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The map label for this gene is 71910985

Identifier: 71910985

GI number: 71910985

Start: 1148981

End: 1149208

Strand: Reverse

Name: 71910985

Synonym: M5005_Spy_1172

Alternate gene names: NA

Gene position: 1149208-1148981 (Counterclockwise)

Preceding gene: 71910986

Following gene: 71910984

Centisome position: 62.51

GC content: 39.47

Gene sequence:

>228_bases
ATGATCAATTTAAAATTACGACTACAAAACAAAGTAACCTTGATGGCTATTTTGGGAGCTATCTTTTTGTTAGCGCAACA
ATTAGGTATTAAACTACCATCAAACATCGCGGATATTGCCAACACAGCTGTAACGCTTTTGGTATTGCTCGGTGTTGTCA
CAGATCCAACCACAAAAGGCCTGTCAGACAGTGAGCAAGCATTGACTTACCACGAACCAAAACAATAG

Upstream 100 bases:

>100_bases
ACGCTGAGCAAAATAAAACGTTGATTACAATGACAGAGCAAATTAAAAATTTAACAGATGATGTTAAAGATTTAAAAGAT
ATGATGAGAGGAGAAATCAA

Downstream 100 bases:

>100_bases
GAGGAGCCATGCGAGCAATCACACGATTAGCATTAGTTATAGCAATCGCAATACTGTATGTGCCGATATCTGTTGTTGCT
CTGATCTTTTATCCATTTTT

Product: holin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MINLKLRLQNKVTLMAILGAIFLLAQQLGIKLPSNIADIANTAVTLLVLLGVVTDPTTKGLSDSEQALTYHEPKQ

Sequences:

>Translated_75_residues
MINLKLRLQNKVTLMAILGAIFLLAQQLGIKLPSNIADIANTAVTLLVLLGVVTDPTTKGLSDSEQALTYHEPKQ
>Mature_75_residues
MINLKLRLQNKVTLMAILGAIFLLAQQLGIKLPSNIADIANTAVTLLVLLGVVTDPTTKGLSDSEQALTYHEPKQ

Specific function: Unknown

COG id: COG5546

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8084; Mature: 8084

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLKLRLQNKVTLMAILGAIFLLAQQLGIKLPSNIADIANTAVTLLVLLGVVTDPTTKG
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LSDSEQALTYHEPKQ
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MINLKLRLQNKVTLMAILGAIFLLAQQLGIKLPSNIADIANTAVTLLVLLGVVTDPTTKG
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LSDSEQALTYHEPKQ
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA