTGGGAACCTTCAAGCGGTGCACTGTGGACCTCGGTCAACGAGAGAGACGAAATCGGCA GTGACCTCGTGCCCGACTACATCACTTCAGTCAGGGATGGCGGCTTCTATGGCTGGCCATACAGCTACTACGGCCAGCAC GTCGATACGCGCGTCAAGCCGCCCGCGCCCGACATGGTGGCCAAGGCGATCGTGCCGGACTATGCGGTCGGCGCGCATAC GGCATCGCTCGGCATGACCGGGGCCGTCGGCAACAGCCTGCCCGCGCGGTTTCAGCACGGCATGTTCGTGAGCCAGCACG GTTCGTGGAACCGCAAGCCCTTTGCTGGATACAAGGTGATCTTCGTGCCGTTCGACAACGGCCGTCCCAATGGCGCGCCG TTCGACGTTCTCACCGGCTTCGTCGGCCAGAACGGCGACGCGCAGGGCCGCCCGGTTGGCGTTGCAGTCGACAAGCGTGG AGGCCTGCTTGTGGCGGACGATGTCGGCAATACCGTATGGCGGGTGACCGGCGCGAGATAG
Upstream 100 bases:
>100_bases GTCGGGCAACGTCCTACAGCGCGCTACTTGCGCGCTGACAGAGACGGGCAAGGCGCGCACCTATAGTCAAAGCAAGGCCG CTTTGTCCGGAGGTGCCACT
Downstream 100 bases:
>100_bases CGGCTGACTGACCGGCGGTGCGGCGGCGCAGCGCGAACGGCGGTTGCGCGGTGGCTGACCGCATGGCCCGTGATGACTAT ACTTCGCCTGTCTGGCGACC
Product: L-sorbosone dehydrogenase
Products: NA
Alternate protein names: SNDH [H]
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MPHPRLSVSRSPANAIAAVAIAMALAGCGESAKLPSEAGFGPTPQLPPPDKTLIPTIHIAPAKGWADGARPTAAEGLSVA AFADKLDHPRWVYVLPNGDVLVAETNAPPKPDDHKGVRGWVMKKVQERAGAGTPSANRITLLRDTNGDGVADERSVFLKD LHSPFGMVLVGNDFYVADTDAVLRFPYQPGQTSITASPQKVVDLPAGTINHHWTKNIIASPDGSKLYVTVGSNSNAGENG IDKEAGRAAIWEVDRKTGQHRIFASGLRNPNGMAWEPSSGALWTSVNERDEIGSDLVPDYITSVRDGGFYGWPYSYYGQH VDTRVKPPAPDMVAKAIVPDYAVGAHTASLGMTGAVGNSLPARFQHGMFVSQHGSWNRKPFAGYKVIFVPFDNGRPNGAP FDVLTGFVGQNGDAQGRPVGVAVDKRGGLLVADDVGNTVWRVTGAR
Sequences:
>Translated_446_residues MPHPRLSVSRSPANAIAAVAIAMALAGCGESAKLPSEAGFGPTPQLPPPDKTLIPTIHIAPAKGWADGARPTAAEGLSVA AFADKLDHPRWVYVLPNGDVLVAETNAPPKPDDHKGVRGWVMKKVQERAGAGTPSANRITLLRDTNGDGVADERSVFLKD LHSPFGMVLVGNDFYVADTDAVLRFPYQPGQTSITASPQKVVDLPAGTINHHWTKNIIASPDGSKLYVTVGSNSNAGENG IDKEAGRAAIWEVDRKTGQHRIFASGLRNPNGMAWEPSSGALWTSVNERDEIGSDLVPDYITSVRDGGFYGWPYSYYGQH VDTRVKPPAPDMVAKAIVPDYAVGAHTASLGMTGAVGNSLPARFQHGMFVSQHGSWNRKPFAGYKVIFVPFDNGRPNGAP FDVLTGFVGQNGDAQGRPVGVAVDKRGGLLVADDVGNTVWRVTGAR >Mature_445_residues PHPRLSVSRSPANAIAAVAIAMALAGCGESAKLPSEAGFGPTPQLPPPDKTLIPTIHIAPAKGWADGARPTAAEGLSVAA FADKLDHPRWVYVLPNGDVLVAETNAPPKPDDHKGVRGWVMKKVQERAGAGTPSANRITLLRDTNGDGVADERSVFLKDL HSPFGMVLVGNDFYVADTDAVLRFPYQPGQTSITASPQKVVDLPAGTINHHWTKNIIASPDGSKLYVTVGSNSNAGENGI DKEAGRAAIWEVDRKTGQHRIFASGLRNPNGMAWEPSSGALWTSVNERDEIGSDLVPDYITSVRDGGFYGWPYSYYGQHV DTRVKPPAPDMVAKAIVPDYAVGAHTASLGMTGAVGNSLPARFQHGMFVSQHGSWNRKPFAGYKVIFVPFDNGRPNGAPF DVLTGFVGQNGDAQGRPVGVAVDKRGGLLVADDVGNTVWRVTGAR
Specific function: Converts L-sorbosone into 2-keto-L-gulonic acid (2KGA) [H]
COG id: COG2133
COG function: function code G; Glucose/sorbosone dehydrogenases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.burgdorferi BB024 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR012938 - InterPro: IPR011041 [H]
Pfam domain/function: PF07995 GSDH [H]
EC number: NA
Molecular weight: Translated: 47348; Mature: 47216
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPRLSVSRSPANAIAAVAIAMALAGCGESAKLPSEAGFGPTPQLPPPDKTLIPTIHIA CCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE PAKGWADGARPTAAEGLSVAAFADKLDHPRWVYVLPNGDVLVAETNAPPKPDDHKGVRGW CCCCCCCCCCCCHHCCCEEEEHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCCCCHHHH VMKKVQERAGAGTPSANRITLLRDTNGDGVADERSVFLKDLHSPFGMVLVGNDFYVADTD HHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCEEEEECCC AVLRFPYQPGQTSITASPQKVVDLPAGTINHHWTKNIIASPDGSKLYVTVGSNSNAGENG EEEECCCCCCCCEEECCCHHEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCC IDKEAGRAAIWEVDRKTGQHRIFASGLRNPNGMAWEPSSGALWTSVNERDEIGSDLVPDY CCHHCCCEEEEEEHHHCCCEEEEEHHCCCCCCCEECCCCCCEEECCCCHHHCCCCCCHHH ITSVRDGGFYGWPYSYYGQHVDTRVKPPAPDMVAKAIVPDYAVGAHTASLGMTGAVGNSL HHHHCCCCEECCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCC PARFQHGMFVSQHGSWNRKPFAGYKVIFVPFDNGRPNGAPFDVLTGFVGQNGDAQGRPVG CHHHHCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEE VAVDKRGGLLVADDVGNTVWRVTGAR EEEECCCCEEEEECCCCEEEEEECCC >Mature Secondary Structure PHPRLSVSRSPANAIAAVAIAMALAGCGESAKLPSEAGFGPTPQLPPPDKTLIPTIHIA CCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE PAKGWADGARPTAAEGLSVAAFADKLDHPRWVYVLPNGDVLVAETNAPPKPDDHKGVRGW CCCCCCCCCCCCHHCCCEEEEHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCCCCHHHH VMKKVQERAGAGTPSANRITLLRDTNGDGVADERSVFLKDLHSPFGMVLVGNDFYVADTD HHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCEEEEECCC AVLRFPYQPGQTSITASPQKVVDLPAGTINHHWTKNIIASPDGSKLYVTVGSNSNAGENG EEEECCCCCCCCEEECCCHHEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCC IDKEAGRAAIWEVDRKTGQHRIFASGLRNPNGMAWEPSSGALWTSVNERDEIGSDLVPDY CCHHCCCEEEEEEHHHCCCEEEEEHHCCCCCCCEECCCCCCEEECCCCHHHCCCCCCHHH ITSVRDGGFYGWPYSYYGQHVDTRVKPPAPDMVAKAIVPDYAVGAHTASLGMTGAVGNSL HHHHCCCCEECCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCC PARFQHGMFVSQHGSWNRKPFAGYKVIFVPFDNGRPNGAPFDVLTGFVGQNGDAQGRPVG CHHHHCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEE VAVDKRGGLLVADDVGNTVWRVTGAR EEEECCCCEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7574579 [H]