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The map label for this gene is 71911104

Identifier: 71911104

GI number: 71911104

Start: 1245784

End: 1248186

Strand: Reverse

Name: 71911104

Synonym: M5005_Spy_1291

Alternate gene names: NA

Gene position: 1248186-1245784 (Counterclockwise)

Preceding gene: 71911105

Following gene: 71911103

Centisome position: 67.89

GC content: 35.79

Gene sequence:

>2403_bases
ATGATTTTAGCACACTATGACTGTAAAAAAGATAAAAAGCAATCTTTAGATGAGCATTTATGGCATGTGGCCTGTTCTAG
TCGACAGGAAGCATCTATAATTGGTCAAGGAGATGTGCTTTTTTTAATTGGTCTTTACCACGACCTGGGCAAAGCTGATC
GAACCTTTCAAGATAAATTATTAAATAATCCAAATCGGCATGTTGATCACTCTTATGCAGGGGCAAAATACTTATGTTCT
ATTATTGGGCCTCATCTAAAAAACCGAGGGGTTGATAAAAATGAGAGAATGACATTCAACGAAATGGTGGGGTATGTCAT
CTCTGCTCATCATGGGATGTATGATTTATGCTACTATTTTGACGATGCTGAATATTATGGCTTTAATAAGTTTAAAAATC
GTATCAATAGAGACTTAGATGGTTATCACTATCATGAAGATATTAAAGGGTACGCTCTAAAATTAGAAAAAAAATTATGT
GATTATGGCTACAAAGATTTAAGGGAGCTTATTGATAAAGCTTTTGATAATTACCAACAAGCCATGTCTTCCTTAAACTG
GCAAGATAAGAGTGAGTGGGATTATTATCAGTCTTGTATGGTGAGACTTTACTTGTCACTCTTAAAAAACGCTGATATTT
TGGACACAGTAAATGCCTATGGCCTTAAGATAAGTCCTATGGATAAAACAGAGCGATCCTTTCTAAAACACTCCTATTTA
GCGGCCATTGAACAAAAATATGCTAGCTTTGGACAGCCAAACAATCAGTTGAACACTATTCGGACAGAAATCGCTGAGCG
TGTTAAAGAAAGAGGTAAACGAGATTCCAAGGGGATTTATCGCTTAGATTTACCGACAGGAGCTGGCAAGACTAATCTTA
GTATGCGTTATGCGTTTCACCAATTAGTTCATCACGACAAATCAAGGTTTTTTTACATAACGCCCTTTCTTTCGGTTCTT
GAGCAAAATGCTTCCGAAATTAGAAAAGTTACAGGTGACCTTGGCGTTCTAGAACACCATTCCAATGTGGTGAAACAGGC
TAATGAAGATGATGATGATAAGGACAGTTTATTGTCAGCTTATCTTAGTGATAGCTGGGACAGTCAAGTAGTCTTGACTT
CTATGGTTCAATTTTTCCAAACACTTTTCAAAACAAAATCAGCTAATCTGAGACGTTTTTCAAGTTTGATTAATAGTGTT
GTGATTCTAGATGAAGTTCAATCCCTGCCTATTGAAGTCACCACTTTGTTTAATTTAACGATGAATTTTTTAAATAAAGT
TATGGATACAACCATCGTTCTTTGCACAGCGACACAACCTGCTTATGATTCTTCAGAGATTGACCATCGTATCTGTTATG
GAGGGAACTTGGGAGAATTAGCTGAAATAGTTGAGTTAACGATTGAAGAAAAACAGATTTTTTCAAGGACAGAGCTTAGA
AAATTTGATGATAGTGATCAGAAAGTTCACTTGACTGATGTTATTAACCTTATTCTAGGTGAGGAAAACTCAGTTCTTGC
TATTTTTAATACGAAAAAAACGGTTCATAACTGCTATACTATGCTAAAAGACATGACTGATAGACCGGTCTATCAGCTTT
CGACAAATATGTGTGCGCAGCATAGACTTGACTTGATTGCTAAGATCAAAACGGAGTTACAAAATAATATCCCTATTATT
TGTATTAGCACGCAATTAATTGAAGCAGGTGTAGATGTTGATTTTCATCGCGTCATTCGTTCCTACTCAGGGATTGATTC
TATTGTTCAGGCTGCTGGACGGTGTAACCGAGAAGGCAAACGAGATAAAGGGCAAGTCACTCTTGTCAATCTGACCAATG
AAGAGGAAAATATTTCTAGGCTGACAGAAATAAAAACTAAAAAAGAAGCCACAGAATCTATTCTTCATAAGATTGGGTCT
CCAATTGATATCTCAACTTTAAACCGTGACTTTTTTGAGTATTATTATGCCAATAATCAGGGACTGATGGATTATCCTTT
GGAAGACAACCTATCAATCTACGACTATTTAAGCCTTAATATTTATCAGACGGCAAATAAAAAGTTCAAAGGTAAGTTAA
AACAAGCTTTTAAAACAGCAGGAGCCAAAATGAACCTCATCAATAATGATATGATAGGAATTCTCGTACCTTATGGCGAA
GCTGAGAAAAAATTGGCTTATTTAGAAGAATTAGGTGTGTCACATTTTTTATCAGCAAAAGATTATCAAACGATAAAATC
ATTACTAAAAGAGTTACAACCTTTTACGGTTAATGTCCGCGAGAACGATCCTCTCTTTGAGACAACAAAATCTTATCTAA
ATGGTCAGATTCTGGTTTTGACGTCGGAGTATTATGACACGGAAAGAGGAGTTAAATACGATTCAGCTAGCTTTTACTTC
TAA

Upstream 100 bases:

>100_bases
AGTTTAATTATGAGAAAAACGCTTTCTTTATTTAAAGAGTTATGTTACAATACTATTACAATCATCGTACAAATAGTGTT
ATTTTGAGAGGCATATGAGA

Downstream 100 bases:

>100_bases
CTCAAAACGAAAGAAGATTAACAAAAGGTTGTTAGAGGACCTTGTTAACCTGCCAATCATCATTAGTAATTATTATCAAT
TTAGACTATTTAATAAAATT

Product: ATP-dependent RNA helicase

Products: NA

Alternate protein names: Helicase; CRISPR-Associated Helicase Cas3 Family Protein Protein; CRISPR-Associated Helicase Cas3 Domain Protein; CRISPR-Associated HD Domain Protein; CRISPR-Associated Helicase Cas3 Domain-Containing Protein; ATP-Dependent RNA Helicase; CRISPR-Associated Helicase; DEAD/DEAH Box Helicase Domain-Containing Protein; CRISPR-Associated Helicase Cas3 Core; Crispr-Associated Hd Domain Protein; CRISPR-Associated Helicase Cas3 Family; Helicases; Cas3 Family CRISPR-Associated Helicase; Helicase-Like Protein; Helicases-Like Protein; CRISPR-Associated Helicase Cas3 Protein; Crispr-Associated Helicase Cas3 Domain Protein; ATP-Dependent Helicase; CRISPR-Associated HD Domain-Containing Protein; ATP-Dependent RNA Helicase SrmB

Number of amino acids: Translated: 800; Mature: 800

Protein sequence:

>800_residues
MILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKLLNNPNRHVDHSYAGAKYLCS
IIGPHLKNRGVDKNERMTFNEMVGYVISAHHGMYDLCYYFDDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKKLC
DYGYKDLRELIDKAFDNYQQAMSSLNWQDKSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYL
AAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHHDKSRFFYITPFLSVL
EQNASEIRKVTGDLGVLEHHSNVVKQANEDDDDKDSLLSAYLSDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLINSV
VILDEVQSLPIEVTTLFNLTMNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEEKQIFSRTELR
KFDDSDQKVHLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDMTDRPVYQLSTNMCAQHRLDLIAKIKTELQNNIPII
CISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGKRDKGQVTLVNLTNEEENISRLTEIKTKKEATESILHKIGS
PIDISTLNRDFFEYYYANNQGLMDYPLEDNLSIYDYLSLNIYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGE
AEKKLAYLEELGVSHFLSAKDYQTIKSLLKELQPFTVNVRENDPLFETTKSYLNGQILVLTSEYYDTERGVKYDSASFYF

Sequences:

>Translated_800_residues
MILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKLLNNPNRHVDHSYAGAKYLCS
IIGPHLKNRGVDKNERMTFNEMVGYVISAHHGMYDLCYYFDDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKKLC
DYGYKDLRELIDKAFDNYQQAMSSLNWQDKSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYL
AAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHHDKSRFFYITPFLSVL
EQNASEIRKVTGDLGVLEHHSNVVKQANEDDDDKDSLLSAYLSDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLINSV
VILDEVQSLPIEVTTLFNLTMNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEEKQIFSRTELR
KFDDSDQKVHLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDMTDRPVYQLSTNMCAQHRLDLIAKIKTELQNNIPII
CISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGKRDKGQVTLVNLTNEEENISRLTEIKTKKEATESILHKIGS
PIDISTLNRDFFEYYYANNQGLMDYPLEDNLSIYDYLSLNIYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGE
AEKKLAYLEELGVSHFLSAKDYQTIKSLLKELQPFTVNVRENDPLFETTKSYLNGQILVLTSEYYDTERGVKYDSASFYF
>Mature_800_residues
MILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKLLNNPNRHVDHSYAGAKYLCS
IIGPHLKNRGVDKNERMTFNEMVGYVISAHHGMYDLCYYFDDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKKLC
DYGYKDLRELIDKAFDNYQQAMSSLNWQDKSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYL
AAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFHQLVHHDKSRFFYITPFLSVL
EQNASEIRKVTGDLGVLEHHSNVVKQANEDDDDKDSLLSAYLSDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLINSV
VILDEVQSLPIEVTTLFNLTMNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEEKQIFSRTELR
KFDDSDQKVHLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDMTDRPVYQLSTNMCAQHRLDLIAKIKTELQNNIPII
CISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGKRDKGQVTLVNLTNEEENISRLTEIKTKKEATESILHKIGS
PIDISTLNRDFFEYYYANNQGLMDYPLEDNLSIYDYLSLNIYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGE
AEKKLAYLEELGVSHFLSAKDYQTIKSLLKELQPFTVNVRENDPLFETTKSYLNGQILVLTSEYYDTERGVKYDSASFYF

Specific function: Unknown

COG id: COG1203

COG function: function code R; Predicted helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92045; Mature: 92045

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKL
CEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEHHHHHHCCCCHHHHHHH
LNNPNRHVDHSYAGAKYLCSIIGPHLKNRGVDKNERMTFNEMVGYVISAHHGMYDLCYYF
CCCCCCCCCCCHHHHHHHHHHHCHHHHCCCCCCCCCEEHHHHHHHHHHHCCCCEEEHEEE
DDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKKLCDYGYKDLRELIDKAFDNYQQ
CCCHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AMSSLNWQDKSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEECCCCHHHHHHHHHHHH
AAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFH
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHH
QLVHHDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNVVKQANEDDDDKDSLLSA
HHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
YLSDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLINSVVILDEVQSLPIEVTTLFNLT
HHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHH
MNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEEKQIFSRTELR
HHHHHHHHHCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
KFDDSDQKVHLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDMTDRPVYQLSTNMCAQ
HCCCCCCEEEHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
HRLDLIAKIKTELQNNIPIICISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGK
HHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCC
RDKGQVTLVNLTNEEENISRLTEIKTKKEATESILHKIGSPIDISTLNRDFFEYYYANNQ
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCC
GLMDYPLEDNLSIYDYLSLNIYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGE
CCEECCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCC
AEKKLAYLEELGVSHFLSAKDYQTIKSLLKELQPFTVNVRENDPLFETTKSYLNGQILVL
HHHHHHHHHHHCHHHHHCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCEEEEE
TSEYYDTERGVKYDSASFYF
ECCHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKL
CEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEHHHHHHCCCCHHHHHHH
LNNPNRHVDHSYAGAKYLCSIIGPHLKNRGVDKNERMTFNEMVGYVISAHHGMYDLCYYF
CCCCCCCCCCCHHHHHHHHHHHCHHHHCCCCCCCCCEEHHHHHHHHHHHCCCCEEEHEEE
DDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKKLCDYGYKDLRELIDKAFDNYQQ
CCCHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AMSSLNWQDKSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEECCCCHHHHHHHHHHHH
AAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSKGIYRLDLPTGAGKTNLSMRYAFH
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHH
QLVHHDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNVVKQANEDDDDKDSLLSA
HHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
YLSDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLINSVVILDEVQSLPIEVTTLFNLT
HHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHH
MNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEEKQIFSRTELR
HHHHHHHHHCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
KFDDSDQKVHLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDMTDRPVYQLSTNMCAQ
HCCCCCCEEEHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
HRLDLIAKIKTELQNNIPIICISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGK
HHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCC
RDKGQVTLVNLTNEEENISRLTEIKTKKEATESILHKIGSPIDISTLNRDFFEYYYANNQ
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCC
GLMDYPLEDNLSIYDYLSLNIYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGE
CCEECCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCC
AEKKLAYLEELGVSHFLSAKDYQTIKSLLKELQPFTVNVRENDPLFETTKSYLNGQILVL
HHHHHHHHHHHCHHHHHCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCEEEEE
TSEYYDTERGVKYDSASFYF
ECCHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA