Click here to switch to the map view.

The map label for this gene is 71911103

Identifier: 71911103

GI number: 71911103

Start: 1244923

End: 1245651

Strand: Reverse

Name: 71911103

Synonym: M5005_Spy_1290

Alternate gene names: NA

Gene position: 1245651-1244923 (Counterclockwise)

Preceding gene: 71911104

Following gene: 71911102

Centisome position: 67.75

GC content: 39.09

Gene sequence:

>729_bases
TTGTACAGATCTAGAGACTTCTACGTGAGAGTAAGTGGTCAGCGAGCTCTTTTTACAAATCCAGCCACAAAAGGGGGATC
GGAACGCTCATCCTATTCGGTTCCGACTAGACAGGCACTGAATGGTATCGTTGATGCCATCTATTATAAGCCGACCTTTA
CTAATATCGTCACAGAGGTTAAGGTTATTAACCAGATTCAAACCGAATTACAGGGTGTCAGGGCTCTGTTACATGATTAT
AGTGCAGATTTAAGTTATGTATCCTATTTGAGTGATGTTGTTTATCTGATCAAGTTTCATTTTGTTTGGAATGAAGATAG
AAAAGATTTGAACTCAGATAGACTTCCAGCTAAACATGAAGCCATTATGGAGCGTTCTATTCGTAAAGGGGGACGTCGAG
ATGTGTTTTTGGGTACAAGAGAATGTTTAGGGCTTGTAGATGATATCAGCCAAGAAGAGTATGAGACTACTGTGTCGTAT
TATAATGGTGTCAATATCGACTTGGGAATCATGTTCCATTCCTTTGCCTATCCGAAGGACAAAAAGACACCATTAAAATC
ATACTTTACAAAGACTGTGATGAAAAATGGAGTCATTACGTTTAAAGCACAGTCTGAATGCGATATTGTTAACACGCTTT
CTAGTTATGCTTTTAAAGCACCAGAGGAGATAAAATCGGTTAACGATGAATGCATGGAGTATGATGCCATGGAGAAAGGA
GAAAACTGA

Upstream 100 bases:

>100_bases
TAGAGGACCTTGTTAACCTGCCAATCATCATTAGTAATTATTATCAATTTAGACTATTTAATAAAATTAGATTACAAAAA
AACAGAAGGAGGAAAGTAGC

Downstream 100 bases:

>100_bases
TGGATTTTTTTACTTCTCTCTTGAAGACTTATGAAAAAGCAGAGCTAGCAGACTTGGTTGATCATCAAAAAAGAAATAAT
GAGCCGGTTTTACTGCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Dvulg Subtype; CRISPR-Associated Family; CRISPR-Associated Cas5d Family Protein; Cytoplasmic Protein; Cas5 Family CRISPR-Associated Protein; Crispr-Associated Protein; CRISPR-Associated Protein; CRISPR-Associated Csd1 Family Protein

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MYRSRDFYVRVSGQRALFTNPATKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEVKVINQIQTELQGVRALLHDY
SADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRECLGLVDDISQEEYETTVSY
YNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKG
EN

Sequences:

>Translated_242_residues
MYRSRDFYVRVSGQRALFTNPATKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEVKVINQIQTELQGVRALLHDY
SADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRECLGLVDDISQEEYETTVSY
YNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKG
EN
>Mature_242_residues
MYRSRDFYVRVSGQRALFTNPATKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEVKVINQIQTELQGVRALLHDY
SADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRECLGLVDDISQEEYETTVSY
YNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKG
EN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27729; Mature: 27729

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRSRDFYVRVSGQRALFTNPATKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEV
CCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
KVINQIQTELQGVRALLHDYSADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCHHCCCCCCCCHHHH
AIMERSIRKGGRRDVFLGTRECLGLVDDISQEEYETTVSYYNGVNIDLGIMFHSFAYPKD
HHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCC
KKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKG
CCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
EN
CC
>Mature Secondary Structure
MYRSRDFYVRVSGQRALFTNPATKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEV
CCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
KVINQIQTELQGVRALLHDYSADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCHHCCCCCCCCHHHH
AIMERSIRKGGRRDVFLGTRECLGLVDDISQEEYETTVSYYNGVNIDLGIMFHSFAYPKD
HHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCC
KKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKG
CCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
EN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA