Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893754
Identifier: 71893754
GI number: 71893754
Start: 490301
End: 491680
Strand: Reverse
Name: 71893754
Synonym: MHJ_0403
Alternate gene names: NA
Gene position: 491680-490301 (Counterclockwise)
Preceding gene: 71893761
Following gene: 71893750
Centisome position: 54.79
GC content: 26.09
Gene sequence:
>1380_bases ATGAATTGAAACCAGGACCAAAATAAGGCAAACTCTAAATTTAAGGAGGCAAAACAATCAAATTTTTTCATCCCTAGAAA CCCTAGTCAAAACAGTAATATCAAAAGTCAAAATAGTAATTTTGCCTCCCGCGACCGTAATTATCAGCAAAATAGCAACT TTCAAAAAGCAAATTATGTAAAAGAACAAAAATTAAGCAACCCTAACCCATTTGATGGAAACATTCAGGAAGCTGAAGTT AATTTAAATCAAAATGAAATTGAGGCAAAAAATAGTCCTGAATATTATAGTCAGACTAAAAATAGTGCAAATTATGCAAA TTATTTGGAAAATAGAACTACATTTCAAGCAGGACAGGATAAACAAGAAAAAAATATAAATAATGTGTTTGTCGAGCCAA AAAAAACTACAAAAAAGGTAAAAAAAAACTATTCAAACCTGTTACATGAAGATGAAAATCAATTCTTTAATTATCTTGCC GATACAAAATCAGTTGTTGAAATTTCTGATCTAAACGCAAAAATGAATTATCGCGAACAACATACAAGCTGGATCAATAG TTTTTATCAACTAAATTTTGAAATTTTTCAAAAACATGAAAAAACTCTAGAAAAAAAGCTAAATCCCCTTGAAAAGCTTT GAAAAAATATTTCTTTTACGGCAAAATCGGTCTATTATACAATTATAACCTTTTTTGTCTCATTTTTGATGTTAATCTTT TGATTAATTTTTGCTGGTTTTGGTAATTTTATTTTTTGACCATATATCGTATTTGTTAGTTCTTTTATCGCCTTTTTGAT GATTATTCAAGTTCTAATTTATTTTAATAATTCCAAAAATCGGCAAAAAAGCCAAAAAATTATATTTTATTATATTTTAG ACTCGTCTTTTTTATTAACCAACTATTTAGTAAGACTAATTTTTTTATTAAGCCCACTTTTTACCGATAAATTAATATTT TTTATCATAAACGAAAATATTTTAAAGATAACTAATAATTATATCGAAATTCTATATTATATTTCTTGATTTCCTACATT GAGTTATTTCTTTGGAATTTGTTTTTTTATACCGATTAAATGATCGGAATGCGTTAAAAATTTTTGACTCACATTTGGAA TTTTTAAAATTTTTTCTTATCTTAATTTAGTCAAGGAATACCGAATAAAAGTTGTTGATGAAACCTTACGCAAAAAATTA AATGCAAAATGGTGTAATCTATATCAAATTGGGCGACCACTTAGTAACTCGCTCCATCCTGCCTTTATTTATGCATATAA TGTAATAAAAACTAATCCAAATTTACCAATTGAAGAACAAGATAAGCTAGTTGGTTTTGTTTTTAATTCTGTTAGTAATG ATATGAAAAAATATTACTAG
Upstream 100 bases:
>100_bases TGCCCAAAAATTAGGCTAACTTAATCAGCTATTTATGGTAAAATTAAATAAAATAAAATAAAATAGTAAACAAGTAAAAA ATTGAGGAAAAAGGGGTTTT
Downstream 100 bases:
>100_bases TTTTTCTTAGTTTTATATTTCCTGTTTTTTAAATTTTTGCAAAAAAATTAATGTTTTTTGCAAAAATTCCCATATTTTTT AAAAAAATATGGGCATTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MNWNQDQNKANSKFKEAKQSNFFIPRNPSQNSNIKSQNSNFASRDRNYQQNSNFQKANYVKEQKLSNPNPFDGNIQEAEV NLNQNEIEAKNSPEYYSQTKNSANYANYLENRTTFQAGQDKQEKNINNVFVEPKKTTKKVKKNYSNLLHEDENQFFNYLA DTKSVVEISDLNAKMNYREQHTSWINSFYQLNFEIFQKHEKTLEKKLNPLEKLWKNISFTAKSVYYTIITFFVSFLMLIF WLIFAGFGNFIFWPYIVFVSSFIAFLMIIQVLIYFNNSKNRQKSQKIIFYYILDSSFLLTNYLVRLIFLLSPLFTDKLIF FIINENILKITNNYIEILYYISWFPTLSYFFGICFFIPIKWSECVKNFWLTFGIFKIFSYLNLVKEYRIKVVDETLRKKL NAKWCNLYQIGRPLSNSLHPAFIYAYNVIKTNPNLPIEEQDKLVGFVFNSVSNDMKKYY
Sequences:
>Translated_459_residues MN*NQDQNKANSKFKEAKQSNFFIPRNPSQNSNIKSQNSNFASRDRNYQQNSNFQKANYVKEQKLSNPNPFDGNIQEAEV NLNQNEIEAKNSPEYYSQTKNSANYANYLENRTTFQAGQDKQEKNINNVFVEPKKTTKKVKKNYSNLLHEDENQFFNYLA DTKSVVEISDLNAKMNYREQHTSWINSFYQLNFEIFQKHEKTLEKKLNPLEKL*KNISFTAKSVYYTIITFFVSFLMLIF *LIFAGFGNFIF*PYIVFVSSFIAFLMIIQVLIYFNNSKNRQKSQKIIFYYILDSSFLLTNYLVRLIFLLSPLFTDKLIF FIINENILKITNNYIEILYYIS*FPTLSYFFGICFFIPIK*SECVKNF*LTFGIFKIFSYLNLVKEYRIKVVDETLRKKL NAKWCNLYQIGRPLSNSLHPAFIYAYNVIKTNPNLPIEEQDKLVGFVFNSVSNDMKKYY >Mature_459_residues MN*NQDQNKANSKFKEAKQSNFFIPRNPSQNSNIKSQNSNFASRDRNYQQNSNFQKANYVKEQKLSNPNPFDGNIQEAEV NLNQNEIEAKNSPEYYSQTKNSANYANYLENRTTFQAGQDKQEKNINNVFVEPKKTTKKVKKNYSNLLHEDENQFFNYLA DTKSVVEISDLNAKMNYREQHTSWINSFYQLNFEIFQKHEKTLEKKLNPLEKL*KNISFTAKSVYYTIITFFVSFLMLIF *LIFAGFGNFIF*PYIVFVSSFIAFLMIIQVLIYFNNSKNRQKSQKIIFYYILDSSFLLTNYLVRLIFLLSPLFTDKLIF FIINENILKITNNYIEILYYIS*FPTLSYFFGICFFIPIK*SECVKNF*LTFGIFKIFSYLNLVKEYRIKVVDETLRKKL NAKWCNLYQIGRPLSNSLHPAFIYAYNVIKTNPNLPIEEQDKLVGFVFNSVSNDMKKYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53337; Mature: 53337
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNQDQNKANSKFKEAKQSNFFIPRNPSQNSNIKSQNSNFASRDRNYQQNSNFQKANYVK CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHH EQKLSNPNPFDGNIQEAEVNLNQNEIEAKNSPEYYSQTKNSANYANYLENRTTFQAGQDK HHHCCCCCCCCCCCCCEEECCCHHHCCCCCCCHHHHHCCCCCHHHHHHHCCCHHCCCCCH QEKNINNVFVEPKKTTKKVKKNYSNLLHEDENQFFNYLADTKSVVEISDLNAKMNYREQH HHCCCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEECCCCCCCCHHHHH TSWINSFYQLNFEIFQKHEKTLEKKLNPLEKLKNISFTAKSVYYTIITFFVSFLMLIFLI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FAGFGNFIFPYIVFVSSFIAFLMIIQVLIYFNNSKNRQKSQKIIFYYILDSSFLLTNYLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHH RLIFLLSPLFTDKLIFFIINENILKITNNYIEILYYISFPTLSYFFGICFFIPIKSECVK HHHHHHHHHHHHHEEEEEECCCHHHHHHHHEEEHEEECCHHHHHHHHHHHHHCCHHHHHH NFLTFGIFKIFSYLNLVKEYRIKVVDETLRKKLNAKWCNLYQIGRPLSNSLHPAFIYAYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEE VIKTNPNLPIEEQDKLVGFVFNSVSNDMKKYY EEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNQDQNKANSKFKEAKQSNFFIPRNPSQNSNIKSQNSNFASRDRNYQQNSNFQKANYVK CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHH EQKLSNPNPFDGNIQEAEVNLNQNEIEAKNSPEYYSQTKNSANYANYLENRTTFQAGQDK HHHCCCCCCCCCCCCCEEECCCHHHCCCCCCCHHHHHCCCCCHHHHHHHCCCHHCCCCCH QEKNINNVFVEPKKTTKKVKKNYSNLLHEDENQFFNYLADTKSVVEISDLNAKMNYREQH HHCCCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEECCCCCCCCHHHHH TSWINSFYQLNFEIFQKHEKTLEKKLNPLEKLKNISFTAKSVYYTIITFFVSFLMLIFLI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FAGFGNFIFPYIVFVSSFIAFLMIIQVLIYFNNSKNRQKSQKIIFYYILDSSFLLTNYLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHH RLIFLLSPLFTDKLIFFIINENILKITNNYIEILYYISFPTLSYFFGICFFIPIKSECVK HHHHHHHHHHHHHEEEEEECCCHHHHHHHHEEEHEEECCHHHHHHHHHHHHHCCHHHHHH NFLTFGIFKIFSYLNLVKEYRIKVVDETLRKKLNAKWCNLYQIGRPLSNSLHPAFIYAYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEE VIKTNPNLPIEEQDKLVGFVFNSVSNDMKKYY EEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA